Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0040007 Camellia sinensis var. sinensis HOM05D005563 ORTHO05D006667 6.0e-255 883.6 431 100.0
CSS0002080 Camellia sinensis var. sinensis HOM05D005563 ORTHO05D006667 1.8e-251 872.1 431 98.6
Rhsim01G0058900 Rhododendron simsii HOM05D005563 ORTHO05D006667 6.1e-183 644.4 428 74.3
Rhsim01G0059200 Rhododendron simsii HOM05D005563 ORTHO05D006667 4.4e-181 638.3 428 73.8
Dinv22054 Davidia involucrata HOM05D005563 ORTHO05D006667 2.2e-180 636.0 432 71.3
vmacro07741 Vaccinium macrocarpon HOM05D005563 ORTHO05D006667 3.5e-178 628.6 427 72.6
Actinidia29363 Actinidia chinensis HOM05D005563 ORTHO05D006667 5.0e-177 624.8 409 76.0
Cfa007306 Carpinus fangiana HOM05D005563 ORTHO05D006667 2.6e-157 559.3 413 65.9
GSVIVG01037139001 Vitis vinifera HOM05D005563 ORTHO05D006667 9.8e-157 557.4 407 66.6
Ciclev10020232m.g Citrus clementina HOM05D005563 ORTHO05D006667 1.5e-152 543.5 426 62.0
Prupe.8G002700 Prunus persica HOM05D005563 ORTHO05D006667 1.5e-152 543.5 410 65.6
QL09p001227 Quercus lobata HOM05D005563 ORTHO05D006667 2.1e-151 539.7 413 64.6
TAR628G0232 Trochodendron aralioides HOM05D005563 ORTHO05D006667 2.8e-151 539.3 414 64.3
CiPaw.04G008700 Carya illinoinensis HOM05D005563 ORTHO05D006667 5.8e-149 531.6 409 64.8
RcHm_v2.0_Chr6g0249561 Rosa chinensis HOM05D005563 ORTHO05D006667 1.9e-147 526.6 411 63.7
Haze_14007 Corylus avellana HOM05D005563 ORTHO05D006667 2.7e-146 522.7 517 53.6
Duzib177G0343 Durio zibethinus HOM05D005563 ORTHO05D006667 3.5e-146 522.3 411 62.5
Thecc.05G149300 Theobroma cacao HOM05D005563 ORTHO05D006667 3.0e-145 519.2 413 62.2
CANSAT64G1925 Cannabis sativa HOM05D005563 ORTHO05D006667 1.2e-141 507.3 408 62.5
Potri.013G094800 Populus trichocarpa HOM05D005563 ORTHO05D006667 4.4e-141 505.4 411 61.3
MD10G1001500 Malus domestica HOM05D005563 ORTHO05D006667 1.7e-140 503.4 411 63.3
Atru.chr13.2584 Acer truncatum HOM05D005563 ORTHO05D006667 3.7e-140 502.3 427 58.8
FvH4_2g00270 Fragaria vesca HOM05D005563 ORTHO05D006667 3.2e-139 499.2 416 60.8
DCAR_010113 Daucus carota HOM05D005563 ORTHO05D006667 9.2e-139 497.7 428 59.3
Cc02_g22680 Coffea canephora HOM05D005563 ORTHO05D006667 1.6e-138 496.9 409 60.9
DCAR_001180 Daucus carota HOM05D005563 ORTHO05D006667 2.7e-138 496.1 429 58.5
Nn5g27214 Nelumbo nucifera HOM05D005563 ORTHO05D006667 3.0e-137 492.7 414 60.9
Oeu009445.1 Olea europaea HOM05D005563 ORTHO05D006667 5.6e-136 488.4 415 60.0
Sabra13G0080900 Salix brachista HOM05D005563 ORTHO05D006667 5.6e-136 488.4 411 60.6
ECA232G0495 Erigeron canadensis HOM05D004116 ORTHO05D004734 2.1e-135 486.5 399 62.4
FAN24G3564 Fragaria x ananassa HOM05D005563 ORTHO05D006667 2.8e-135 486.1 435 57.9
Glyma.13G312100 Glycine max HOM05D005563 ORTHO05D006667 6.2e-135 485.0 409 61.4
Oeu019017.1 Olea europaea HOM05D005563 ORTHO05D006667 4.0e-134 482.3 415 60.2
DCAR_027509 Daucus carota HOM05D005563 ORTHO05D006667 8.9e-134 481.1 426 57.5
