Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0007014 Camellia sinensis var. sinensis HOM05D007050 ORTHO05D008849 1.4e-81 306.2 156 100.0
CSS0039992 Camellia sinensis var. sinensis HOM05D007050 ORTHO05D008849 1.4e-81 306.2 156 100.0
CSS0050457 Camellia sinensis var. sinensis HOM05D007050 ORTHO05D008849 6.6e-79 297.4 156 97.4
Rhsim09G0195800 Rhododendron simsii HOM05D007050 ORTHO05D008849 2.6e-67 258.8 156 87.2
vmacro09864 Vaccinium macrocarpon HOM05D007050 ORTHO05D008849 2.4e-65 252.3 155 84.5
Dinv01994 Davidia involucrata HOM05D007050 ORTHO05D008849 2.1e-64 249.2 156 82.7
Dinv21998 Davidia involucrata HOM05D007050 ORTHO05D008849 2.7e-64 248.8 156 82.7
Dinv30101 Davidia involucrata HOM05D007050 ORTHO05D008849 2.7e-64 248.8 156 82.7
GSVIVG01010640001 Vitis vinifera HOM05D007050 ORTHO05D008849 6.6e-63 244.2 156 78.8
CiPaw.04G068600 Carya illinoinensis HOM05D007050 ORTHO05D008849 9.6e-62 240.4 156 80.1
RcHm_v2.0_Chr6g0256951 Rosa chinensis HOM05D007050 ORTHO05D008849 3.6e-61 238.4 156 78.8
Prupe.8G123300 Prunus persica HOM05D007050 ORTHO05D008849 6.2e-61 237.7 156 78.2
DCAR_020794 Daucus carota HOM05D007050 ORTHO05D008849 6.9e-60 234.2 156 76.3
MD05G1079400 Malus domestica HOM05D007050 ORTHO05D008849 9.0e-60 233.8 156 78.8
Haze_13774 Corylus avellana HOM05D007050 ORTHO05D008849 2.6e-59 232.3 156 76.9
TAR375G0109 Trochodendron aralioides HOM05D007050 ORTHO05D008849 3.4e-59 231.9 156 76.9
CANSAT25G0493 Cannabis sativa HOM05D007050 ORTHO05D008849 4.5e-59 231.5 156 75.6
Duzib084G1442 Durio zibethinus HOM05D007050 ORTHO05D008849 5.8e-59 231.1 152 78.3
Lj2P125T52 Lonicera japonica HOM05D007050 ORTHO05D008849 1.3e-58 229.9 157 75.2
ClCG01G005370 Citrullus lanatus HOM05D007050 ORTHO05D008849 4.9e-58 228.0 156 76.9
FvH4_2g06230 Fragaria vesca HOM05D007050 ORTHO05D008849 4.9e-58 228.0 156 76.9
FAN15G0493 Fragaria x ananassa HOM05D007050 ORTHO05D008849 4.9e-58 228.0 154 77.3
Nitab4.5_0005171g0060 Nicotiana tabacum HOM05D007050 ORTHO05D008849 8.4e-58 227.3 157 76.4
Nitab4.5_0007465g0080 Nicotiana tabacum HOM05D007050 ORTHO05D008849 8.4e-58 227.3 157 75.8
PGR031G0901 Punica granatum HOM05D007050 ORTHO05D008849 8.4e-58 227.3 160 74.4
Potri.012G134700 Populus trichocarpa HOM05D007050 ORTHO05D008849 1.1e-57 226.9 156 75.6
Sc19g0001730 Simmondsia chinensis HOM05D007050 ORTHO05D008849 5.4e-57 224.6 156 75.0
PGSC0003DMG400028475 Solanum tuberosum HOM05D007050 ORTHO05D008849 5.4e-57 224.6 157 75.2
Lj1P158T25 Lonicera japonica HOM05D007050 ORTHO05D008849 7.1e-57 224.2 156 75.6
COL.COLO4_14249 Corchorus olitorius HOM05D007050 ORTHO05D008849 9.3e-57 223.8 152 75.7
Migut.F01153 Erythranthe guttata HOM05D007050 ORTHO05D008849 1.2e-56 223.4 156 71.8
Phvul.006G062300 Phaseolus vulgaris HOM05D007050 ORTHO05D008849 1.2e-56 223.4 156 78.2
Lalb_Chr18g0050481 Lupinus albus HOM05D007050 ORTHO05D008849 2.1e-56 222.6 156 76.3
Sopen02g021430 Solanum pennellii HOM05D007050 ORTHO05D008849 2.7e-56 222.2 157 75.2
SGA_v2.0_scaffold10G05396 Striga asiatica HOM05D007050 ORTHO05D008849 2.7e-56 222.2 156 70.5
Thecc.03G169300 Theobroma cacao HOM05D007050 ORTHO05D008849 3.5e-56 221.9 150 77.3
Sabra12G0101300 Salix brachista HOM05D007050 ORTHO05D008849 6.0e-56 221.1 156 73.7
