Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0040017 Camellia sinensis var. sinensis HOM05D006659 ORTHO05D008372 9.0e-137 490.3 265 100.0
CSS0046315 Camellia sinensis var. sinensis HOM05D006659 ORTHO05D008372 2.4e-129 465.7 266 95.5
CiPaw.01G100500 Carya illinoinensis HOM05D006659 ORTHO05D008372 1.9e-86 323.2 274 66.1
QL10p048762 Quercus lobata HOM05D006659 ORTHO05D008372 1.6e-85 320.1 272 66.5
TPR.G34236 Trifolium pratense HOM05D006659 ORTHO05D008372 1.6e-85 320.1 269 66.9
Haze_01513 Corylus avellana HOM05D006659 ORTHO05D008372 1.8e-84 316.6 267 65.2
Manes.11G120400 Manihot esculenta HOM05D006659 ORTHO05D008372 1.2e-83 313.9 280 64.3
Duzib151G0383 Durio zibethinus HOM05D006659 ORTHO05D008372 1.5e-83 313.5 270 64.8
Medtr4g067150 Medicago truncatula HOM05D006659 ORTHO05D008372 7.5e-83 311.2 273 67.0
Potri.007G128200 Populus trichocarpa HOM05D006659 ORTHO05D008372 8.3e-82 307.8 269 65.8
Cc03_g13110 Coffea canephora HOM05D006659 ORTHO05D008372 1.1e-81 307.4 273 67.0
TAR362G1327 Trochodendron aralioides HOM05D006659 ORTHO05D008372 4.6e-80 302.0 267 65.2
Potri.017G030100 Populus trichocarpa HOM05D006659 ORTHO05D008372 1.7e-79 300.1 275 65.5
Lalb_Chr03g0026131 Lupinus albus HOM05D006659 ORTHO05D008372 3.0e-79 299.3 270 60.7
Prupe.1G193000 Prunus persica HOM05D006659 ORTHO05D008372 5.0e-79 298.5 273 63.0
GSVIVG01010754001 Vitis vinifera HOM05D006659 ORTHO05D008372 6.6e-79 298.1 226 68.6
MSTRG.24582 Avicennia marina HOM05D006659 ORTHO05D008372 4.3e-78 295.4 267 59.2
TWI14G0225 Tripterygium wilfordii HOM05D006659 ORTHO05D008372 5.6e-78 295.0 269 65.4
TWI39G0181 Tripterygium wilfordii HOM05D006659 ORTHO05D008372 5.6e-78 295.0 269 65.4
VMungo1127G1494 Vigna mungo HOM05D006659 ORTHO05D008372 7.3e-78 294.7 270 60.7
Sabra17G0019600 Salix brachista HOM05D006659 ORTHO05D008372 9.5e-78 294.3 285 60.7
Dinv44193 Davidia involucrata HOM05D006659 ORTHO05D008372 1.2e-77 293.9 210 73.8
Lj3g0013401 Lotus japonicus HOM05D006659 ORTHO05D008372 1.6e-77 293.5 276 58.3
Dinv22730 Davidia involucrata HOM05D006659 ORTHO05D008372 3.6e-77 292.4 244 68.9
Rhsim09G0027800 Rhododendron simsii HOM05D006659 ORTHO05D008372 1.4e-76 290.4 271 60.5
Gohir.A09G211000 Gossypium hirsutum HOM05D006659 ORTHO05D008372 5.2e-76 288.5 269 63.9
Ca_20785_v3 Cicer arietinum L. HOM05D006659 ORTHO05D008372 6.8e-76 288.1 267 64.0
Thecc.04G179900 Theobroma cacao HOM05D006659 ORTHO05D008372 8.9e-76 287.7 267 64.0
RhsimUnG0221100 Rhododendron simsii HOM05D006659 ORTHO05D008372 1.2e-75 287.3 271 60.1
Aqoxy2G04093 Aquilegia oxysepala HOM05D006659 ORTHO05D008372 4.4e-75 285.4 231 68.8
