Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0039796 Camellia sinensis var. sinensis HOM05D009830 ORTHO05D011381 8.8e-31 136.3 70 100.0
Prupe.3G212800 Prunus persica HOM05D009830 ORTHO05D011381 5.9e-11 70.5 74 58.1
CSS0034930 Camellia sinensis var. sinensis HOM05D009830 ORTHO05D011381 7.7e-11 70.1 70 64.3
CSS0039346 Camellia sinensis var. sinensis HOM05D009830 ORTHO05D011381 2.2e-10 68.6 70 62.9
Medtr3g080060 Medicago truncatula HOM05D009830 ORTHO05D011381 2.9e-10 68.2 71 52.1
Haze_12789 Corylus avellana HOM05D009830 ORTHO05D011381 8.5e-10 66.6 75 56.0
Cfa014334 Carpinus fangiana HOM05D009830 ORTHO05D011381 2.5e-09 65.1 75 54.7
Potri.014G156600 Populus trichocarpa HOM05D009830 ORTHO05D011381 2.5e-09 65.1 75 57.3
TPR.G13535 Trifolium pratense HOM05D009830 ORTHO05D011381 2.5e-09 65.1 72 52.8
CiPaw.03G157300 Carya illinoinensis HOM05D009830 ORTHO05D011381 1.2e-08 62.8 74 51.4
Phvul.008G211300 Phaseolus vulgaris HOM05D009830 ORTHO05D011381 2.1e-08 62.0 72 50.0
Glyma.02G270600 Glycine max HOM05D009830 ORTHO05D011381 4.0e-07 57.8 73 46.6
Lalb_Chr10g0105701 Lupinus albus HOM05D009830 ORTHO05D011381 4.0e-07 57.8 72 47.2
Nn1g03405 Nelumbo nucifera HOM05D009830 ORTHO05D011381 5.2e-07 57.4 76 48.7
Sabra02G0173100 Salix brachista HOM05D009830 ORTHO05D011381 1.2e-06 56.2 75 50.7
DCAR_012933 Daucus carota HOM05D009830 ORTHO05D011381 1.5e-06 55.8 93 45.2
Glyma.14G046400 Glycine max HOM05D009830 ORTHO05D011381 1.5e-06 55.8 73 49.3
Nn1g07260 Nelumbo nucifera HOM05D009830 ORTHO05D011381 1.5e-06 55.8 77 48.1
TPR.G14443 Trifolium pratense HOM05D009830 ORTHO05D011381 2.0e-06 55.5 76 51.3
Lalb_Chr04g0249881 Lupinus albus HOM05D009830 ORTHO05D011381 2.6e-06 55.1 74 47.3
Medtr5g085990 Medicago truncatula HOM05D009830 ORTHO05D011381 4.4e-06 54.3 74 47.3
RcHm_v2.0_Chr2g0158481 Rosa chinensis HOM05D009830 ORTHO05D011381 7.5e-06 53.5 86 46.5


User provided reference genes

Program Settings