Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0039970 Camellia sinensis var. sinensis HOM05D018314 ORTHO05D014695 1.1e-156 556.6 274 100.0
CSS0022799 Camellia sinensis var. sinensis HOM05D018314 ORTHO05D014695 1.2e-91 340.5 205 84.4
CSS0007717 Camellia sinensis var. sinensis HOM05D018314 ORTHO05D014695 1.0e-90 337.4 276 67.8
CSS0044296 Camellia sinensis var. sinensis HOM05D028273 ORTHO05D014695 1.3e-53 214.2 111 92.8
Hma1.2p1_1373F.1_g278750 Hydrangea macrophylla HOM05D000101 ORTHO05D014695 1.5e-17 94.4 137 41.6
Hma1.2p1_2663F.1_g326426 Hydrangea macrophylla HOM05D000101 ORTHO05D014695 1.5e-17 94.4 137 41.6
CSS0035156 Camellia sinensis var. sinensis HOM05D000101 ORTHO05D000089 6.3e-16 89.0 140 47.1
CSS0041386 Camellia sinensis var. sinensis HOM05D000101 ORTHO05D000089 8.2e-16 88.6 141 46.8
Hma1.2p1_0435F.1_g152390 Hydrangea macrophylla HOM05D000101 ORTHO05D000089 1.1e-15 88.2 134 41.8
Hma1.2p1_0435F.1_g152400 Hydrangea macrophylla HOM05D000101 ORTHO05D000089 2.0e-14 84.0 137 38.7
CSS0033172 Camellia sinensis var. sinensis HOM05D018314 ORTHO05D014695 2.6e-14 83.6 50 80.0
Ciclev10010335m.g Citrus clementina HOM05D000101 ORTHO05D000089 2.5e-12 77.0 109 39.4
vmacro04727 Vaccinium macrocarpon HOM05D000101 ORTHO05D000089 5.5e-12 75.9 125 37.6
vmacro16169 Vaccinium macrocarpon HOM05D000101 ORTHO05D000089 7.2e-12 75.5 114 39.5
Atru.chr2.1124 Acer truncatum HOM05D000101 ORTHO05D014695 1.2e-11 74.7 135 40.0
Oeu042917.1 Olea europaea HOM05D000101 ORTHO05D000089 1.2e-11 74.7 140 35.7
Rhsim11G0147100 Rhododendron simsii HOM05D000101 ORTHO05D000089 2.1e-11 73.9 136 34.6
Ciclev10007349m.g Citrus clementina HOM05D000101 ORTHO05D000089 4.7e-11 72.8 101 39.6
Hma1.2p1_1051F.1_g252060 Hydrangea macrophylla HOM05D000101 ORTHO05D000089 4.7e-11 72.8 137 37.2
Duzib213G0162 Durio zibethinus HOM05D000101 ORTHO05D000089 7.9e-11 72.0 134 32.8
Rhsim11G0146400 Rhododendron simsii HOM05D004882 ORTHO05D000089 7.9e-11 72.0 124 37.1
Dinv29323 Davidia involucrata HOM05D000101 ORTHO05D000089 1.0e-10 71.6 103 40.8
Thecc.07G077700 Theobroma cacao HOM05D000101 ORTHO05D000089 1.4e-10 71.2 131 32.1
Hma1.2p1_2793F.1_g328630 Hydrangea macrophylla HOM05D000101 ORTHO05D000089 2.3e-10 70.5 137 36.5
Rhsim11G0146700 Rhododendron simsii HOM05D000101 ORTHO05D000089 5.1e-10 69.3 135 34.8
Duzib213G0389 Durio zibethinus HOM05D000101 ORTHO05D000089 1.5e-09 67.8 134 33.6
QL12p023483 Quercus lobata HOM05D000101 ORTHO05D000089 2.6e-09 67.0 136 34.6
Dinv29321 Davidia involucrata HOM05D000101 ORTHO05D007021 4.4e-09 66.2 103 38.8
MBI18_g07589_MAGBIO Magnolia biondii HOM05D000101 ORTHO05D006096 4.4e-09 66.2 109 37.6
MBI02_g35906_MAGBIO Magnolia biondii HOM05D000101 ORTHO05D000089 9.7e-09 65.1 123 33.3
Duzib213G1018 Durio zibethinus HOM05D000101 ORTHO05D000089 1.3e-08 64.7 134 33.6
QL05p077009 Quercus lobata HOM05D000101 ORTHO05D000089 1.3e-08 64.7 135 33.3
Ciclev10027440m.g Citrus clementina HOM05D000101 ORTHO05D000089 1.7e-08 64.3 109 35.8
Duzib268G0039 Durio zibethinus HOM05D000101 ORTHO05D000089 1.7e-08 64.3 134 32.1
QL09p032708 Quercus lobata HOM05D000101 ORTHO05D000089 1.7e-08 64.3 110 37.3
Atru.chr2.2804 Acer truncatum HOM05D000101 ORTHO05D000089 2.2e-08 63.9 134 30.6
Duzib238G0002 Durio zibethinus HOM05D000101 ORTHO05D000089 2.2e-08 63.9 136 30.9
Dinv29328 Davidia involucrata HOM05D000101 ORTHO05D000089 2.8e-08 63.5 103 37.9
Atru.chr2.2797 Acer truncatum HOM05D000101 ORTHO05D000089 3.7e-08 63.2 131 30.5
EL10Ac4g08089 Beta vulgaris HOM05D000101 ORTHO05D000089 3.7e-08 63.2 99 33.3