Sed0026780 Sechium edule HOM05D007050 ORTHO05D008849 6.0e-56 221.1 156 73.7
TWI14G0742 Tripterygium wilfordii HOM05D007050 ORTHO05D008849 6.0e-56 221.1 156 75.0
Ciclev10006100m.g Citrus clementina HOM05D007050 ORTHO05D008849 1.0e-55 220.3 157 75.2
CsaV3_5G005620 Cucumis sativus L. HOM05D007050 ORTHO05D008849 1.0e-55 220.3 157 75.2
Ca_14876_v3 Cicer arietinum L. HOM05D007050 ORTHO05D008849 1.3e-55 219.9 156 75.6
Hund18113 Selenicereus undatus HOM05D007050 ORTHO05D008849 1.3e-55 219.9 156 73.7
Glyma.18G070900 Glycine max HOM05D007050 ORTHO05D008849 1.8e-55 219.5 156 77.6
Aqoxy7G00473 Aquilegia oxysepala HOM05D007050 ORTHO05D008849 3.0e-55 218.8 156 70.5
Gohir.A12G261300 Gossypium hirsutum HOM05D007050 ORTHO05D008849 3.9e-55 218.4 143 79.0
Gorai.008G281000 Gossypium raimondii HOM05D007050 ORTHO05D008849 6.7e-55 217.6 143 79.0
Lj6g0001476 Lotus japonicus HOM05D007050 ORTHO05D008849 1.1e-54 216.9 156 76.3
PSO832G4279 Papaver somniferum HOM05D007050 ORTHO05D008849 1.1e-54 216.9 156 71.8
Cc02_g03480 Coffea canephora HOM05D007050 ORTHO05D008849 1.9e-54 216.1 156 75.6
Peaxi162Scf00302g00002 Petunia axillaris HOM05D007050 ORTHO05D008849 2.5e-54 215.7 144 77.8
VMungo0540G0839 Vigna mungo HOM05D007050 ORTHO05D008849 2.5e-54 215.7 156 75.0
Sed0027301 Sechium edule HOM05D007050 ORTHO05D008849 3.3e-54 215.3 156 71.8
CAN.G411.83 Capsicum annuum HOM05D007050 ORTHO05D008849 5.6e-54 214.5 158 72.2
AUR62016042 Chenopodium quinoa HOM05D007050 ORTHO05D008849 5.6e-54 214.5 156 73.1
TPR.G14735 Trifolium pratense HOM05D007050 ORTHO05D008849 7.4e-54 214.2 156 74.4
Psat5g164520 Pisum sativum HOM05D007050 ORTHO05D008849 3.7e-53 211.8 156 74.4
MBI04_g03341_MAGBIO Magnolia biondii HOM05D007050 ORTHO05D008849 6.2e-53 211.1 156 70.5
Nitab4.5_0002395g0040 Nicotiana tabacum HOM05D007050 ORTHO05D008849 1.4e-52 209.9 162 72.2
arahy.Tifrunner.gnm1.ann1.78X7SL Arachis hypogaea HOM05D007050 ORTHO05D008849 2.4e-52 209.1 156 74.4
ATR0712G080 Amborella trichopoda HOM05D007050 ORTHO05D008849 3.1e-52 208.8 127 82.7
arahy.Tifrunner.gnm1.ann1.PW8R36 Arachis hypogaea HOM05D007050 ORTHO05D008849 3.1e-52 208.8 128 85.2
Medtr3g061530 Medicago truncatula HOM05D007050 ORTHO05D008849 4.0e-52 208.4 156 73.1
Os04g0488600 Oryza sativa ssp. japonica HOM05D007050 ORTHO05D008849 4.0e-52 208.4 156 71.8
THA.LOC104820496 Tarenaya hassleriana HOM05D007050 ORTHO05D008849 6.9e-52 207.6 161 69.6
ECA248G3280 Erigeron canadensis HOM05D007050 ORTHO05D008849 9.0e-52 207.2 158 74.1
Hma1.2p1_0270F.1_g108570 Hydrangea macrophylla HOM05D007050 ORTHO05D008849 9.0e-52 207.2 121 87.6
Zm00001eb078970 Zea mays HOM05D007050 ORTHO05D008849 1.2e-51 206.8 148 74.3
Nitab4.5_0002684g0010 Nicotiana tabacum HOM05D007050 ORTHO05D008849 5.8e-51 204.5 140 76.4
unitig_0.g465 Utricularia gibba HOM05D007050 ORTHO05D008849 7.6e-51 204.1 156 68.6
Thhalv10003284m.g Eutrema salsugineum HOM05D007050 ORTHO05D008849 1.3e-50 203.4 156 71.2
Lsat_1_v5_gn_1_51040 Lactuca sativa HOM05D007050 ORTHO05D008849 2.2e-50 202.6 150 72.7
Nitab4.5_0007465g0070 Nicotiana tabacum HOM05D007050 ORTHO05D008849 2.2e-50 202.6 163 69.9
SEGI_25801 Sequoiadendron giganteum HOM05D007050 ORTHO05D008849 8.4e-50 200.7 123 80.5
Aa31LG9G13150 Aethionema arabicum HOM05D007050 ORTHO05D008849 3.2e-49 198.7 118 83.9
