Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0039966 Camellia sinensis var. sinensis HOM05D004589 ORTHO05D005848 6.0e-89 330.9 173 100.0
CSS0038938 Camellia sinensis var. sinensis HOM05D004589 ORTHO05D005848 2.1e-70 269.2 206 75.2
Actinidia23085 Actinidia chinensis HOM05D004589 ORTHO05D005848 4.9e-59 231.5 208 66.3
Dinv03411 Davidia involucrata HOM05D004589 ORTHO05D005848 3.5e-57 225.3 146 81.5
vmacro22576 Vaccinium macrocarpon HOM05D004589 ORTHO05D005848 6.0e-57 224.6 207 64.7
RhsimUnG0052600 Rhododendron simsii HOM05D004589 ORTHO05D005848 3.9e-56 221.9 207 64.3
RhsimUnG0165300 Rhododendron simsii HOM05D004589 ORTHO05D005848 3.9e-56 221.9 207 64.3
Haze_21457 Corylus avellana HOM05D004589 ORTHO05D005848 1.1e-53 213.8 208 58.7
Cfa013100 Carpinus fangiana HOM05D004589 ORTHO05D005848 5.3e-53 211.5 208 58.7
QL02p020149 Quercus lobata HOM05D004589 ORTHO05D005848 2.6e-52 209.1 208 58.7
CiPaw.08G008300 Carya illinoinensis HOM05D004589 ORTHO05D005848 6.5e-51 204.5 209 60.3
Duzib150G1268 Durio zibethinus HOM05D004589 ORTHO05D005848 8.4e-51 204.1 209 58.4
Hma1.2p1_0167F.1_g073640 Hydrangea macrophylla HOM05D004589 ORTHO05D005848 8.4e-51 204.1 145 73.8
Nn2g12251 Nelumbo nucifera HOM05D004589 ORTHO05D005848 1.4e-50 203.4 149 71.8
Aqoxy7G03529 Aquilegia oxysepala HOM05D004589 ORTHO05D005848 2.1e-49 199.5 209 56.0
TWI63G0229 Tripterygium wilfordii HOM05D004589 ORTHO05D005848 2.1e-49 199.5 209 57.4
Nn8g39722 Nelumbo nucifera HOM05D004589 ORTHO05D005848 2.7e-49 199.1 146 69.9
Thecc.09G019500 Theobroma cacao HOM05D004589 ORTHO05D005848 3.5e-49 198.7 209 57.4
Lj8A732G29 Lonicera japonica HOM05D004589 ORTHO05D005848 1.3e-48 196.8 139 75.5
COL.COLO4_18916 Corchorus olitorius HOM05D004589 ORTHO05D005848 2.3e-48 196.1 209 56.5
Oeu056766.2 Olea europaea HOM05D004589 ORTHO05D005848 3.9e-48 195.3 146 71.2
PSO210G3160 Papaver somniferum HOM05D004589 ORTHO05D005848 1.1e-47 193.7 161 63.4
Glyma.14G112200 Glycine max HOM05D004589 ORTHO05D005848 1.5e-47 193.4 208 55.3
Lalb_Chr11g0075481 Lupinus albus HOM05D004589 ORTHO05D005848 1.5e-47 193.4 208 54.8
MSTRG.1735 Avicennia marina HOM05D004589 ORTHO05D005848 2.5e-47 192.6 146 69.2
Ciclev10007276m.g Citrus clementina HOM05D004589 ORTHO05D005848 4.3e-47 191.8 146 70.5
Gorai.001G035900 Gossypium raimondii HOM05D004589 ORTHO05D005848 4.3e-47 191.8 209 56.5
Gohir.D07G034250 Gossypium hirsutum HOM05D004589 ORTHO05D005848 5.7e-47 191.4 209 56.5
Gorai.010G117200 Gossypium raimondii HOM05D004589 ORTHO05D005848 7.4e-47 191.0 212 52.8
Glyma.17G215700 Glycine max HOM05D004589 ORTHO05D005848 9.7e-47 190.7 208 54.3
