Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0040008 Camellia sinensis var. sinensis HOM05D006855 ORTHO05D008695 1.0e-83 313.2 139 100.0
CSS0015338 Camellia sinensis var. sinensis HOM05D006855 ORTHO05D008695 2.3e-59 232.3 122 87.7
CSS0002421 Camellia sinensis var. sinensis HOM05D006855 ORTHO05D008695 1.4e-43 179.9 134 68.7
CSS0027349 Camellia sinensis var. sinensis HOM05D006855 ORTHO05D008695 1.8e-43 179.5 117 75.2
Actinidia15119 Actinidia chinensis HOM05D006855 ORTHO05D008695 1.3e-41 173.3 134 62.7
Dinv14753 Davidia involucrata HOM05D006855 ORTHO05D008695 2.0e-39 166.0 134 58.2
vmacro16160 Vaccinium macrocarpon HOM05D006855 ORTHO05D008695 2.0e-34 149.4 156 50.0
TAR629G1507 Trochodendron aralioides HOM05D006855 ORTHO05D008695 1.6e-31 139.8 136 48.5
Cc11_g16140 Coffea canephora HOM05D006855 ORTHO05D008695 1.0e-30 137.1 137 46.7
CiPaw.05G176800 Carya illinoinensis HOM05D006855 ORTHO05D008695 1.9e-29 132.9 134 47.8
PSO210G7557 Papaver somniferum HOM05D006855 ORTHO05D008695 5.6e-29 131.3 134 45.5
Nn3g16630 Nelumbo nucifera HOM05D006855 ORTHO05D008695 7.3e-29 131.0 134 46.3
GSVIVG01000584001 Vitis vinifera HOM05D006855 ORTHO05D008695 1.2e-28 130.2 117 50.4
CAN.G379.20 Capsicum annuum HOM05D006855 ORTHO05D008695 1.6e-28 129.8 134 44.8
PGSC0003DMG400022710 Solanum tuberosum HOM05D006855 ORTHO05D008695 1.6e-28 129.8 134 45.5
Sopen01g004390 Solanum pennellii HOM05D006855 ORTHO05D008695 2.1e-28 129.4 134 44.8
Glyma.11G244400 Glycine max HOM05D006855 ORTHO05D008695 8.1e-28 127.5 134 45.5
Nitab4.5_0015117g0010 Nicotiana tabacum HOM05D006855 ORTHO05D008695 8.1e-28 127.5 134 46.3
PSO478G2928 Papaver somniferum HOM05D006855 ORTHO05D008695 8.1e-28 127.5 134 44.0
Solyc01g008900.4 Solanum lycopersicum HOM05D006855 ORTHO05D008695 8.1e-28 127.5 134 44.8
Peaxi162Scf00050g00819 Petunia axillaris HOM05D006855 ORTHO05D008695 1.1e-27 127.1 134 45.5
Aqoxy3G00656 Aquilegia oxysepala HOM05D006855 ORTHO05D008695 1.4e-27 126.7 137 43.1
Aqoxy3G01366 Aquilegia oxysepala HOM05D006855 ORTHO05D008695 1.4e-27 126.7 137 43.1
Medtr3g086360 Medicago truncatula HOM05D006855 ORTHO05D008695 2.3e-27 125.9 134 45.5
Phvul.001G256400 Phaseolus vulgaris HOM05D006855 ORTHO05D008695 2.3e-27 125.9 134 43.3
Lj6g0028045 Lotus japonicus HOM05D006855 ORTHO05D008695 4.0e-27 125.2 134 46.3
Ciclev10031545m.g Citrus clementina HOM05D006855 ORTHO05D008695 6.8e-27 124.4 134 44.0
TPR.G5676 Trifolium pratense HOM05D006855 ORTHO05D008695 6.8e-27 124.4 134 45.5
MSTRG.548 Avicennia marina HOM05D006855 ORTHO05D008695 8.9e-27 124.0 134 45.5
Ca_25129_v3 Cicer arietinum L. HOM05D006855 ORTHO05D008695 1.2e-26 123.6 134 43.3
Sed0018660 Sechium edule HOM05D006855 ORTHO05D008695 1.5e-26 123.2 138 43.5
Manes.12G019600 Manihot esculenta HOM05D006855 ORTHO05D008695 2.0e-26 122.9 134 44.8
Lalb_Chr11g0075551 Lupinus albus HOM05D006855 ORTHO05D008695 2.6e-26 122.5 134 44.8
VMungo1383G3215 Vigna mungo HOM05D000933 ORTHO05D000820 3.4e-26 122.1 137 42.3