Sp2g07800 Schrenkiella parvula HOM05D007050 ORTHO05D008849 3.2e-49 198.7 162 67.3
CARHR186790 Cardamine hirsuta HOM05D007050 ORTHO05D008849 4.2e-49 198.4 158 72.2
HanXRQChr11g0350791 Helianthus annuus HOM05D007050 ORTHO05D008849 5.5e-49 198.0 124 83.9
CDE03G0478 Ceratophyllum demersum HOM05D007050 ORTHO05D008849 1.2e-48 196.8 115 85.2
Carub.0008s0571 Capsella rubella HOM05D007050 ORTHO05D008849 3.5e-48 195.3 164 67.1
Atru.BG.173.p Acer truncatum HOM05D007050 ORTHO05D008849 4.6e-48 194.9 115 87.8
AT5G43050 Arabidopsis thaliana HOM05D007050 ORTHO05D008849 4.6e-48 194.9 165 66.7
C09p25560 Brassica napus HOM05D007050 ORTHO05D008849 1.0e-47 193.7 157 68.2
BolC9t55456H Brassica oleracea HOM05D007050 ORTHO05D008849 1.0e-47 193.7 157 68.2
BraA09t37628Z Brassica rapa HOM05D007050 ORTHO05D008849 1.0e-47 193.7 157 68.8
Actinidia32907 Actinidia chinensis HOM05D007050 ORTHO05D008849 3.0e-47 192.2 127 79.5
BcaB07g31026 Brassica carinata HOM05D007050 ORTHO05D008849 3.0e-47 192.2 160 66.9
A09p20160 Brassica napus HOM05D007050 ORTHO05D008849 3.0e-47 192.2 157 68.2
BcaC04g21951 Brassica carinata HOM05D007050 ORTHO05D008849 3.9e-47 191.8 157 68.2
AL8G17700 Arabidopsis lyrata HOM05D007050 ORTHO05D008849 5.1e-47 191.4 118 83.1
Cfa008270 Carpinus fangiana HOM05D007050 ORTHO05D008849 4.5e-43 178.3 127 73.2
CiPaw.03G101700 Carya illinoinensis HOM05D007050 ORTHO05D008849 5.8e-43 177.9 130 72.3
Eucgr.A02837 Eucalyptus grandis HOM05D007050 ORTHO05D008849 5.8e-43 177.9 156 60.9
Mapoly0142s0029 Marchantia polymorpha HOM05D007050 ORTHO05D008849 5.5e-41 171.4 116 75.0
Atru.chr1.541 Acer truncatum HOM05D007050 ORTHO05D008849 1.3e-39 166.8 143 64.3
Manes.06G142700 Manihot esculenta HOM05D007050 ORTHO05D008849 1.3e-39 166.8 127 67.7
EL10Ac3g05676 Beta vulgaris HOM05D007050 ORTHO05D008849 8.7e-39 164.1 129 67.4
MELO3C005391.2 Cucumis melo HOM05D007050 ORTHO05D008849 1.9e-38 162.9 128 69.5
AagrBONN_evm.TU.Sc2ySwM_344.2682 Anthoceros agrestis HOM05D007050 ORTHO05D008849 4.3e-38 161.8 126 70.6
EL10Ac3g05723 Beta vulgaris HOM05D007050 ORTHO05D008849 5.7e-38 161.4 128 66.4
Pp3c18_12660 Physcomitrium patens HOM05D007050 ORTHO05D008849 7.4e-38 161.0 140 62.9
Gohir.D12G262200 Gossypium hirsutum HOM05D007050 ORTHO05D008849 3.7e-37 158.7 115 72.2
Nn6g34283 Nelumbo nucifera HOM05D007050 ORTHO05D008849 6.3e-37 157.9 127 65.4
SMO352G0024 Selaginella moellendorffii HOM05D007050 ORTHO05D008849 6.9e-36 154.5 104 72.1
AUR62021248 Chenopodium quinoa HOM05D007050 ORTHO05D008849 9.0e-36 154.1 128 64.8
Ah.13g067900 Amaranthus hybridus HOM05D007050 ORTHO05D008849 2.0e-35 152.9 137 59.9
Hma1.2p1_0270F.1_g108560 Hydrangea macrophylla HOM05D007050 ORTHO05D008849 4.5e-35 151.8 141 58.9
CDE04G2008 Ceratophyllum demersum HOM05D007050 ORTHO05D008849 8.8e-31 137.5 91 75.8
CsaV3_5G027180 Cucumis sativus L. HOM05D007050 ORTHO05D008849 6.1e-16 88.2 64 75.0
AagrBONN_evm.TU.Sc2ySwM_362.597 Anthoceros agrestis HOM05D007050 ORTHO05D008849 3.1e-12 75.9 68 57.4
MCO11G758 Micromonas commoda HOM05D007050 ORTHO05D008849 5.9e-11 71.6 108 38.9
SMO353G0424 Selaginella moellendorffii HOM05D002921 ORTHO05D003258 4.4e-06 55.5 77 41.6


User provided reference genes

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