Gorai.009G262600 Gossypium raimondii HOM05D005563 ORTHO05D006667 1.5e-133 480.3 407 58.7
Lalb_Chr24g0393341 Lupinus albus HOM05D005563 ORTHO05D006667 5.8e-133 478.4 425 57.4
Lj3g0011209 Lotus japonicus HOM05D005563 ORTHO05D006667 7.5e-133 478.0 408 60.8
Aqoxy1G00244 Aquilegia oxysepala HOM05D005563 ORTHO05D006667 3.7e-132 475.7 410 58.0
ClCG11G000440 Citrullus lanatus HOM05D005563 ORTHO05D006667 8.3e-132 474.6 410 58.8
arahy.Tifrunner.gnm1.ann1.QV839S Arachis hypogaea HOM05D005563 ORTHO05D006667 1.4e-131 473.8 410 58.8
Phvul.005G118600 Phaseolus vulgaris HOM05D005563 ORTHO05D006667 9.2e-131 471.1 409 59.9
Migut.G00338 Erythranthe guttata HOM05D005563 ORTHO05D006667 6.0e-130 468.4 414 56.3
VMungo1080G1448 Vigna mungo HOM05D005563 ORTHO05D006667 1.3e-129 467.2 404 60.1
CAN.G587.23 Capsicum annuum HOM05D005563 ORTHO05D006667 6.6e-129 464.9 407 58.5
PGR044G0823 Punica granatum HOM05D005563 ORTHO05D006667 3.3e-128 462.6 412 59.0
Nitab4.5_0006591g0020 Nicotiana tabacum HOM05D005563 ORTHO05D006667 7.3e-128 461.5 410 58.3
TPR.G23443 Trifolium pratense HOM05D005563 ORTHO05D006667 9.5e-128 461.1 425 58.6
TAR633G2728 Trochodendron aralioides HOM05D005563 ORTHO05D006667 9.5e-128 461.1 417 56.4
CsaV3_6G042510 Cucumis sativus L. HOM05D005563 ORTHO05D006667 1.8e-126 456.8 410 57.1
CAN.G769.9 Capsicum annuum HOM05D005563 ORTHO05D006667 4.0e-126 455.7 407 58.5
Medtr8g103020 Medicago truncatula HOM05D005563 ORTHO05D006667 1.3e-124 450.7 425 57.6
Psat7g014680 Pisum sativum HOM05D005563 ORTHO05D006667 4.9e-124 448.7 436 55.3
Solyc03g026100.1 Solanum lycopersicum HOM05D005563 ORTHO05D006667 1.1e-123 447.6 408 57.6
Sopen03g004940 Solanum pennellii HOM05D005563 ORTHO05D006667 1.7e-121 440.3 408 56.9
SGA_v2.0_scaffold277G46672 Striga asiatica HOM05D005563 ORTHO05D006667 3.0e-121 439.5 417 55.4
PGSC0003DMG400014277 Solanum tuberosum HOM05D005563 ORTHO05D006667 3.9e-121 439.1 407 57.7
Hund26934 Selenicereus undatus HOM05D005563 ORTHO05D006667 2.5e-120 436.4 406 56.7
Lsat_1_v5_gn_4_170241 Lactuca sativa HOM05D005563 ORTHO05D006667 9.6e-120 434.5 411 56.7
PSO761G0451 Papaver somniferum HOM05D005563 ORTHO05D006667 1.6e-119 433.7 421 55.6
Manes.18G108800 Manihot esculenta HOM05D005563 ORTHO05D006667 8.1e-119 431.4 363 61.2
TWI18G0160 Tripterygium wilfordii HOM05D005563 ORTHO05D006667 8.1e-119 431.4 427 53.9
Eucgr.G00337 Eucalyptus grandis HOM05D005563 ORTHO05D006667 5.3e-118 428.7 411 56.7
CARHR064610 Cardamine hirsuta HOM05D005563 ORTHO05D006667 2.6e-117 426.4 411 54.3
Aa31LG4G9220 Aethionema arabicum HOM05D005563 ORTHO05D006667 1.3e-116 424.1 407 54.8
Sp5g26490 Schrenkiella parvula HOM05D005563 ORTHO05D006667 1.3e-116 424.1 409 54.5
A07p30780 Brassica napus HOM05D005563 ORTHO05D006667 4.2e-115 419.1 408 54.9
AL2G30920 Arabidopsis lyrata HOM05D005563 ORTHO05D006667 1.2e-114 417.5 412 54.1
C06p35680 Brassica napus HOM05D005563 ORTHO05D006667 1.2e-114 417.5 407 54.1
BcaB03g14889 Brassica carinata HOM05D005563 ORTHO05D006667 1.6e-114 417.2 411 54.0
