Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0040013 Camellia sinensis var. sinensis HOM05D005052 ORTHO05D006226 5.7e-56 220.7 114 100.0
vmacro22193 Vaccinium macrocarpon HOM05D005052 ORTHO05D006226 9.0e-17 90.5 132 48.5
vmacro18426 Vaccinium macrocarpon HOM05D005052 ORTHO05D006226 7.6e-16 87.4 113 52.2
Actinidia28717 Actinidia chinensis HOM05D005052 ORTHO05D006226 1.3e-12 76.6 122 49.2
TAR381G1626 Trochodendron aralioides HOM05D005052 ORTHO05D006226 3.9e-12 75.1 122 45.1
Oeu048477.1 Olea europaea HOM05D005052 ORTHO05D006226 6.7e-12 74.3 123 42.3
CANSAT25G2560 Cannabis sativa HOM05D005052 ORTHO05D006226 8.7e-12 73.9 108 44.4
CiPaw.08G130500 Carya illinoinensis HOM05D005052 ORTHO05D006226 1.1e-11 73.6 120 43.3
Lj4A222T51 Lonicera japonica HOM05D005052 ORTHO05D006226 1.5e-11 73.2 119 50.4
QL06p051082 Quercus lobata HOM05D005052 ORTHO05D006226 1.5e-11 73.2 115 47.0
Dinv40116 Davidia involucrata HOM05D005052 ORTHO05D006226 1.9e-11 72.8 116 46.6
ClCG10G000590 Citrullus lanatus HOM05D005052 ORTHO05D006226 7.4e-11 70.9 96 44.8
MD15G1242600 Malus domestica HOM05D005052 ORTHO05D006226 7.4e-11 70.9 126 42.9
Nn1g06262 Nelumbo nucifera HOM05D005052 ORTHO05D006226 7.4e-11 70.9 126 43.7
Potri.005G110900 Populus trichocarpa HOM05D005052 ORTHO05D006226 1.3e-10 70.1 110 46.4
PSO675G6089 Papaver somniferum HOM05D005052 ORTHO05D006226 2.8e-10 68.9 87 48.3
MELO3C013755.2 Cucumis melo HOM05D005052 ORTHO05D006226 3.6e-10 68.6 96 42.7
Manes.02G107200 Manihot esculenta HOM05D005052 ORTHO05D006226 3.6e-10 68.6 97 44.3
PSO541G6199 Papaver somniferum HOM05D005052 ORTHO05D006226 3.6e-10 68.6 87 48.3
TWI53G1960 Tripterygium wilfordii HOM05D005052 ORTHO05D006226 3.6e-10 68.6 108 44.4
CsaV3_3G000670 Cucumis sativus L. HOM05D005052 ORTHO05D006226 4.8e-10 68.2 101 43.6
Prupe.7G171600 Prunus persica HOM05D005052 ORTHO05D006226 4.8e-10 68.2 126 41.3
CiPaw.07G061100 Carya illinoinensis HOM05D005052 ORTHO05D006226 8.1e-10 67.4 110 41.8
Dinv33662 Davidia involucrata HOM05D005052 ORTHO05D006226 8.1e-10 67.4 123 43.1
Eucgr.J02467 Eucalyptus grandis HOM05D005052 ORTHO05D006226 1.8e-09 66.2 118 43.2
Lsat_1_v5_gn_3_125660 Lactuca sativa HOM05D005052 ORTHO05D006226 2.4e-09 65.9 113 40.7
Migut.C00533 Erythranthe guttata HOM05D005052 ORTHO05D006226 3.1e-09 65.5 115 43.5
Aqoxy4G02022 Aquilegia oxysepala HOM05D005052 ORTHO05D006226 4.0e-09 65.1 81 48.1
PGR102G0465 Punica granatum HOM05D005052 ORTHO05D006226 4.0e-09 65.1 105 42.9
Sabra05G0090900 Salix brachista HOM05D005052 ORTHO05D006226 4.0e-09 65.1 99 46.5
CAN.G1274.31 Capsicum annuum HOM05D005052 ORTHO05D006226 5.3e-09 64.7 112 42.9
GSVIVG01018732001 Vitis vinifera HOM05D005052 ORTHO05D006226 5.3e-09 64.7 126 42.1
Lalb_Chr09g0321611 Lupinus albus HOM05D005052 ORTHO05D006226 6.9e-09 64.3 35 82.9
Nn5g28565 Nelumbo nucifera HOM05D005052 ORTHO05D006226 9.0e-09 63.9 115 40.9
Atru.chr3.855 Acer truncatum HOM05D005052 ORTHO05D006226 1.5e-08 63.2 94 41.5
MSTRG.2728 Avicennia marina HOM05D005052 ORTHO05D006226 1.5e-08 63.2 117 43.6