Gohir.A07G030400 Gossypium hirsutum HOM05D004589 ORTHO05D005848 9.7e-47 190.7 209 56.0
Lj5g0022357 Lotus japonicus HOM05D004589 ORTHO05D005848 9.7e-47 190.7 208 54.3
Phvul.001G047300 Phaseolus vulgaris HOM05D004589 ORTHO05D005848 1.3e-46 190.3 208 53.8
FAN15G2875 Fragaria x ananassa HOM05D004589 ORTHO05D005848 2.8e-46 189.1 145 66.2
Gohir.D06G102200 Gossypium hirsutum HOM05D004589 ORTHO05D005848 3.7e-46 188.7 212 52.4
Prupe.1G486400 Prunus persica HOM05D004589 ORTHO05D005848 4.8e-46 188.3 145 70.3
RcHm_v2.0_Chr6g0297201 Rosa chinensis HOM05D004589 ORTHO05D005848 4.8e-46 188.3 160 62.5
VMungo0647G1846 Vigna mungo HOM05D004589 ORTHO05D005848 4.8e-46 188.3 145 66.9
FvH4_2g28290 Fragaria vesca HOM05D004589 ORTHO05D005848 6.3e-46 188.0 208 52.4
FAN24G2656 Fragaria x ananassa HOM05D004589 ORTHO05D005848 6.3e-46 188.0 208 52.4
FAN27G1181 Fragaria x ananassa HOM05D004589 ORTHO05D005848 6.3e-46 188.0 145 65.5
arahy.Tifrunner.gnm1.ann1.JQP3NY Arachis hypogaea HOM05D004589 ORTHO05D005848 8.2e-46 187.6 204 54.4
Peaxi162Scf00430g00220 Petunia axillaris HOM05D004589 ORTHO05D005848 1.1e-45 187.2 203 55.7
FAN20G1713 Fragaria x ananassa HOM05D004589 ORTHO05D005848 1.4e-45 186.8 145 66.2
MD15G1131100 Malus domestica HOM05D004589 ORTHO05D005848 1.4e-45 186.8 145 69.0
Gohir.A06G100000 Gossypium hirsutum HOM05D004589 ORTHO05D005848 4.1e-45 185.3 212 51.4
arahy.Tifrunner.gnm1.ann1.PKKG09 Arachis hypogaea HOM05D004589 ORTHO05D005848 5.3e-45 184.9 204 53.9
Migut.E01823 Erythranthe guttata HOM05D004589 ORTHO05D005848 5.3e-45 184.9 147 66.7
CDE05G2463 Ceratophyllum demersum HOM05D004589 ORTHO05D005848 6.9e-45 184.5 156 62.2
DCAR_021911 Daucus carota HOM05D004589 ORTHO05D005848 6.9e-45 184.5 145 67.6
Solyc06g065840.3 Solanum lycopersicum HOM05D004589 ORTHO05D005848 1.5e-44 183.3 202 54.5
Potri.018G022500 Populus trichocarpa HOM05D004589 ORTHO05D005848 2.0e-44 183.0 145 67.6
Ca_13043_v3 Cicer arietinum L. HOM05D004589 ORTHO05D005848 2.6e-44 182.6 208 52.4
Sc23g0006530 Simmondsia chinensis HOM05D004589 ORTHO05D005848 2.6e-44 182.6 145 65.5
Potri.006G259500 Populus trichocarpa HOM05D004589 ORTHO05D005848 3.4e-44 182.2 145 67.6
Cc08_g00190 Coffea canephora HOM05D004589 ORTHO05D005848 4.5e-44 181.8 146 65.1
Nitab4.5_0003811g0060 Nicotiana tabacum HOM05D004589 ORTHO05D005848 4.5e-44 181.8 148 66.2
Sopen06g024330 Solanum pennellii HOM05D004589 ORTHO05D005848 4.5e-44 181.8 202 54.0
Ah.16g104820 Amaranthus hybridus HOM05D004589 ORTHO05D005848 5.9e-44 181.4 139 67.6
BraA10t44722Z Brassica rapa HOM05D004589 ORTHO05D005848 1.0e-43 180.6 208 52.4