Duzib212G0569 Durio zibethinus HOM05D006659 ORTHO05D008372 7.5e-75 284.6 272 63.6
Oeu053837.1 Olea europaea HOM05D006659 ORTHO05D008372 7.5e-75 284.6 275 58.9
Psat7g214800 Pisum sativum HOM05D006659 ORTHO05D008372 7.5e-75 284.6 266 61.7
Gohir.D09G204400 Gossypium hirsutum HOM05D006659 ORTHO05D008372 1.7e-74 283.5 269 64.3
arahy.Tifrunner.gnm1.ann1.AVW0M7 Arachis hypogaea HOM05D006659 ORTHO05D008372 2.2e-74 283.1 277 57.4
Glyma.12G052500 Glycine max HOM05D006659 ORTHO05D008372 2.2e-74 283.1 275 59.3
Lalb_Chr01g0003161 Lupinus albus HOM05D006659 ORTHO05D008372 3.7e-74 282.3 272 60.3
arahy.Tifrunner.gnm1.ann1.Q6M2DC Arachis hypogaea HOM05D006659 ORTHO05D008372 6.4e-74 281.6 277 57.4
Sabra07G0104600 Salix brachista HOM05D006659 ORTHO05D008372 6.4e-74 281.6 266 62.8
Phvul.011G054500 Phaseolus vulgaris HOM05D006659 ORTHO05D008372 8.3e-74 281.2 270 59.6
Cpa.g.sc9.272 Carica papaya HOM05D006659 ORTHO05D008372 7.0e-73 278.1 199 71.9
Gorai.006G228300 Gossypium raimondii HOM05D006659 ORTHO05D008372 7.0e-73 278.1 271 63.1
Nitab4.5_0008969g0010 Nicotiana tabacum HOM05D006659 ORTHO05D008372 2.7e-72 276.2 226 66.4
Gohir.A10G137100 Gossypium hirsutum HOM05D006659 ORTHO05D008372 4.6e-72 275.4 198 69.7
Gohir.D10G129500 Gossypium hirsutum HOM05D006659 ORTHO05D008372 4.6e-72 275.4 198 69.7
Gorai.011G142800 Gossypium raimondii HOM05D006659 ORTHO05D008372 4.6e-72 275.4 198 69.7
Actinidia35977 Actinidia chinensis HOM05D006659 ORTHO05D008372 6.0e-72 275.0 257 62.6
MD04G1040300 Malus domestica HOM05D006659 ORTHO05D008372 6.0e-72 275.0 273 58.6
Lsat_1_v5_gn_1_120661 Lactuca sativa HOM05D006659 ORTHO05D008372 2.3e-71 273.1 268 58.6
PGR083G0301 Punica granatum HOM05D006659 ORTHO05D008372 3.0e-71 272.7 288 58.3
COL.COLO4_07662 Corchorus olitorius HOM05D006659 ORTHO05D008372 3.9e-71 272.3 187 72.2
MBI08_g14954_MAGBIO Magnolia biondii HOM05D006659 ORTHO05D008064 6.6e-71 271.6 247 63.6
RcHm_v2.0_Chr4g0406801 Rosa chinensis HOM05D006659 ORTHO05D008372 6.6e-71 271.6 201 68.7
ClCG08G004640 Citrullus lanatus HOM05D006659 ORTHO05D008372 4.3e-70 268.9 273 59.0
Ciclev10021505m.g Citrus clementina HOM05D006659 ORTHO05D008372 9.5e-70 267.7 305 58.0
PGSC0003DMG400027013 Solanum tuberosum HOM05D006659 ORTHO05D008372 8.1e-69 264.6 269 61.3
Atru.chr3.1492 Acer truncatum HOM05D006659 ORTHO05D008372 1.4e-68 263.8 240 62.1
Cfa015167 Carpinus fangiana HOM05D006659 ORTHO05D008372 1.8e-68 263.5 182 72.5
ECA248G3871 Erigeron canadensis HOM05D006659 ORTHO05D008372 2.3e-68 263.1 282 58.5
Sopen06g029650 Solanum pennellii HOM05D006659 ORTHO05D008372 8.9e-68 261.2 270 61.5