Cfa007001 Carpinus fangiana HOM05D005052 ORTHO05D006226 1.5e-08 63.2 119 42.0
Actinidia22954 Actinidia chinensis HOM05D005052 ORTHO05D006226 2.0e-08 62.8 35 80.0
Nitab4.5_0008943g0020 Nicotiana tabacum HOM05D005052 ORTHO05D006226 2.0e-08 62.8 110 41.8
Cpa.g.sc6.286 Carica papaya HOM05D005052 ORTHO05D006226 2.6e-08 62.4 95 43.2
Lalb_Chr05g0212261 Lupinus albus HOM05D005052 ORTHO05D006226 2.6e-08 62.4 116 44.8
Rhsim08G0032100 Rhododendron simsii HOM05D005052 ORTHO05D006226 2.6e-08 62.4 35 80.0
SGA_v2.0_scaffold94G28549 Striga asiatica HOM05D005052 ORTHO05D006226 2.6e-08 62.4 117 41.0
DCAR_004732 Daucus carota HOM05D005052 ORTHO05D006226 3.4e-08 62.0 61 49.2
Duzib147G0491 Durio zibethinus HOM05D005052 ORTHO05D006226 3.4e-08 62.0 109 45.0
ECA240G3065 Erigeron canadensis HOM05D005052 ORTHO05D006226 3.4e-08 62.0 106 42.5
Medtr5g022580 Medicago truncatula HOM05D005052 ORTHO05D006226 3.4e-08 62.0 65 52.3
Nitab4.5_0001892g0080 Nicotiana tabacum HOM05D005052 ORTHO05D006226 3.4e-08 62.0 110 41.8
arahy.Tifrunner.gnm1.ann1.1KVD1S Arachis hypogaea HOM05D005052 ORTHO05D006226 5.8e-08 61.2 111 40.5
arahy.Tifrunner.gnm1.ann1.PYN71E Arachis hypogaea HOM05D005052 ORTHO05D006226 5.8e-08 61.2 111 40.5
Sed0003793 Sechium edule HOM05D005052 ORTHO05D006226 5.8e-08 61.2 114 36.0
TPR.G10542 Trifolium pratense HOM05D005052 ORTHO05D006226 5.8e-08 61.2 110 41.8
Ca_24920_v3 Cicer arietinum L. HOM05D005052 ORTHO05D006226 7.6e-08 60.8 114 41.2
Haze_03731 Corylus avellana HOM05D005052 ORTHO05D006226 7.6e-08 60.8 33 78.8
BolC9t54093H Brassica oleracea HOM05D005052 ORTHO05D006226 9.9e-08 60.5 105 42.9
Gorai.007G192400 Gossypium raimondii HOM05D005052 ORTHO05D006226 9.9e-08 60.5 33 81.8
Phvul.002G106700 Phaseolus vulgaris HOM05D005052 ORTHO05D006226 9.9e-08 60.5 110 40.9
SalBow3G4284 Salvia bowleyana HOM05D005052 ORTHO05D006226 9.9e-08 60.5 112 36.6
unitig_699.g19703 Utricularia gibba HOM05D005052 ORTHO05D006226 9.9e-08 60.5 36 75.0
Aa31LG1G14600 Aethionema arabicum HOM05D005052 ORTHO05D006226 1.3e-07 60.1 35 77.1
DCAR_022909 Daucus carota HOM05D005052 ORTHO05D006226 1.3e-07 60.1 91 40.7
RcHm_v2.0_Chr2g0099021 Rosa chinensis HOM05D005052 ORTHO05D006226 1.3e-07 60.1 107 42.1
COL.COLO4_22462 Corchorus olitorius HOM05D005052 ORTHO05D006226 1.7e-07 59.7 111 40.5
Gohir.A12G058900 Gossypium hirsutum HOM05D005052 ORTHO05D006226 1.7e-07 59.7 104 44.2
Gohir.D12G058900 Gossypium hirsutum HOM05D005052 ORTHO05D006226 2.2e-07 59.3 105 41.0
Os09g0539100 Oryza sativa ssp. japonica HOM05D005052 ORTHO05D006226 2.2e-07 59.3 38 68.4
BcaC04g23113 Brassica carinata HOM05D005052 ORTHO05D006226 2.9e-07 58.9 107 41.1
C09p12030 Brassica napus HOM05D005052 ORTHO05D006226 2.9e-07 58.9 107 41.1
Glyma.11G078700 Glycine max HOM05D005052 ORTHO05D006226 2.9e-07 58.9 36 72.2
Gohir.A11G173500 Gossypium hirsutum HOM05D005052 ORTHO05D006226 2.9e-07 58.9 33 78.8
HanXRQChr13g0424561 Helianthus annuus HOM05D005052 ORTHO05D006226 2.9e-07 58.9 113 40.7
