Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0039876 Camellia sinensis var. sinensis HOM05D011157 ORTHO05D013820 2.0e-147 525.8 275 100.0
CSS0024493 Camellia sinensis var. sinensis HOM05D011157 ORTHO05D013820 1.4e-132 476.5 279 91.0
CSS0047522 Camellia sinensis var. sinensis HOM05D011157 ORTHO05D013820 6.1e-112 407.9 278 82.0
CSS0030944 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 4.8e-64 248.8 312 53.2
CSS0050237 Camellia sinensis var. sinensis HOM05D011157 ORTHO05D013820 1.6e-48 197.2 153 77.1
CSS0037636 Camellia sinensis var. sinensis HOM05D011157 ORTHO05D013820 4.6e-43 179.1 194 59.8
CSS0036030 Camellia sinensis var. sinensis HOM05D011157 ORTHO05D013820 2.2e-37 160.2 180 58.9
CSS0013976 Camellia sinensis var. sinensis HOM05D011157 ORTHO05D013820 2.9e-37 159.8 180 57.8
CSS0031773 Camellia sinensis var. sinensis HOM05D011157 ORTHO05D013820 1.4e-31 141.0 136 62.5
CSS0031756 Camellia sinensis var. sinensis HOM05D011157 ORTHO05D013820 1.2e-30 137.9 126 65.1
Manes.18G145666 Manihot esculenta HOM05D000002 ORTHO05D000047 2.5e-28 130.2 263 37.3
Manes.10G073332 Manihot esculenta HOM05D000002 ORTHO05D000047 4.2e-28 129.4 257 35.8
CSS0000154 Camellia sinensis var. sinensis HOM05D011157 ORTHO05D013820 1.2e-27 127.9 145 54.5
CSS0005907 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 3.7e-24 116.3 311 30.9
Manes.09G097750 Manihot esculenta HOM05D000002 ORTHO05D000047 1.2e-22 111.3 222 34.2
CSS0038420 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.7e-19 100.1 285 33.0
CSS0045239 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 4.7e-19 99.4 263 35.0
CSS0002432 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.6e-17 93.6 297 31.6
Manes.08G119311 Manihot esculenta HOM05D011157 ORTHO05D000001 7.4e-17 92.0 212 35.4
CSS0019150 Camellia sinensis var. sinensis HOM05D000936 ORTHO05D005107 8.2e-16 88.6 319 28.2
QL12p040299 Quercus lobata HOM05D000002 ORTHO05D000001 1.1e-15 88.2 219 34.7
QL02p002557 Quercus lobata HOM05D000002 ORTHO05D000001 2.4e-15 87.0 163 42.9
CSS0006070 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 5.9e-14 82.4 52 90.4
vmacro00386 Vaccinium macrocarpon HOM05D003976 ORTHO05D004711 7.7e-14 82.0 112 42.0
vmacro04211 Vaccinium macrocarpon HOM05D002268 ORTHO05D000047 7.7e-14 82.0 112 42.0
vmacro08840 Vaccinium macrocarpon HOM05D000002 ORTHO05D000047 7.7e-14 82.0 112 42.0
ClCG11G009140 Citrullus lanatus HOM05D000002 ORTHO05D000001 2.9e-13 80.1 253 30.8
CSS0039481 Camellia sinensis var. sinensis HOM05D011276 ORTHO05D013043 3.8e-13 79.7 240 32.9
CANSAT80G2584 Cannabis sativa HOM05D000002 ORTHO05D000047 1.5e-12 77.8 257 28.0
vmacro02334 Vaccinium macrocarpon HOM05D000002 ORTHO05D000047 5.5e-12 75.9 117 37.6
TAR332G0002 Trochodendron aralioides HOM05D000002 ORTHO05D000001 6.1e-11 72.4 293 28.0
Manes.06G030033 Manihot esculenta HOM05D000002 ORTHO05D000047 2.3e-10 70.5 131 37.4
Thecc.08G074900 Theobroma cacao HOM05D011157 ORTHO05D013820 4.0e-10 69.7 157 37.6
CSS0050489 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.5e-09 67.8 240 27.5
CSS0004984 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.0e-09 67.4 266 26.7
HPP92_028162 Vanilla planifolia HOM05D005168 ORTHO05D006358 2.6e-09 67.0 340 24.7
CSS0031115 Camellia sinensis var. sinensis HOM05D011276 ORTHO05D013043 4.4e-09 66.2 286 29.0
