Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0039937 Camellia sinensis var. sinensis HOM05D007952 ORTHO05D009823 1.7e-60 235.7 114 100.0
Atru.chr13.2454 Acer truncatum HOM05D007952 ORTHO05D009823 1.7e-52 209.1 112 91.1
Nn029s41587 Nelumbo nucifera HOM05D007952 ORTHO05D009823 5.0e-52 207.6 124 86.3
Nn064s42224 Nelumbo nucifera HOM05D007952 ORTHO05D009823 5.0e-52 207.6 124 86.3
Nn206s45068 Nelumbo nucifera HOM05D007952 ORTHO05D009823 5.0e-52 207.6 124 86.3
Nn219s45283 Nelumbo nucifera HOM05D007952 ORTHO05D009823 5.0e-52 207.6 124 86.3
Lsat_1_v5_gn_4_99801 Lactuca sativa HOM05D007952 ORTHO05D009823 4.1e-46 188.0 114 85.1
PGSC0003DMG400028997 Solanum tuberosum HOM05D007952 ORTHO05D009823 4.1e-46 188.0 114 85.1
PGSC0003DMG400035391 Solanum tuberosum HOM05D007952 ORTHO05D009823 4.1e-46 188.0 114 85.1
Oeu020621.1 Olea europaea HOM05D007952 ORTHO05D009823 3.0e-44 181.8 114 81.6
arahy.Tifrunner.gnm1.ann1.0845WK Arachis hypogaea HOM05D007952 ORTHO05D009823 5.0e-44 181.0 97 89.7
arahy.Tifrunner.gnm1.ann1.88RRM9 Arachis hypogaea HOM05D007952 ORTHO05D009823 5.0e-44 181.0 97 89.7
Lsat_1_v5_gn_4_63021 Lactuca sativa HOM05D007952 ORTHO05D009823 6.6e-44 180.6 113 81.4
Nn5g29057 Nelumbo nucifera HOM05D007952 ORTHO05D009823 8.6e-44 180.3 114 83.3
ECA247G0757 Erigeron canadensis HOM05D000006 ORTHO05D000001 1.9e-43 179.1 113 81.4
Medtr0002s0270 Medicago truncatula HOM05D007952 ORTHO05D009823 1.9e-43 179.1 114 81.6
Sc01g0006530 Simmondsia chinensis HOM05D007952 ORTHO05D009823 4.3e-43 177.9 114 81.6
arahy.Tifrunner.gnm1.ann1.HDQ4NC Arachis hypogaea HOM05D007952 ORTHO05D009823 1.6e-42 176.0 97 86.6
ECA246G1432 Erigeron canadensis HOM05D007952 ORTHO05D009823 9.2e-38 160.2 114 76.3
Medtr3g035635 Medicago truncatula HOM05D007952 ORTHO05D009823 2.3e-36 155.6 92 82.6
Sc04g0003580 Simmondsia chinensis HOM05D007952 ORTHO05D009823 3.0e-36 155.2 108 75.0
arahy.Tifrunner.gnm1.ann1.J5KLX8 Arachis hypogaea HOM05D007952 ORTHO05D009823 6.6e-36 154.1 116 69.0
arahy.Tifrunner.gnm1.ann1.XUIM66 Arachis hypogaea HOM05D007952 ORTHO05D009823 7.3e-35 150.6 100 77.0
EL10Ac6g15366 Beta vulgaris HOM05D007952 ORTHO05D009823 7.3e-35 150.6 102 76.5
MBI08_g48227_MAGBIO Magnolia biondii HOM05D007952 ORTHO05D009823 7.3e-35 150.6 74 97.3
Peaxi162Scf00987g00215 Petunia axillaris HOM05D007952 ORTHO05D009823 7.3e-35 150.6 74 97.3
unitig_87.g27919 Utricularia gibba HOM05D007952 ORTHO05D009823 7.3e-35 150.6 74 97.3
unitig_87.g28035 Utricularia gibba HOM05D007952 ORTHO05D009823 7.3e-35 150.6 74 97.3
unitig_91.g26519 Utricularia gibba HOM05D007952 ORTHO05D009823 7.3e-35 150.6 74 97.3
arahy.Tifrunner.gnm1.ann1.RE2PS1 Arachis hypogaea HOM05D007952 ORTHO05D009823 1.2e-34 149.8 92 81.5
Lj1g0013448 Lotus japonicus HOM05D007952 ORTHO05D009823 1.2e-34 149.8 89 84.3