Hma1.2p1_0315F.1_g122330 Hydrangea macrophylla HOM05D005052 ORTHO05D006226 2.9e-07 58.9 33 78.8
Hund16503 Selenicereus undatus HOM05D005052 ORTHO05D006226 2.9e-07 58.9 34 76.5
Thecc.01G014600 Theobroma cacao HOM05D005052 ORTHO05D006226 2.9e-07 58.9 112 42.0
BcaB04g20124 Brassica carinata HOM05D005052 ORTHO05D006226 3.8e-07 58.5 106 39.6
Psat2g153160 Pisum sativum HOM05D005052 ORTHO05D006226 3.8e-07 58.5 110 40.0
ATR0712G043 Amborella trichopoda HOM05D005052 ORTHO05D006226 4.9e-07 58.2 109 38.5
AagrBONN_evm.TU.Sc2ySwM_340.387 Anthoceros agrestis HOM05D005052 ORTHO05D006226 4.9e-07 58.2 29 86.2
EL10Ac6g15523 Beta vulgaris HOM05D005052 ORTHO05D006226 4.9e-07 58.2 34 76.5
AUR62003338 Chenopodium quinoa HOM05D005052 ORTHO05D006226 4.9e-07 58.2 34 76.5
AUR62029500 Chenopodium quinoa HOM05D005052 ORTHO05D006226 4.9e-07 58.2 34 76.5
THA.LOC104821339 Tarenaya hassleriana HOM05D005052 ORTHO05D006226 6.4e-07 57.8 33 75.8
VMungo1215G2918 Vigna mungo HOM05D005052 ORTHO05D006226 6.4e-07 57.8 113 38.1
Zm00001eb103800 Zea mays HOM05D005052 ORTHO05D006226 6.4e-07 57.8 34 73.5
Zm00001eb331970 Zea mays HOM05D005052 ORTHO05D006226 6.4e-07 57.8 34 73.5
Ah.03g149130 Amaranthus hybridus HOM05D005052 ORTHO05D006226 8.4e-07 57.4 107 41.1
Glyma.01G164300 Glycine max HOM05D005052 ORTHO05D006226 8.4e-07 57.4 36 69.4
Gorai.008G062200 Gossypium raimondii HOM05D005052 ORTHO05D006226 8.4e-07 57.4 106 40.6
Sc03g0003700 Simmondsia chinensis HOM05D005052 ORTHO05D006226 8.4e-07 57.4 106 39.6
CARHR281630 Cardamine hirsuta HOM05D005052 ORTHO05D006226 1.1e-06 57.0 68 45.6
Lj2g0011110 Lotus japonicus HOM05D005052 ORTHO05D006226 1.1e-06 57.0 108 42.6
TWI09G1579 Tripterygium wilfordii HOM05D005052 ORTHO05D006226 1.1e-06 57.0 111 38.7
Carub.0008s2837 Capsella rubella HOM05D005052 ORTHO05D006226 1.4e-06 56.6 33 72.7
A09p10150 Brassica napus HOM05D005052 ORTHO05D006226 1.9e-06 56.2 107 40.2
BraA09t36659Z Brassica rapa HOM05D005052 ORTHO05D006226 2.4e-06 55.8 107 39.3
Ciclev10025711m.g Citrus clementina HOM05D005052 ORTHO05D006226 2.4e-06 55.8 112 38.4
CDE02G2775 Ceratophyllum demersum HOM05D005052 ORTHO05D006226 3.2e-06 55.5 32 75.0
CDE04G1456 Ceratophyllum demersum HOM05D005052 ORTHO05D006226 3.2e-06 55.5 32 75.0
Solyc02g083590.3 Solanum lycopersicum HOM05D005052 ORTHO05D006226 4.2e-06 55.1 116 36.2
SGA_v2.0_scaffold273G46395 Striga asiatica HOM05D005052 ORTHO05D006226 4.2e-06 55.1 72 44.4
Gohir.D11G180500 Gossypium hirsutum HOM05D005052 ORTHO05D006226 5.5e-06 54.7 33 75.8
Cc07_g11060 Coffea canephora HOM05D005052 ORTHO05D006226 7.1e-06 54.3 111 38.7
Hma1.2p1_2620F.1_g325580 Hydrangea macrophylla HOM05D005052 ORTHO05D006226 7.1e-06 54.3 27 88.9
Pp3c13_24150 Physcomitrium patens HOM05D005052 ORTHO05D006226 7.1e-06 54.3 31 77.4
Thhalv10004219m.g Eutrema salsugineum HOM05D005052 ORTHO05D006226 9.3e-06 53.9 108 37.0
SMO228G0049 Selaginella moellendorffii HOM05D005052 ORTHO05D006226 9.3e-06 53.9 29 79.3


User provided reference genes

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