Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0039809 Camellia sinensis var. sinensis HOM05D012847 ORTHO05D004854 2.8e-67 258.5 127 100.0
CSS0007537 Camellia sinensis var. sinensis HOM05D012847 ORTHO05D024711 5.8e-65 250.8 127 97.6
CSS0041785 Camellia sinensis var. sinensis HOM05D012847 ORTHO05D024711 8.3e-64 246.9 127 96.9
CSS0035511 Camellia sinensis var. sinensis HOM05D012847 ORTHO05D004854 1.9e-60 235.7 127 91.3
CSS0033051 Camellia sinensis var. sinensis HOM05D012847 ORTHO05D014920 2.9e-48 195.3 136 77.2
CSS0002196 Camellia sinensis var. sinensis HOM05D012847 ORTHO05D014920 8.4e-48 193.7 131 77.9
unitig_579.g34798 Utricularia gibba HOM05D001018 ORTHO05D000626 2.5e-28 129.0 134 60.4
unitig_807.g34417 Utricularia gibba HOM05D000920 ORTHO05D000626 4.8e-27 124.8 117 62.4
unitig_146.g30219 Utricularia gibba HOM05D000920 ORTHO05D000626 1.2e-25 120.2 134 56.7
Zm00001eb262430 Zea mays HOM05D001847 ORTHO05D004854 1.3e-24 116.7 105 65.7
Zm00001eb264000 Zea mays HOM05D000920 ORTHO05D004854 1.9e-23 112.8 107 63.6
Zm00001eb264050 Zea mays HOM05D000920 ORTHO05D004854 3.3e-20 102.1 106 60.4
unitig_791.g33060 Utricularia gibba HOM05D001018 ORTHO05D000626 1.3e-19 100.1 102 58.8
Sopen00g002260 Solanum pennellii HOM05D000920 ORTHO05D004854 3.7e-19 98.6 145 44.8
unitig_683.g34677 Utricularia gibba HOM05D000920 ORTHO05D000626 1.1e-18 97.1 100 59.0
Sopen00g001800 Solanum pennellii HOM05D000920 ORTHO05D004854 6.9e-18 94.4 96 60.4
Zm00001eb437520 Zea mays HOM05D010106 ORTHO05D000626 1.9e-15 86.3 79 59.5
A04p09260 Brassica napus HOM05D000920 ORTHO05D003704 4.2e-15 85.1 76 67.1
unitig_177.g32847 Utricularia gibba HOM05D000920 ORTHO05D004854 4.2e-15 85.1 63 73.0
PRCOL_00001067 Prasinoderma coloniale HOM05D026590 ORTHO05D024711 6.1e-14 81.3 76 60.5
PRCOL_00001107 Prasinoderma coloniale HOM05D026590 ORTHO05D024711 6.1e-14 81.3 76 60.5
BNapus_Darmor_BZH_scaffold_107p00020 Brassica napus HOM05D000920 ORTHO05D004854 7.9e-14 80.9 42 95.2
BNapus_Darmor_BZH_scaffold_107p00050 Brassica napus HOM05D000920 ORTHO05D004854 7.9e-14 80.9 42 95.2
A06p24760 Brassica napus HOM05D000920 ORTHO05D004854 6.7e-13 77.8 43 90.7
Sc21g0003270 Simmondsia chinensis HOM05D000920 ORTHO05D004854 6.7e-13 77.8 43 88.4
Lj5g0000109 Lotus japonicus HOM05D000920 ORTHO05D000626 8.8e-13 77.4 41 92.7
LjContig00488g0002218 Lotus japonicus HOM05D000920 ORTHO05D000626 8.8e-13 77.4 41 92.7
Zm00001eb262130 Zea mays HOM05D010106 ORTHO05D000626 1.5e-12 76.6 42 88.1
Zm00001eb263800 Zea mays HOM05D010106 ORTHO05D000626 1.5e-12 76.6 42 88.1
Zm00001eb263830 Zea mays HOM05D010106 ORTHO05D000626 1.5e-12 76.6 42 88.1
Zm00001eb439260 Zea mays HOM05D010106 ORTHO05D000626 1.5e-12 76.6 42 88.1
A06p24170 Brassica napus HOM05D000920 ORTHO05D000626 1.9e-12 76.3 76 63.2
A09p31370 Brassica napus HOM05D000920 ORTHO05D004854 5.7e-12 74.7 42 88.1
A06p25000 Brassica napus HOM05D000920 ORTHO05D004854 9.7e-12 73.9 42 90.5