Medtr1g012980 Medicago truncatula HOM05D004589 ORTHO05D005848 1.3e-43 180.3 208 51.4
Nitab4.5_0002503g0050 Nicotiana tabacum HOM05D004589 ORTHO05D005848 1.7e-43 179.9 146 66.4
THA.LOC104799036 Tarenaya hassleriana HOM05D004589 ORTHO05D005848 1.7e-43 179.9 139 68.3
CARHR202250 Cardamine hirsuta HOM05D004589 ORTHO05D005848 2.2e-43 179.5 208 51.9
Eucgr.C02726 Eucalyptus grandis HOM05D004589 ORTHO05D005848 2.9e-43 179.1 146 65.8
Hund04463 Selenicereus undatus HOM05D004589 ORTHO05D005848 2.9e-43 179.1 145 65.5
TPR.G38909 Trifolium pratense HOM05D004589 ORTHO05D005848 2.9e-43 179.1 145 62.8
AL6G21660 Arabidopsis lyrata HOM05D004589 ORTHO05D005848 3.8e-43 178.7 145 63.4
A10p26640 Brassica napus HOM05D004589 ORTHO05D005848 3.8e-43 178.7 208 51.9
BcaC04g19264 Brassica carinata HOM05D004589 ORTHO05D005848 5.0e-43 178.3 208 51.9
C09p65810 Brassica napus HOM05D004589 ORTHO05D005848 5.0e-43 178.3 208 51.9
BolC9t59402H Brassica oleracea HOM05D004589 ORTHO05D005848 5.0e-43 178.3 208 51.9
AUR62012448 Chenopodium quinoa HOM05D004589 ORTHO05D005848 6.5e-43 177.9 145 63.4
EL10Ac2g04152 Beta vulgaris HOM05D004589 ORTHO05D005848 8.5e-43 177.6 208 52.4
Thhalv10012483m.g Eutrema salsugineum HOM05D004589 ORTHO05D005848 8.5e-43 177.6 139 65.5
PGR044G0530 Punica granatum HOM05D004589 ORTHO05D005848 8.5e-43 177.6 146 63.0
ECA248G0813 Erigeron canadensis HOM05D004589 ORTHO05D005848 1.1e-42 177.2 135 68.1
Sp6g32450 Schrenkiella parvula HOM05D004589 ORTHO05D005848 1.1e-42 177.2 208 52.4
AT5G11040 Arabidopsis thaliana HOM05D004589 ORTHO05D005848 1.4e-42 176.8 145 62.8
Psat6g028520 Pisum sativum HOM05D004589 ORTHO05D005848 1.4e-42 176.8 206 49.5
Carub.0006s0955 Capsella rubella HOM05D004589 ORTHO05D005848 1.9e-42 176.4 145 63.4
CAN.G199.72 Capsicum annuum HOM05D004589 ORTHO05D005848 1.9e-42 176.4 203 54.2
AUR62031571 Chenopodium quinoa HOM05D004589 ORTHO05D005848 2.5e-42 176.0 145 63.4
CANSAT11G1771 Cannabis sativa HOM05D004589 ORTHO05D005848 4.2e-42 175.3 208 51.9
ATR0629G049 Amborella trichopoda HOM05D004589 ORTHO05D005848 5.5e-42 174.9 147 61.9
Aa31LG3G16090 Aethionema arabicum HOM05D004589 ORTHO05D005848 7.2e-42 174.5 145 64.1
MELO3C016987.2 Cucumis melo HOM05D004589 ORTHO05D005848 7.2e-42 174.5 145 63.4
GSVIVG01035919001 Vitis vinifera HOM05D004589 ORTHO05D005848 7.2e-42 174.5 133 69.2
CsaV3_4G036860 Cucumis sativus L. HOM05D004589 ORTHO05D005848 9.4e-42 174.1 145 62.8
ClCG05G016580 Citrullus lanatus HOM05D004589 ORTHO05D005848 4.6e-41 171.8 208 49.5
ECA246G2532 Erigeron canadensis HOM05D004589 ORTHO05D005848 1.0e-40 170.6 205 52.2