arahy.Tifrunner.gnm1.ann1.GIFH8E Arachis hypogaea HOM05D007952 ORTHO05D009823 1.6e-34 149.4 92 81.5
Migut.D01400 Erythranthe guttata HOM05D007952 ORTHO05D009823 1.6e-34 149.4 72 98.6
arahy.Tifrunner.gnm1.ann1.TT5YJH Arachis hypogaea HOM05D007952 ORTHO05D009823 3.6e-34 148.3 95 77.9
EL10As10g23962 Beta vulgaris HOM05D007952 ORTHO05D009823 1.8e-33 146.0 74 95.9
Lj2C1239G84 Lonicera japonica HOM05D007952 ORTHO05D009823 1.8e-33 146.0 73 97.3
BcaB02g11353 Brassica carinata HOM05D007952 ORTHO05D009823 2.6e-32 142.1 68 97.1
Atru.chr9.365 Acer truncatum HOM05D007952 ORTHO05D009823 3.4e-32 141.7 73 93.2
Medtr4g006040 Medicago truncatula HOM05D008037 ORTHO05D009823 2.4e-30 135.6 83 79.5
Sc23g0003910 Simmondsia chinensis HOM05D007952 ORTHO05D009823 2.4e-30 135.6 74 89.2
SEGI_38349 Sequoiadendron giganteum HOM05D007952 ORTHO05D009823 6.0e-29 131.0 82 80.5
BolSC44t60812H Brassica oleracea HOM05D007952 ORTHO05D009823 7.8e-29 130.6 83 79.5
arahy.Tifrunner.gnm1.ann1.PHD7EH Arachis hypogaea HOM05D007952 ORTHO05D009823 3.3e-27 125.2 92 69.6
Nitab4.5_0004552g0010 Nicotiana tabacum HOM05D000796 ORTHO05D009823 3.3e-27 125.2 99 67.7
SEGI_08440 Sequoiadendron giganteum HOM05D007952 ORTHO05D009823 3.3e-27 125.2 97 70.1
SEGI_09919 Sequoiadendron giganteum HOM05D007952 ORTHO05D009823 3.3e-27 125.2 97 70.1
SEGI_21867 Sequoiadendron giganteum HOM05D007952 ORTHO05D009823 3.3e-27 125.2 97 70.1
Nn6g32821 Nelumbo nucifera HOM05D007952 ORTHO05D009823 2.8e-26 122.1 61 95.1
Nn6g32826 Nelumbo nucifera HOM05D007952 ORTHO05D009823 2.8e-26 122.1 61 95.1
ECA232G1868 Erigeron canadensis HOM05D000002 ORTHO05D002065 1.4e-25 119.8 74 75.7
Sc21g0004590 Simmondsia chinensis HOM05D007952 ORTHO05D009823 3.1e-25 118.6 105 61.9
Hma1.2p1_0594F.1_g185798 Hydrangea macrophylla HOM05D007952 ORTHO05D009823 1.5e-24 116.3 56 96.4
Nn6g33130 Nelumbo nucifera HOM05D007952 ORTHO05D009823 1.3e-23 113.2 56 96.4
Oeu022560.1 Olea europaea HOM05D007952 ORTHO05D009823 2.2e-23 112.5 67 79.1
Psat0ss8367g0160 Pisum sativum HOM05D001387 ORTHO05D001250 2.7e-21 105.5 88 61.4
Lj4g0016112 Lotus japonicus HOM05D007952 ORTHO05D009823 1.1e-19 100.1 66 78.8
Nitab4.5_0007400g0010 Nicotiana tabacum HOM05D007952 ORTHO05D009823 1.5e-19 99.8 74 68.9
CAN.G262.4 Capsicum annuum HOM05D007952 ORTHO05D009823 1.3e-18 96.7 79 65.8
Ca_02733_v3 Cicer arietinum L. HOM05D008016 ORTHO05D009823 3.6e-18 95.1 80 63.8
DCAR_004958 Daucus carota HOM05D007952 ORTHO05D009823 3.1e-17 92.0 65 73.8
Potri.005G037850 Populus trichocarpa HOM05D007952 ORTHO05D009823 6.9e-17 90.9 64 70.3
Sopen11g014330 Solanum pennellii HOM05D000743 ORTHO05D000580 6.9e-17 90.9 75 65.3
Oeu000007.1 Olea europaea HOM05D007952 ORTHO05D009823 3.4e-16 88.6 73 60.3
arahy.Tifrunner.gnm1.ann1.9E5EUV Arachis hypogaea HOM05D000388 ORTHO05D000473 4.5e-16 88.2 62 74.2
CBR_g12953 Chara braunii HOM05D000019 ORTHO05D000048 9.9e-16 87.0 55 74.5