Prupe.1G240700 Prunus persica HOM05D006855 ORTHO05D008695 5.8e-26 121.3 134 46.3
Duzib248G0606 Durio zibethinus HOM05D006855 ORTHO05D008695 7.6e-26 120.9 135 43.0
arahy.Tifrunner.gnm1.ann1.FYV5AX Arachis hypogaea HOM05D006855 ORTHO05D008695 9.9e-26 120.6 137 43.1
ClCG05G026110 Citrullus lanatus HOM05D006855 ORTHO05D008695 1.3e-25 120.2 137 43.1
Lsat_1_v5_gn_8_153661 Lactuca sativa HOM05D006855 ORTHO05D008695 1.3e-25 120.2 134 44.8
MD13G1105700 Malus domestica HOM05D006855 ORTHO05D008695 1.3e-25 120.2 134 44.8
Cpa.g.sc33.79 Carica papaya HOM05D006855 ORTHO05D008695 1.7e-25 119.8 122 46.7
Potri.010G051200 Populus trichocarpa HOM05D006855 ORTHO05D008695 1.7e-25 119.8 134 46.3
Psat5g092640 Pisum sativum HOM05D006855 ORTHO05D008695 2.2e-25 119.4 137 43.8
Atru.chr11.2187 Acer truncatum HOM05D006855 ORTHO05D008695 3.7e-25 118.6 134 44.8
ATR0796G133 Amborella trichopoda HOM05D006855 ORTHO05D008695 3.7e-25 118.6 134 44.0
FAN17G2133 Fragaria x ananassa HOM05D006855 ORTHO05D008695 6.4e-25 117.9 134 45.5
ECA233G5842 Erigeron canadensis HOM05D000068 ORTHO05D000084 8.4e-25 117.5 134 46.3
FAN14G3171 Fragaria x ananassa HOM05D006855 ORTHO05D008695 8.4e-25 117.5 119 48.7
COL.COLO4_23530 Corchorus olitorius HOM05D006855 ORTHO05D008695 1.1e-24 117.1 134 42.5
FAN07G2733 Fragaria x ananassa HOM05D006855 ORTHO05D008695 1.1e-24 117.1 134 45.5
MELO3C011916.2 Cucumis melo HOM05D006855 ORTHO05D008695 3.2e-24 115.5 134 41.8
FAN18G3688 Fragaria x ananassa HOM05D006855 ORTHO05D008695 3.2e-24 115.5 117 48.7
RcHm_v2.0_Chr4g0432431 Rosa chinensis HOM05D006855 ORTHO05D008695 3.2e-24 115.5 134 44.8
FAN12G0810 Fragaria x ananassa HOM05D006855 ORTHO05D008695 4.1e-24 115.2 134 44.8
Thecc.02G266900 Theobroma cacao HOM05D006855 ORTHO05D008695 4.1e-24 115.2 134 42.5
Haze_12292 Corylus avellana HOM05D006855 ORTHO05D008695 9.2e-24 114.0 151 41.1
HanXRQChr12g0371791 Helianthus annuus HOM05D006855 ORTHO05D008695 9.2e-24 114.0 132 47.0
CsaV3_5G030740 Cucumis sativus L. HOM05D006855 ORTHO05D008695 1.2e-23 113.6 137 42.3
TWI75G0344 Tripterygium wilfordii HOM05D006855 ORTHO05D008695 1.2e-23 113.6 134 44.0
CANSAT01G1415 Cannabis sativa HOM05D006855 ORTHO05D008695 1.6e-23 113.2 138 45.7
FAN22G2334 Fragaria x ananassa HOM05D006855 ORTHO05D008695 6.0e-23 111.3 134 44.0
Gohir.D12G150600 Gossypium hirsutum HOM05D006855 ORTHO05D008695 6.0e-23 111.3 117 44.4
PGR083G2447 Punica granatum HOM05D006855 ORTHO05D008695 6.0e-23 111.3 117 47.0
Eucgr.H02451 Eucalyptus grandis HOM05D006855 ORTHO05D008695 1.7e-22 109.8 134 41.8
Gohir.A12G146000 Gossypium hirsutum HOM05D006855 ORTHO05D008695 3.9e-22 108.6 117 44.4
Gorai.008G162100 Gossypium raimondii HOM05D006855 ORTHO05D008695 5.1e-22 108.2 117 42.7
FAN08G3042 Fragaria x ananassa HOM05D006855 ORTHO05D008695 8.6e-22 107.5 110 47.3
Migut.K00633 Erythranthe guttata HOM05D006855 ORTHO05D008695 2.5e-21 105.9 134 38.8
Ah.02g130370 Amaranthus hybridus HOM05D006855 ORTHO05D008695 3.3e-21 105.5 135 39.3
