Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0039790 Camellia sinensis var. sinensis HOM05D011276 ORTHO05D013043 3.1e-102 375.2 193 100.0
CSS0030070 Camellia sinensis var. sinensis HOM05D011276 ORTHO05D013043 5.3e-62 241.5 186 69.9
CSS0031468 Camellia sinensis var. sinensis HOM05D011276 ORTHO05D013043 6.3e-55 218.0 220 58.6
CSS0046737 Camellia sinensis var. sinensis HOM05D011276 ORTHO05D013043 1.7e-23 113.6 158 48.1
CSS0039818 Camellia sinensis var. sinensis HOM05D011276 ORTHO05D013043 2.2e-23 113.2 189 40.2
CSS0026513 Camellia sinensis var. sinensis HOM05D011276 ORTHO05D013043 3.7e-23 112.5 158 48.1
CSS0003799 Camellia sinensis var. sinensis HOM05D011276 ORTHO05D013043 4.1e-22 109.0 158 46.8
CSS0039991 Camellia sinensis var. sinensis HOM05D011276 ORTHO05D013043 7.0e-22 108.2 157 45.9
CSS0018666 Camellia sinensis var. sinensis HOM05D011276 ORTHO05D013043 9.2e-22 107.8 192 39.6
CSS0019150 Camellia sinensis var. sinensis HOM05D000936 ORTHO05D005107 9.5e-19 97.8 82 61.0
CSS0002432 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 3.6e-18 95.9 55 76.4
CSS0039481 Camellia sinensis var. sinensis HOM05D011276 ORTHO05D013043 2.4e-14 83.2 76 56.6
CSS0038420 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 7.1e-14 81.6 46 73.9
CSS0049066 Camellia sinensis var. sinensis HOM05D011276 ORTHO05D013043 9.2e-14 81.3 55 67.3
CSS0006946 Camellia sinensis var. sinensis HOM05D011276 ORTHO05D013043 2.7e-13 79.7 60 61.7
CSS0027002 Camellia sinensis var. sinensis HOM05D011276 ORTHO05D013043 3.0e-12 76.3 66 51.5
CSS0043509 Camellia sinensis var. sinensis HOM05D000139 ORTHO05D020258 5.6e-11 72.0 50 60.0
CSS0031115 Camellia sinensis var. sinensis HOM05D011276 ORTHO05D013043 2.3e-09 66.6 40 72.5
CSS0048496 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 5.2e-09 65.5 40 72.5
QL02p002557 Quercus lobata HOM05D000002 ORTHO05D000001 6.8e-09 65.1 61 49.2
QL12p040299 Quercus lobata HOM05D000002 ORTHO05D000001 6.8e-09 65.1 61 49.2
CSS0005907 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 8.9e-09 64.7 52 59.6
HanXRQChr14g0461781 Helianthus annuus HOM05D000002 ORTHO05D000001 7.6e-08 61.6 63 44.4
CSS0030944 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 9.9e-08 61.2 101 38.6
CSS0020802 Camellia sinensis var. sinensis HOM05D011276 ORTHO05D013043 1.3e-07 60.8 69 46.4
ECA236G5088 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.7e-07 60.5 71 38.0
ECA233G0393 Erigeron canadensis HOM05D000002 ORTHO05D000001 3.7e-07 59.3 58 41.4
ECA240G1012 Erigeron canadensis HOM05D000002 ORTHO05D000001 3.7e-07 59.3 60 41.7
ECA234G3895 Erigeron canadensis HOM05D000002 ORTHO05D000001 8.4e-07 58.2 54 46.3
AUR62010580 Chenopodium quinoa HOM05D001123 ORTHO05D000001 1.4e-06 57.4 59 39.0