BcaC08g45784 Brassica carinata HOM05D005563 ORTHO05D006667 1.6e-114 417.2 407 54.1
MBI14_g08074_MAGBIO Magnolia biondii HOM05D005563 ORTHO05D006667 6.0e-114 415.2 393 57.5
THA.LOC104825030 Tarenaya hassleriana HOM05D005563 ORTHO05D006667 6.0e-114 415.2 415 52.5
BolC6t38691H Brassica oleracea HOM05D005563 ORTHO05D006667 2.3e-113 413.3 411 53.5
BraA07t30715Z Brassica rapa HOM05D005563 ORTHO05D006667 6.6e-113 411.8 412 54.1
Thhalv10018623m.g Eutrema salsugineum HOM05D005563 ORTHO05D006667 8.7e-113 411.4 407 53.6
AT5G24670 Arabidopsis thaliana HOM05D005563 ORTHO05D006667 3.3e-112 409.5 413 53.0
AL1G12770 Arabidopsis lyrata HOM05D005563 ORTHO05D006667 7.3e-112 408.3 413 54.0
BcaB03g15600 Brassica carinata HOM05D005563 ORTHO05D006667 1.6e-111 407.1 407 53.3
Carub.0002s1819 Capsella rubella HOM05D005563 ORTHO05D006667 8.1e-111 404.8 413 52.5
PSO170G2533 Papaver somniferum HOM05D005563 ORTHO05D006667 1.4e-110 404.1 413 52.8
arahy.Tifrunner.gnm1.ann1.NB4SND Arachis hypogaea HOM05D005563 ORTHO05D006667 2.4e-110 403.3 431 52.2
PSO407G0243 Papaver somniferum HOM05D005563 ORTHO05D006667 9.9e-109 397.9 422 51.9
Nitab4.5_0001489g0080 Nicotiana tabacum HOM05D005563 ORTHO05D006667 1.1e-107 394.4 366 56.8
PSO017G5640 Papaver somniferum HOM05D005563 ORTHO05D006667 3.2e-107 392.9 418 51.2
Carub.0004s0662 Capsella rubella HOM05D005563 ORTHO05D006667 4.2e-107 392.5 404 52.5
Peaxi162Scf00078g01133 Petunia axillaris HOM05D005563 ORTHO05D006667 5.4e-107 392.1 351 58.1
AUR62023340 Chenopodium quinoa HOM05D005563 ORTHO05D006667 3.5e-106 389.4 406 53.4
HanXRQChr15g0488461 Helianthus annuus HOM05D005563 ORTHO05D006667 3.0e-105 386.3 358 57.0
Sed0012109 Sechium edule HOM05D005563 ORTHO05D006667 6.2e-103 378.6 332 58.7
Nitab4.5_0000079g0140 Nicotiana tabacum HOM05D005563 ORTHO05D006667 1.5e-101 374.0 404 51.7
MELO3C022956.2 Cucumis melo HOM05D005563 ORTHO05D006667 3.8e-100 369.4 357 53.8
unitig_32.g10817 Utricularia gibba HOM05D005563 ORTHO05D006667 1.4e-99 367.5 380 53.4
AUR62013814 Chenopodium quinoa HOM05D005563 ORTHO05D006667 2.7e-98 363.2 507 44.2
Gohir.A05G248000 Gossypium hirsutum HOM05D005563 ORTHO05D006667 9.6e-96 354.8 320 56.6
Gohir.D05G248801 Gossypium hirsutum HOM05D005563 ORTHO05D006667 1.4e-94 350.9 320 56.2
FAN19G1429 Fragaria x ananassa HOM05D005563 ORTHO05D006667 4.5e-93 345.9 444 48.0
ATR0580G344 Amborella trichopoda HOM05D005563 ORTHO05D006667 5.0e-92 342.4 424 45.3
TPR.G11352 Trifolium pratense HOM05D005563 ORTHO05D006667 6.9e-86 322.0 313 56.5
BcaB03g14888 Brassica carinata HOM05D005563 ORTHO05D006667 5.7e-80 302.4 355 47.3
AUR62037990 Chenopodium quinoa HOM05D005563 ORTHO05D006667 7.4e-80 302.0 350 48.3
Eucgr.C03620 Eucalyptus grandis HOM05D005563 ORTHO05D006667 2.2e-79 300.4 292 57.2
EL10Ac1g00691 Beta vulgaris HOM05D005563 ORTHO05D006667 1.1e-78 298.1 365 47.9
COL.COLO4_34067 Corchorus olitorius HOM05D005563 ORTHO05D006667 1.4e-73 281.2 311 50.8
Sc19g0006900 Simmondsia chinensis HOM05D005563 ORTHO05D006667 8.8e-73 278.5 315 50.8