MBI11_g13896_MAGBIO Magnolia biondii HOM05D000101 ORTHO05D000089 3.7e-08 63.2 137 32.1
MBI11_g42046_MAGBIO Magnolia biondii HOM05D000101 ORTHO05D000089 3.7e-08 63.2 137 32.1
QL08p019038 Quercus lobata HOM05D000101 ORTHO05D000089 3.7e-08 63.2 105 35.2
Thecc.03G040300 Theobroma cacao HOM05D000101 ORTHO05D000089 3.7e-08 63.2 103 38.8
Actinidia18750 Actinidia chinensis HOM05D000101 ORTHO05D000089 6.3e-08 62.4 134 30.6
CSS0008325 Camellia sinensis var. sinensis HOM05D000101 ORTHO05D000089 6.3e-08 62.4 138 34.1
Duzib268G1134 Durio zibethinus HOM05D000101 ORTHO05D000089 8.2e-08 62.0 134 31.3
MBI11_g25048_MAGBIO Magnolia biondii HOM05D018314 ORTHO05D014695 1.1e-07 61.6 93 36.6
Ah.06g183650 Amaranthus hybridus HOM05D000101 ORTHO05D000089 1.4e-07 61.2 104 30.8
MBI11_g25856_MAGBIO Magnolia biondii HOM05D001013 ORTHO05D001703 1.4e-07 61.2 126 28.6
Cfa020510 Carpinus fangiana HOM05D000101 ORTHO05D000089 1.8e-07 60.8 103 36.9
Thecc.07G072600 Theobroma cacao HOM05D000101 ORTHO05D000089 1.8e-07 60.8 134 29.9
Ciclev10026931m.g Citrus clementina HOM05D000101 ORTHO05D000089 2.4e-07 60.5 135 28.9
Ciclev10027601m.g Citrus clementina HOM05D000101 ORTHO05D000089 3.1e-07 60.1 103 35.0
Gohir.A11G285400 Gossypium hirsutum HOM05D000101 ORTHO05D000089 3.1e-07 60.1 133 30.1
Rhsim09G0132900 Rhododendron simsii HOM05D000092 ORTHO05D000042 3.1e-07 60.1 89 41.6
MBI11_g05438_MAGBIO Magnolia biondii HOM05D000101 ORTHO05D000089 4.1e-07 59.7 102 33.3
Rhsim04G0017900 Rhododendron simsii HOM05D000101 ORTHO05D000089 4.1e-07 59.7 110 31.8
CSS0004355 Camellia sinensis var. sinensis HOM05D000101 ORTHO05D000089 5.3e-07 59.3 135 29.6
AUR62029339 Chenopodium quinoa HOM05D000101 ORTHO05D000089 1.2e-06 58.2 99 28.3
Haze_09523 Corylus avellana HOM05D000101 ORTHO05D000089 1.2e-06 58.2 103 36.9
Duzib187G0797 Durio zibethinus HOM05D000101 ORTHO05D000089 1.2e-06 58.2 134 29.9
Duzib268G1835 Durio zibethinus HOM05D000101 ORTHO05D000089 1.2e-06 58.2 104 33.7
Rhsim11G0119000 Rhododendron simsii HOM05D000101 ORTHO05D000089 1.2e-06 58.2 113 38.9
COL.COLO4_09471 Corchorus olitorius HOM05D000101 ORTHO05D000089 1.5e-06 57.8 104 34.6
QL08p018201 Quercus lobata HOM05D000101 ORTHO05D000089 1.5e-06 57.8 109 33.0
Dinv00143 Davidia involucrata HOM05D000101 ORTHO05D000089 2.0e-06 57.4 98 33.7
Thecc.07G078600 Theobroma cacao HOM05D000101 ORTHO05D000089 2.0e-06 57.4 134 30.6
CiPaw.09G122200 Carya illinoinensis HOM05D000101 ORTHO05D000089 2.6e-06 57.0 107 28.0
Ciclev10024821m.g Citrus clementina HOM05D000101 ORTHO05D000089 2.6e-06 57.0 103 35.9
Gohir.D05G350200 Gossypium hirsutum HOM05D000101 ORTHO05D000089 2.6e-06 57.0 113 34.5
Gorai.009G380000 Gossypium raimondii HOM05D000101 ORTHO05D000089 2.6e-06 57.0 113 34.5
MBI11_g05440_MAGBIO Magnolia biondii HOM05D000101 ORTHO05D000089 2.6e-06 57.0 96 33.3
MBI11_g05452_MAGBIO Magnolia biondii HOM05D000101 ORTHO05D000089 2.6e-06 57.0 102 29.4
Dinv19546 Davidia involucrata HOM05D000101 ORTHO05D000089 3.4e-06 56.6 98 31.6
QL08p018598 Quercus lobata HOM05D000101 ORTHO05D000089 4.5e-06 56.2 103 34.0
Thecc.07G078200 Theobroma cacao HOM05D000101 ORTHO05D000089 4.5e-06 56.2 138 29.7
PGR031G0716 Punica granatum HOM05D000101 ORTHO05D000089 5.9e-06 55.8 137 28.5
QL02p080444 Quercus lobata HOM05D000101 ORTHO05D000089 5.9e-06 55.8 108 32.4
AUR62030791 Chenopodium quinoa HOM05D000101 ORTHO05D000089 7.7e-06 55.5 133 27.1
QL93p2023_0071 Quercus lobata HOM05D000101 ORTHO05D000089 7.7e-06 55.5 103 34.0


User provided reference genes

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