Nn5g30897 Nelumbo nucifera HOM05D000002 ORTHO05D000047 5.7e-09 65.9 246 27.6
ClCG11G008610 Citrullus lanatus HOM05D000002 ORTHO05D000001 1.3e-08 64.7 180 33.9
ClCG02G008720 Citrullus lanatus HOM05D000002 ORTHO05D000001 2.2e-08 63.9 243 30.9
Manes.07G095804 Manihot esculenta HOM05D000002 ORTHO05D000047 2.8e-08 63.5 160 34.4
CSS0017883 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 3.7e-08 63.2 267 25.5
CSS0029482 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 4.8e-08 62.8 269 24.5
CSS0000519 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.1e-07 61.6 267 25.1
Hma1.2p1_0053F.1_g030910 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 1.1e-07 61.6 246 26.8
CSS0004866 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 3.1e-07 60.1 255 27.1
CSS0011005 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 3.1e-07 60.1 255 27.1
CSS0032452 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 3.1e-07 60.1 255 27.1
CSS0038278 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 3.1e-07 60.1 255 27.1
CSS0041031 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 3.1e-07 60.1 255 27.1
CSS0048989 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 3.1e-07 60.1 255 27.1
CSS0050398 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 3.1e-07 60.1 255 27.1
Manes.14G014236 Manihot esculenta HOM05D011157 ORTHO05D000047 3.1e-07 60.1 55 43.6
CSS0017511 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 5.3e-07 59.3 255 27.1
Hma1.2p1_0164F.1_g073240 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 5.3e-07 59.3 294 23.5
Manes.11G071550 Manihot esculenta HOM05D011157 ORTHO05D013820 5.3e-07 59.3 78 47.4
Cpa.g.sc74.58 Carica papaya HOM05D011157 ORTHO05D013820 7.0e-07 58.9 140 32.1
CSS0010794 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 9.1e-07 58.5 266 24.8
VMungo1215G1550 Vigna mungo HOM05D004417 ORTHO05D005528 9.1e-07 58.5 288 26.0
CSS0004437 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 1.2e-06 58.2 95 42.1
CSS0046737 Camellia sinensis var. sinensis HOM05D011276 ORTHO05D013043 1.2e-06 58.2 115 36.5
ClCG09G007490 Citrullus lanatus HOM05D000002 ORTHO05D000001 1.6e-06 57.8 245 28.2
Ah.04g154970 Amaranthus hybridus HOM05D000002 ORTHO05D000001 2.0e-06 57.4 263 27.0
CSS0026513 Camellia sinensis var. sinensis HOM05D011276 ORTHO05D013043 2.0e-06 57.4 64 50.0
ClCG10G009560 Citrullus lanatus HOM05D000002 ORTHO05D000001 2.7e-06 57.0 323 26.0
CSS0006946 Camellia sinensis var. sinensis HOM05D011276 ORTHO05D013043 3.5e-06 56.6 188 31.4
ClCG01G012940 Citrullus lanatus HOM05D000002 ORTHO05D000001 3.5e-06 56.6 164 29.3
vmacro17778 Vaccinium macrocarpon HOM05D000002 ORTHO05D000047 3.5e-06 56.6 41 58.5
VMungo1383G2495 Vigna mungo HOM05D002560 ORTHO05D003782 3.5e-06 56.6 321 22.4
VMungo0720G1249 Vigna mungo HOM05D000002 ORTHO05D000047 4.5e-06 56.2 229 24.5
Ah.04g160330 Amaranthus hybridus HOM05D000002 ORTHO05D000001 5.9e-06 55.8 137 34.3
ClCG04G006030 Citrullus lanatus HOM05D000002 ORTHO05D000001 5.9e-06 55.8 237 24.9
Prupe.1G241200 Prunus persica HOM05D000002 ORTHO05D000047 5.9e-06 55.8 272 26.8
CSS0024874 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 7.7e-06 55.5 275 25.1


User provided reference genes

Program Settings