Ca_17321_v3 Cicer arietinum L. HOM05D005563 ORTHO05D006667 1.1e-64 251.5 316 50.3
Cpa.g.sc249.8 Carica papaya HOM05D005563 ORTHO05D006667 1.7e-60 237.7 166 68.1
BolC6t39597H Brassica oleracea HOM05D005563 ORTHO05D006667 3.4e-56 223.4 336 41.1
CDE04G2046 Ceratophyllum demersum HOM05D005563 ORTHO05D006667 5.7e-56 222.6 266 48.9
Mapoly0019s0003 Marchantia polymorpha HOM05D005563 ORTHO05D006667 1.3e-55 221.5 443 35.2
Pp3c5_5220 Physcomitrium patens HOM05D005563 ORTHO05D006667 4.8e-55 219.5 399 37.3
HPP92_009712 Vanilla planifolia HOM05D005563 ORTHO05D006667 1.4e-54 218.0 267 49.1
SHI17431 Sapria himalayana HOM05D005563 ORTHO05D006667 4.1e-54 216.5 276 43.8
SMO356G0078 Selaginella moellendorffii HOM05D005563 ORTHO05D006667 4.2e-51 206.5 405 33.8
Actinidia03534 Actinidia chinensis HOM05D005563 ORTHO05D006667 3.6e-50 203.4 238 50.8
AagrBONN_evm.TU.Sc2ySwM_344.1216 Anthoceros agrestis HOM05D005563 ORTHO05D006667 6.1e-50 202.6 465 32.0
Zm00001eb088860 Zea mays HOM05D005563 ORTHO05D006667 1.5e-43 181.4 267 41.9
Eucgr.C03478 Eucalyptus grandis HOM05D005563 ORTHO05D006667 2.0e-40 171.0 249 42.6
MBI14_g20078_MAGBIO Magnolia biondii HOM05D005563 ORTHO05D006667 8.6e-36 155.6 86 79.1
MBI13_g08747_MAGBIO Magnolia biondii HOM05D005563 ORTHO05D006667 9.5e-35 152.1 86 75.6
MBI08_g10505_MAGBIO Magnolia biondii HOM05D000152 ORTHO05D006667 1.6e-34 151.4 83 79.5
MBI15_g36474_MAGBIO Magnolia biondii HOM05D005563 ORTHO05D006667 1.4e-33 148.3 86 74.4
DCAR_001179 Daucus carota HOM05D005563 ORTHO05D006667 4.0e-33 146.7 172 48.3
TPR.G11340 Trifolium pratense HOM05D005563 ORTHO05D006667 8.9e-33 145.6 74 86.5
Eucgr.C03640 Eucalyptus grandis HOM05D005563 ORTHO05D006667 6.4e-31 139.4 113 56.6
MCO11G544 Micromonas commoda HOM05D005563 ORTHO05D006667 1.6e-29 134.8 379 28.8
Eucgr.L00998 Eucalyptus grandis HOM05D005563 ORTHO05D006667 4.6e-29 133.3 204 43.1
Thecc.10G189600 Theobroma cacao HOM05D005563 ORTHO05D006667 5.6e-27 126.3 103 60.2
CBR_g50242 Chara braunii HOM05D005563 ORTHO05D006667 8.1e-26 122.5 582 24.9
C06p46160 Brassica napus HOM05D005563 ORTHO05D006667 3.1e-25 120.6 198 41.4
CBR_g8323 Chara braunii HOM05D005563 ORTHO05D006667 5.4e-22 109.8 613 23.3
Thecc.10G189700 Theobroma cacao HOM05D005563 ORTHO05D006667 5.1e-20 103.2 114 49.1
FAN20G2324 Fragaria x ananassa HOM05D005563 ORTHO05D006667 1.1e-19 102.1 57 75.4
Eucgr.C03636 Eucalyptus grandis HOM05D005563 ORTHO05D006667 2.8e-18 97.4 168 37.5
Cre10.g439200 Chlamydomonas reinhardtii HOM05D005563 ORTHO05D006667 3.6e-18 97.1 172 34.9
Haze_14787 Corylus avellana HOM05D005563 ORTHO05D006667 7.6e-16 89.4 88 50.0
Actinidia28221 Actinidia chinensis HOM05D005563 ORTHO05D006667 3.2e-14 84.0 85 57.6
PRCOL_00003298 Prasinoderma coloniale HOM05D005563 ORTHO05D006667 8.6e-12 75.9 72 48.6
SHI17433 Sapria himalayana HOM05D005563 ORTHO05D006667 4.3e-11 73.6 62 53.2


User provided reference genes

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