CANSAT78G0008 Cannabis sativa HOM05D006659 ORTHO05D008372 1.2e-67 260.8 196 71.4
THA.LOC104803695 Tarenaya hassleriana HOM05D006659 ORTHO05D008372 1.2e-67 260.8 270 57.8
Migut.N03108 Erythranthe guttata HOM05D006659 ORTHO05D008372 3.4e-67 259.2 201 67.2
Lj6C54T1 Lonicera japonica HOM05D006659 ORTHO05D008372 4.4e-67 258.8 194 67.5
PSO675G8713 Papaver somniferum HOM05D006659 ORTHO05D008372 4.4e-67 258.8 282 55.0
Solyc06g073290.1 Solanum lycopersicum HOM05D006659 ORTHO05D008372 7.5e-67 258.1 270 61.1
HanXRQChr01g0004971 Helianthus annuus HOM05D006659 ORTHO05D008372 1.3e-66 257.3 226 65.5
MELO3C011657.2 Cucumis melo HOM05D006659 ORTHO05D008372 1.7e-66 256.9 265 55.5
CsaV3_6G003920 Cucumis sativus L. HOM05D006659 ORTHO05D008372 2.2e-66 256.5 276 56.2
THA.LOC104802307 Tarenaya hassleriana HOM05D006659 ORTHO05D008372 2.2e-66 256.5 255 56.9
SalBow6G0037 Salvia bowleyana HOM05D006659 ORTHO05D008372 3.7e-66 255.8 268 59.7
Sed0004224 Sechium edule HOM05D006659 ORTHO05D008372 4.9e-66 255.4 270 55.6
PSO017G5731 Papaver somniferum HOM05D006659 ORTHO05D008372 6.4e-66 255.0 282 58.2
ATR0824G177 Amborella trichopoda HOM05D006659 ORTHO05D008372 8.3e-66 254.6 197 66.0
FvH4_4g10790 Fragaria vesca HOM05D006659 ORTHO05D008372 1.9e-65 253.4 297 53.9
FAN12G1956 Fragaria x ananassa HOM05D006659 ORTHO05D008372 1.9e-65 253.4 298 54.4
Manes.04G042918 Manihot esculenta HOM05D006659 ORTHO05D008372 1.9e-65 253.4 278 57.9
BcaC07g40458 Brassica carinata HOM05D006659 ORTHO05D008372 1.0e-63 247.7 267 55.1
FAN07G0020 Fragaria x ananassa HOM05D006659 ORTHO05D008372 1.7e-63 246.9 229 59.0
unitig_578.g16263 Utricularia gibba HOM05D006659 ORTHO05D008372 5.1e-63 245.4 202 63.9
Aa31LG10G13750 Aethionema arabicum HOM05D006659 ORTHO05D008372 6.6e-63 245.0 266 54.9
Sed0027988 Sechium edule HOM05D006659 ORTHO05D008372 8.6e-63 244.6 261 54.4
CAN.G65.172 Capsicum annuum HOM05D006659 ORTHO05D008372 1.1e-62 244.2 198 64.1
A09p51640 Brassica napus HOM05D006659 ORTHO05D008372 1.9e-62 243.4 268 53.0
Zm00001eb406810 Zea mays HOM05D006659 ORTHO05D008372 7.3e-62 241.5 194 60.8
BcaB02g07470 Brassica carinata HOM05D006659 ORTHO05D008372 3.6e-61 239.2 271 54.2
Ah.07g201990 Amaranthus hybridus HOM05D006659 ORTHO05D008372 4.7e-61 238.8 201 61.2
EL10Ac3g05931 Beta vulgaris HOM05D006659 ORTHO05D008372 4.7e-61 238.8 287 50.2
Os11g0267000 Oryza sativa ssp. japonica HOM05D006659 ORTHO05D008372 6.2e-61 238.4 287 52.3
Glyma.11G127800 Glycine max HOM05D006659 ORTHO05D008372 1.1e-60 237.7 224 60.3
BraA09t40604Z Brassica rapa HOM05D006659 ORTHO05D008372 4.0e-60 235.7 265 51.3
BcaC07g40279 Brassica carinata HOM05D006659 ORTHO05D008372 8.9e-60 234.6 267 52.1