CDE02G3641 Ceratophyllum demersum HOM05D012847 ORTHO05D014920 9.7e-12 73.9 89 53.9
CsaV3_6G018510 Cucumis sativus L. HOM05D012847 ORTHO05D014920 1.3e-11 73.6 54 70.4
Oeu043254.2 Olea europaea HOM05D000920 ORTHO05D022949 1.3e-11 73.6 41 87.8
HPP92_007077 Vanilla planifolia HOM05D000920 ORTHO05D004854 1.7e-11 73.2 158 42.4
Sc11g0005300 Simmondsia chinensis HOM05D012847 ORTHO05D014920 2.2e-11 72.8 73 57.5
unitig_161.g31392 Utricularia gibba HOM05D001018 ORTHO05D000626 2.8e-11 72.4 60 68.3
unitig_161.g31377 Utricularia gibba HOM05D000920 ORTHO05D000626 4.8e-11 71.6 102 52.0
A05p22620 Brassica napus HOM05D000920 ORTHO05D004854 6.3e-11 71.2 42 85.7
Zm00001eb436930 Zea mays HOM05D010106 ORTHO05D000626 6.3e-11 71.2 132 41.7
unitig_724.g29527 Utricularia gibba HOM05D000920 ORTHO05D004854 8.2e-11 70.9 77 59.7
A06p24460 Brassica napus HOM05D000920 ORTHO05D004854 1.4e-10 70.1 42 88.1
A05p22020 Brassica napus HOM05D000920 ORTHO05D004854 3.1e-10 68.9 43 81.4
A05p22350 Brassica napus HOM05D000920 ORTHO05D004854 3.1e-10 68.9 43 83.7
Sopen07g009370 Solanum pennellii HOM05D000920 ORTHO05D000626 5.3e-10 68.2 42 83.3
Lsat_1_v5_gn_4_174220 Lactuca sativa HOM05D012847 ORTHO05D014920 1.5e-09 66.6 70 55.7
unitig_675.g29244 Utricularia gibba HOM05D000920 ORTHO05D003704 1.5e-09 66.6 37 86.5
unitig_796.g33546 Utricularia gibba HOM05D000920 ORTHO05D000626 1.5e-09 66.6 37 86.5
A05p22260 Brassica napus HOM05D000920 ORTHO05D004854 2.6e-09 65.9 43 81.4
A05p22480 Brassica napus HOM05D000920 ORTHO05D000626 2.6e-09 65.9 38 89.5
Oeu024742.1 Olea europaea HOM05D007167 ORTHO05D001679 4.5e-09 65.1 40 80.0
CBR_g56703 Chara braunii HOM05D010018 ORTHO05D004854 7.7e-09 64.3 86 47.7
Thhalv10028160m.g Eutrema salsugineum HOM05D000920 ORTHO05D004854 1.3e-08 63.5 30 100.0
Thhalv10028221m.g Eutrema salsugineum HOM05D000920 ORTHO05D004854 1.3e-08 63.5 30 100.0
Thhalv10028284m.g Eutrema salsugineum HOM05D000920 ORTHO05D004854 1.3e-08 63.5 30 100.0
Nn085s42708 Nelumbo nucifera HOM05D000920 ORTHO05D012001 1.3e-08 63.5 30 100.0
Nn085s42709 Nelumbo nucifera HOM05D000920 ORTHO05D012001 1.3e-08 63.5 30 100.0
Nn3g20606 Nelumbo nucifera HOM05D000920 ORTHO05D012001 1.3e-08 63.5 30 100.0
Nn3g20607 Nelumbo nucifera HOM05D000920 ORTHO05D012001 1.3e-08 63.5 30 100.0
Nn5g31238 Nelumbo nucifera HOM05D000920 ORTHO05D012001 1.3e-08 63.5 30 100.0
Nn5g31239 Nelumbo nucifera HOM05D000920 ORTHO05D012001 1.3e-08 63.5 30 100.0
Nn5g31261 Nelumbo nucifera HOM05D000920 ORTHO05D012001 1.3e-08 63.5 30 100.0
Nn5g31262 Nelumbo nucifera HOM05D000920 ORTHO05D012001 1.3e-08 63.5 30 100.0
Nn6g32713 Nelumbo nucifera HOM05D000920 ORTHO05D012001 1.3e-08 63.5 30 100.0
Nn6g32714 Nelumbo nucifera HOM05D000920 ORTHO05D012001 1.3e-08 63.5 30 100.0
Nn6g32747 Nelumbo nucifera HOM05D000920 ORTHO05D012001 1.3e-08 63.5 30 100.0
Nn6g32748 Nelumbo nucifera HOM05D000920 ORTHO05D012001 1.3e-08 63.5 30 100.0