BcaC04g20704 Brassica carinata HOM05D007952 ORTHO05D009823 3.8e-15 85.1 39 94.9
Phvul.009G038333 Phaseolus vulgaris HOM05D007952 ORTHO05D009823 4.2e-14 81.6 41 92.7
TPR.G32110 Trifolium pratense HOM05D006259 ORTHO05D007804 4.2e-14 81.6 78 55.1
Nn031s41604 Nelumbo nucifera HOM05D007952 ORTHO05D009823 5.4e-14 81.3 41 92.7
Nn233s45560 Nelumbo nucifera HOM05D007952 ORTHO05D009823 5.4e-14 81.3 41 92.7
Nn241s45689 Nelumbo nucifera HOM05D007952 ORTHO05D009823 5.4e-14 81.3 41 92.7
Nn6g33131 Nelumbo nucifera HOM05D007952 ORTHO05D009823 5.4e-14 81.3 41 92.7
Nn6g33484 Nelumbo nucifera HOM05D007952 ORTHO05D009823 5.4e-14 81.3 41 92.7
arahy.Tifrunner.gnm1.ann1.B37VQ6 Arachis hypogaea HOM05D007952 ORTHO05D009823 7.1e-14 80.9 65 64.6
CAN.G1186.47 Capsicum annuum HOM05D007952 ORTHO05D009823 3.5e-13 78.6 70 60.0
SEGI_02200 Sequoiadendron giganteum HOM05D007952 ORTHO05D009823 3.5e-13 78.6 65 64.6
SEGI_20804 Sequoiadendron giganteum HOM05D007952 ORTHO05D009823 4.6e-13 78.2 75 58.7
Nn1g08228 Nelumbo nucifera HOM05D007952 ORTHO05D009823 7.9e-13 77.4 41 87.8
Nitab4.5_0007025g0020 Nicotiana tabacum HOM05D001226 ORTHO05D009823 7.9e-13 77.4 55 69.1
Peaxi162Scf00002g00723 Petunia axillaris HOM05D007952 ORTHO05D009823 1.3e-12 76.6 68 57.4
arahy.Tifrunner.gnm1.ann1.4P2RM7 Arachis hypogaea HOM05D005034 ORTHO05D006234 1.8e-12 76.3 40 90.0
arahy.Tifrunner.gnm1.ann1.60YYL0 Arachis hypogaea HOM05D010190 ORTHO05D009823 2.3e-12 75.9 114 46.5
BolSC91t61267H Brassica oleracea HOM05D007952 ORTHO05D009823 1.9e-11 72.8 52 76.9
Oeu012768.1 Olea europaea HOM05D007952 ORTHO05D009823 7.4e-11 70.9 69 59.4
SEGI_35056 Sequoiadendron giganteum HOM05D007952 ORTHO05D009823 9.0e-09 63.9 56 58.9
TPR.G7850 Trifolium pratense HOM05D008490 ORTHO05D010725 2.0e-08 62.8 146 33.6
ECA236G0169 Erigeron canadensis HOM05D000353 ORTHO05D000174 2.6e-08 62.4 58 60.3
CAN.G8.21 Capsicum annuum HOM05D000580 ORTHO05D001362 2.2e-07 59.3 86 40.7
Sed0000469 Sechium edule HOM05D010190 ORTHO05D009823 2.2e-07 59.3 52 65.4
Sed0006309 Sechium edule HOM05D010190 ORTHO05D009823 2.2e-07 59.3 52 65.4
CAN.G676.33 Capsicum annuum HOM05D004316 ORTHO05D005149 4.9e-07 58.2 42 71.4
BolC6t36075H Brassica oleracea HOM05D000963 ORTHO05D009823 6.4e-07 57.8 29 82.8
Actinidia30703 Actinidia chinensis HOM05D001966 ORTHO05D009823 1.1e-06 57.0 65 52.3
Actinidia28243 Actinidia chinensis HOM05D006096 ORTHO05D009823 1.9e-06 56.2 37 73.0
Atru.chr9.2550 Acer truncatum HOM05D010190 ORTHO05D009823 3.2e-06 55.5 52 59.6
Oeu011728.3 Olea europaea HOM05D002681 ORTHO05D003372 5.5e-06 54.7 29 89.7
Sed0014465 Sechium edule HOM05D010190 ORTHO05D004271 5.5e-06 54.7 52 61.5
Medtr3g028290 Medicago truncatula HOM05D007952 ORTHO05D009823 9.3e-06 53.9 30 83.3


User provided reference genes

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