Zm00001eb078140 Zea mays HOM05D004589 ORTHO05D005848 8.8e-40 167.5 139 63.3
unitig_32.g11113 Utricularia gibba HOM05D004589 ORTHO05D005848 1.1e-39 167.2 139 62.6
SGA_v2.0_scaffold85G26586 Striga asiatica HOM05D004589 ORTHO05D005848 1.5e-39 166.8 139 66.9
Sed0004204 Sechium edule HOM05D004589 ORTHO05D005848 2.5e-39 166.0 139 63.3
Manes.16G126200 Manihot esculenta HOM05D004589 ORTHO05D005848 2.2e-38 162.9 145 62.1
Lsat_1_v5_gn_6_115440 Lactuca sativa HOM05D004589 ORTHO05D005848 3.7e-38 162.2 184 53.3
Os04g0502200 Oryza sativa ssp. japonica HOM05D004589 ORTHO05D005848 4.8e-38 161.8 151 60.9
HanXRQChr16g0511131 Helianthus annuus HOM05D004589 ORTHO05D005848 2.4e-37 159.5 144 61.8
HanXRQChr01g0030641 Helianthus annuus HOM05D004589 ORTHO05D005848 1.0e-35 154.1 189 50.8
Atru.chr7.2502 Acer truncatum HOM05D004589 ORTHO05D005848 1.4e-34 150.2 179 54.7
Mapoly0001s0490 Marchantia polymorpha HOM05D004589 ORTHO05D005848 2.4e-29 132.9 184 42.9
Pp3c19_10170 Physcomitrium patens HOM05D004589 ORTHO05D005848 1.5e-28 130.2 170 44.7
Zm00001eb426010 Zea mays HOM05D004589 ORTHO05D005848 3.5e-28 129.0 125 57.6
AagrBONN_evm.TU.Sc2ySwM_368.2742 Anthoceros agrestis HOM05D004589 ORTHO05D005848 4.5e-28 128.6 151 47.7
HPP92_024788 Vanilla planifolia HOM05D004589 ORTHO05D005848 7.7e-28 127.9 139 46.8
Lsat_1_v5_gn_1_43861 Lactuca sativa HOM05D004589 ORTHO05D005848 1.7e-27 126.7 120 60.8
HPP92_020311 Vanilla planifolia HOM05D004589 ORTHO05D005848 8.5e-27 124.4 145 50.3
Pp3c22_21520 Physcomitrium patens HOM05D004589 ORTHO05D005848 1.1e-26 124.0 160 45.6
TAR383G0934 Trochodendron aralioides HOM05D004589 ORTHO05D005848 5.5e-26 121.7 92 68.5
TWI34G0107 Tripterygium wilfordii HOM05D004589 ORTHO05D005848 7.0e-21 104.8 92 66.3
arahy.Tifrunner.gnm1.ann1.6TA6W9 Arachis hypogaea HOM05D004589 ORTHO05D005848 3.5e-20 102.4 92 57.6
Medtr7g069440 Medicago truncatula HOM05D004589 ORTHO05D005848 1.0e-19 100.9 90 55.6
arahy.Tifrunner.gnm1.ann1.6PY749 Arachis hypogaea HOM05D004589 ORTHO05D005848 4.2e-18 95.5 91 53.8
SMO361G0208 Selaginella moellendorffii HOM05D004589 ORTHO05D005848 8.8e-16 87.8 137 37.2
SMO364G0672 Selaginella moellendorffii HOM05D004589 ORTHO05D005848 8.8e-16 87.8 141 34.0
CBR_g36903 Chara braunii HOM05D004589 ORTHO05D005848 9.8e-15 84.3 220 29.5
SMO199G0047 Selaginella moellendorffii HOM05D004589 ORTHO05D005848 1.3e-14 84.0 136 36.0
Cpa.g.sc187.28 Carica papaya HOM05D004589 ORTHO05D005848 2.9e-11 72.8 44 77.3
Dinv28429 Davidia involucrata HOM05D004589 ORTHO05D178633 1.8e-08 63.5 47 72.3


User provided reference genes

Program Settings