Nn6g32841 Nelumbo nucifera HOM05D000920 ORTHO05D012001 1.3e-08 63.5 30 100.0
Nn6g32842 Nelumbo nucifera HOM05D000920 ORTHO05D012001 1.3e-08 63.5 30 100.0
Nn6g32904 Nelumbo nucifera HOM05D000920 ORTHO05D012001 1.3e-08 63.5 30 100.0
Nn6g32905 Nelumbo nucifera HOM05D000920 ORTHO05D012001 1.3e-08 63.5 30 100.0
Nn6g32926 Nelumbo nucifera HOM05D000920 ORTHO05D012001 1.3e-08 63.5 30 100.0
Nn6g32927 Nelumbo nucifera HOM05D000920 ORTHO05D012001 1.3e-08 63.5 30 100.0
Nn6g32946 Nelumbo nucifera HOM05D000920 ORTHO05D012001 1.3e-08 63.5 30 100.0
Nn6g33096 Nelumbo nucifera HOM05D000920 ORTHO05D012001 1.3e-08 63.5 30 100.0
Nn6g33097 Nelumbo nucifera HOM05D000920 ORTHO05D012001 1.3e-08 63.5 30 100.0
Nn6g33155 Nelumbo nucifera HOM05D000920 ORTHO05D012001 1.3e-08 63.5 30 100.0
Nn6g33159 Nelumbo nucifera HOM05D000920 ORTHO05D012001 1.3e-08 63.5 30 100.0
Nn6g33160 Nelumbo nucifera HOM05D000920 ORTHO05D012001 1.3e-08 63.5 30 100.0
Nn6g33174 Nelumbo nucifera HOM05D000920 ORTHO05D012001 1.3e-08 63.5 30 100.0
unitig_676.g29554 Utricularia gibba HOM05D000920 ORTHO05D004854 2.2e-08 62.8 70 54.3
Zm00001eb262370 Zea mays HOM05D010106 ORTHO05D000626 2.2e-08 62.8 31 90.3
Lj6g0027271 Lotus japonicus HOM05D000920 ORTHO05D004854 3.8e-08 62.0 30 96.7
LjContig00006g0000950 Lotus japonicus HOM05D000920 ORTHO05D004854 3.8e-08 62.0 30 96.7
LjContig00006g0017690 Lotus japonicus HOM05D000920 ORTHO05D004854 3.8e-08 62.0 30 96.7
LjContig00479g0009062 Lotus japonicus HOM05D000920 ORTHO05D004854 3.8e-08 62.0 30 96.7
A06p24570 Brassica napus HOM05D000920 ORTHO05D004854 5.0e-08 61.6 43 74.4
unitig_668.g29654 Utricularia gibba HOM05D000920 ORTHO05D004854 6.5e-08 61.2 31 93.5
Rhsim05G0123800 Rhododendron simsii HOM05D000920 ORTHO05D004854 8.5e-08 60.8 29 100.0
EL10As19g24180 Beta vulgaris HOM05D000920 ORTHO05D004854 1.1e-07 60.5 31 93.5
A05p22320 Brassica napus HOM05D012847 ORTHO05D020225 1.4e-07 60.1 47 66.0
Atru.chr9.100 Acer truncatum HOM05D000920 ORTHO05D000626 4.2e-07 58.5 30 90.0
PGSC0003DMG400001030 Solanum tuberosum HOM05D000920 ORTHO05D004854 5.5e-07 58.2 40 67.5
Sc21g0003540 Simmondsia chinensis HOM05D007167 ORTHO05D000922 9.4e-07 57.4 42 69.0
Sopen00g001690 Solanum pennellii HOM05D000920 ORTHO05D000626 9.4e-07 57.4 33 84.8
BcaC08g42807 Brassica carinata HOM05D012847 ORTHO05D014920 1.6e-06 56.6 50 60.0
A05p22300 Brassica napus HOM05D000920 ORTHO05D003704 1.6e-06 56.6 47 61.7
HPP92_006525 Vanilla planifolia HOM05D000920 ORTHO05D004854 1.6e-06 56.6 63 55.6
Oeu009014.1 Olea europaea HOM05D026590 ORTHO05D004854 2.7e-06 55.8 42 71.4
A06p24120 Brassica napus HOM05D001018 ORTHO05D000626 3.6e-06 55.5 32 84.4
ECA240G4657 Erigeron canadensis HOM05D000920 ORTHO05D004854 6.1e-06 54.7 27 92.6
unitig_8.g4073 Utricularia gibba HOM05D000920 ORTHO05D004854 6.1e-06 54.7 81 46.9


User provided reference genes

Program Settings