C08p34410 Brassica napus HOM05D006659 ORTHO05D008372 8.9e-60 234.6 267 52.1
BolC8t51042H Brassica oleracea HOM05D006659 ORTHO05D008372 8.9e-60 234.6 267 52.1
SGA_v2.0_scaffold31G12575 Striga asiatica HOM05D006659 ORTHO05D008372 2.0e-59 233.4 234 56.0
BolC6t37777H Brassica oleracea HOM05D006659 ORTHO05D008372 7.6e-59 231.5 267 50.6
BcaC08g44982 Brassica carinata HOM05D006659 ORTHO05D008372 9.9e-59 231.1 267 50.2
A07p24640 Brassica napus HOM05D006659 ORTHO05D008372 1.7e-58 230.3 267 51.3
C06p26120 Brassica napus HOM05D006659 ORTHO05D008372 2.2e-58 229.9 267 50.2
CARHR169790 Cardamine hirsuta HOM05D006659 ORTHO05D008372 8.4e-58 228.0 268 51.9
Carub.0005s2614 Capsella rubella HOM05D006659 ORTHO05D008372 1.9e-57 226.9 256 54.7
AUR62015391 Chenopodium quinoa HOM05D006283 ORTHO05D007727 2.4e-57 226.5 216 57.4
AT3G59400 Arabidopsis thaliana HOM05D006659 ORTHO05D008372 3.2e-57 226.1 196 60.2
AL5G41300 Arabidopsis lyrata HOM05D006659 ORTHO05D008372 4.2e-57 225.7 274 52.6
BraA07t30109Z Brassica rapa HOM05D006659 ORTHO05D008372 1.6e-56 223.8 268 50.4
Thhalv10006183m.g Eutrema salsugineum HOM05D006659 ORTHO05D008372 3.9e-55 219.2 274 51.5
Sp5g03740 Schrenkiella parvula HOM05D006659 ORTHO05D008372 1.1e-54 217.6 276 47.5
SEGI_36451 Sequoiadendron giganteum HOM05D006659 ORTHO05D008372 1.8e-52 210.3 152 63.8
VMungo1309G1939 Vigna mungo HOM05D006659 ORTHO05D008372 3.2e-49 199.5 264 48.1
Pp3c25_4400 Physcomitrium patens HOM05D006659 ORTHO05D008372 1.4e-44 184.1 157 56.7
Pp3c6_11210 Physcomitrium patens HOM05D006659 ORTHO05D008372 4.0e-44 182.6 157 56.7
SMO170G0079 Selaginella moellendorffii HOM05D006659 ORTHO05D008372 4.0e-44 182.6 157 54.8
AagrBONN_evm.TU.Sc2ySwM_228.5135 Anthoceros agrestis HOM05D006659 ORTHO05D008372 6.9e-44 181.8 157 54.8
Mapoly0173s0019 Marchantia polymorpha HOM05D006659 ORTHO05D008372 6.9e-44 181.8 170 52.9
Peaxi162Scf00413g00827 Petunia axillaris HOM05D006659 ORTHO05D008372 1.3e-42 177.6 275 50.2
CDE04G1206 Ceratophyllum demersum HOM05D006659 ORTHO05D008372 2.5e-38 163.3 144 56.9
CBR_g10809 Chara braunii HOM05D006659 ORTHO05D008372 1.3e-37 161.0 211 42.7
Cre05.g246800 Chlamydomonas reinhardtii HOM05D006659 ORTHO05D008372 3.1e-36 156.4 148 52.0
PRCOL_00006170 Prasinoderma coloniale HOM05D006659 ORTHO05D008372 6.0e-32 142.1 155 44.5
MCO04G521 Micromonas commoda HOM05D006659 ORTHO05D008372 1.5e-30 137.5 189 41.3
Oeu053835.1 Olea europaea HOM05D006659 ORTHO05D008372 5.3e-28 129.0 121 58.7
Eucgr.H00371 Eucalyptus grandis HOM05D006659 ORTHO05D008372 1.7e-26 124.0 109 59.6


User provided reference genes

Program Settings