AUR62005523 Chenopodium quinoa HOM05D006855 ORTHO05D008695 4.3e-21 105.1 139 38.1
AUR62024216 Chenopodium quinoa HOM05D006855 ORTHO05D008695 1.2e-20 103.6 134 38.8
THA.LOC104825678 Tarenaya hassleriana HOM05D006855 ORTHO05D008695 1.6e-20 103.2 134 39.6
MBI19_g16323_MAGBIO Magnolia biondii HOM05D006855 ORTHO05D008695 2.1e-20 102.8 103 48.5
SGA_v2.0_scaffold100G29585 Striga asiatica HOM05D006855 ORTHO05D008695 6.2e-20 101.3 136 36.0
QL03p056162 Quercus lobata HOM05D006855 ORTHO05D008695 1.1e-19 100.5 74 55.4
FAN15G2953 Fragaria x ananassa HOM05D006855 ORTHO05D008695 5.2e-19 98.2 107 43.0
CDE02G0600 Ceratophyllum demersum HOM05D006855 ORTHO05D008695 1.2e-18 97.1 117 41.9
Carub.0005s0400 Capsella rubella HOM05D006855 ORTHO05D008695 3.4e-18 95.5 134 35.8
FAN23G2199 Fragaria x ananassa HOM05D006855 ORTHO05D008695 3.4e-18 95.5 107 42.1
arahy.Tifrunner.gnm1.ann1.74BAAJ Arachis hypogaea HOM05D006855 ORTHO05D008695 1.7e-17 93.2 102 44.1
CARHR147120 Cardamine hirsuta HOM05D006855 ORTHO05D008695 1.7e-17 93.2 134 35.1
SEGI_08498 Sequoiadendron giganteum HOM05D006855 ORTHO05D008695 4.9e-17 91.7 121 35.5
EL10As2g23185 Beta vulgaris HOM05D006855 ORTHO05D008695 6.4e-17 91.3 134 37.3
Sp2g15320 Schrenkiella parvula HOM05D006855 ORTHO05D008695 6.4e-17 91.3 134 35.1
HPP92_023148 Vanilla planifolia HOM05D006855 ORTHO05D008695 6.4e-17 91.3 116 36.2
AL5G14830 Arabidopsis lyrata HOM05D006855 ORTHO05D008695 1.4e-16 90.1 119 36.1
SalBow2G0666 Salvia bowleyana HOM05D006855 ORTHO05D008695 1.4e-16 90.1 132 38.6
Aa31LG2G6230 Aethionema arabicum HOM05D006855 ORTHO05D008695 1.9e-16 89.7 135 34.8
C07p35130 Brassica napus HOM05D006855 ORTHO05D008695 1.9e-16 89.7 134 35.8
A06p42230 Brassica napus HOM05D006855 ORTHO05D008695 2.4e-16 89.4 134 35.8
BraA06t27139Z Brassica rapa HOM05D006855 ORTHO05D008695 2.4e-16 89.4 134 35.8
Thhalv10004274m.g Eutrema salsugineum HOM05D006855 ORTHO05D008695 2.4e-16 89.4 134 34.3
BcaC06g33927 Brassica carinata HOM05D006855 ORTHO05D008695 5.4e-16 88.2 134 35.1
BolC7t44041H Brassica oleracea HOM05D006855 ORTHO05D008695 5.4e-16 88.2 134 35.1
Zm00001eb155910 Zea mays HOM05D006855 ORTHO05D008695 1.2e-15 87.0 119 37.0
Lj3A1062T101 Lonicera japonica HOM05D006855 ORTHO05D008695 1.6e-15 86.7 134 37.3
Os01g0695600 Oryza sativa ssp. japonica HOM05D006855 ORTHO05D008695 4.6e-15 85.1 118 37.3
BcaC06g31090 Brassica carinata HOM05D006855 ORTHO05D008695 3.9e-14 82.0 134 35.1
Carub.0005s0511 Capsella rubella HOM05D006855 ORTHO05D008695 1.5e-13 80.1 114 35.1
VMungo1383G3417 Vigna mungo HOM05D006350 ORTHO05D007850 6.2e-12 74.7 66 48.5
AT3G26115 Arabidopsis thaliana HOM05D006855 ORTHO05D008695 1.4e-11 73.6 120 33.3
Mapoly0058s0079 Marchantia polymorpha HOM05D006855 ORTHO05D008695 6.9e-11 71.2 134 32.8
Pp3c22_21870 Physcomitrium patens HOM05D006855 ORTHO05D008695 6.9e-11 71.2 118 32.2
unitig_699.g19941 Utricularia gibba HOM05D002671 ORTHO05D001380 1.5e-10 70.1 117 32.5


User provided reference genes

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