ECA234G2906 Erigeron canadensis HOM05D000178 ORTHO05D000001 1.9e-06 57.0 52 46.2
ECA240G2100 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.9e-06 57.0 58 41.4
ECA246G2786 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.9e-06 57.0 52 44.2
ECA246G3853 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.9e-06 57.0 52 46.2
AUR62030950 Chenopodium quinoa HOM05D000002 ORTHO05D000001 2.4e-06 56.6 60 40.0
ECA238G0623 Erigeron canadensis HOM05D000107 ORTHO05D000001 2.4e-06 56.6 51 45.1
ECA238G4843 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.4e-06 56.6 52 44.2
AUR62012513 Chenopodium quinoa HOM05D000002 ORTHO05D000001 3.2e-06 56.2 58 39.7
RcHm_v2.0_Chr3g0453371 Rosa chinensis HOM05D000002 ORTHO05D000001 3.2e-06 56.2 70 42.9
AUR62012867 Chenopodium quinoa HOM05D000002 ORTHO05D000001 4.1e-06 55.8 58 41.4
ECA240G2791 Erigeron canadensis HOM05D000002 ORTHO05D000001 4.1e-06 55.8 51 45.1
RcHm_v2.0_Chr3g0461531 Rosa chinensis HOM05D000002 ORTHO05D000001 4.1e-06 55.8 70 42.9
RcHm_v2.0_Chr7g0196171 Rosa chinensis HOM05D000002 ORTHO05D000001 4.1e-06 55.8 70 42.9
AUR62006429 Chenopodium quinoa HOM05D000002 ORTHO05D000001 5.4e-06 55.5 52 46.2
AUR62025314 Chenopodium quinoa HOM05D000002 ORTHO05D000001 5.4e-06 55.5 52 46.2
AUR62035159 Chenopodium quinoa HOM05D000002 ORTHO05D000001 5.4e-06 55.5 52 46.2
AUR62038241 Chenopodium quinoa HOM05D000002 ORTHO05D000001 5.4e-06 55.5 52 46.2
AUR62039020 Chenopodium quinoa HOM05D000002 ORTHO05D000001 5.4e-06 55.5 52 46.2
ECA240G2129 Erigeron canadensis HOM05D000002 ORTHO05D000001 5.4e-06 55.5 58 41.4
ECA248G2087 Erigeron canadensis HOM05D000002 ORTHO05D000001 5.4e-06 55.5 51 45.1
RcHm_v2.0_Chr5g0010221 Rosa chinensis HOM05D000002 ORTHO05D000001 5.4e-06 55.5 70 42.9
ECA232G0554 Erigeron canadensis HOM05D000002 ORTHO05D000001 7.1e-06 55.1 52 46.2
ECA234G2464 Erigeron canadensis HOM05D000014 ORTHO05D000093 7.1e-06 55.1 54 42.6
RcHm_v2.0_Chr3g0463471 Rosa chinensis HOM05D000002 ORTHO05D000001 7.1e-06 55.1 65 40.0
RcHm_v2.0_Chr5g0016851 Rosa chinensis HOM05D000002 ORTHO05D000001 7.1e-06 55.1 70 42.9
AUR62008603 Chenopodium quinoa HOM05D000002 ORTHO05D000001 9.2e-06 54.7 56 41.1
AUR62033068 Chenopodium quinoa HOM05D000002 ORTHO05D000001 9.2e-06 54.7 52 46.2
ECA232G1725 Erigeron canadensis HOM05D000002 ORTHO05D000001 9.2e-06 54.7 59 39.0
ECA246G0327 Erigeron canadensis HOM05D000002 ORTHO05D000001 9.2e-06 54.7 58 41.4
ECA248G1956 Erigeron canadensis HOM05D000002 ORTHO05D000001 9.2e-06 54.7 58 41.4
HanXRQChr14g0437951 Helianthus annuus HOM05D000114 ORTHO05D000075 9.2e-06 54.7 51 43.1
RcHm_v2.0_Chr2g0166821 Rosa chinensis HOM05D000002 ORTHO05D000001 9.2e-06 54.7 65 38.5


User provided reference genes

Program Settings