Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0039773 Camellia sinensis var. sinensis HOM05D006394 ORTHO05D008057 9.7e-183 643.3 308 100.0
vmacro21917 Vaccinium macrocarpon HOM05D006394 ORTHO05D008057 1.6e-137 493.0 310 78.4
Hma1.2p1_0743F.1_g211600 Hydrangea macrophylla HOM05D006394 ORTHO05D008057 2.3e-136 489.2 303 76.9
Cpa.g.sc6.241 Carica papaya HOM05D006394 ORTHO05D008057 7.6e-119 431.0 308 68.8
Lj2C467T3 Lonicera japonica HOM05D006394 ORTHO05D008057 1.3e-118 430.3 287 73.2
Rhsim10G0213000 Rhododendron simsii HOM05D006394 ORTHO05D008057 1.9e-117 426.4 345 64.9
Actinidia28701 Actinidia chinensis HOM05D006394 ORTHO05D008057 1.0e-115 420.6 292 70.9
QL06p032614 Quercus lobata HOM05D006394 ORTHO05D008057 5.1e-115 418.3 300 67.7
Actinidia22984 Actinidia chinensis HOM05D006394 ORTHO05D008057 8.7e-107 391.0 322 62.7
Sed0000291 Sechium edule HOM05D006394 ORTHO05D008057 6.9e-104 381.3 289 63.7
GSVIVG01018789001 Vitis vinifera HOM05D006394 ORTHO05D008057 8.4e-102 374.4 322 59.9
ClCG01G020230 Citrullus lanatus HOM05D006394 ORTHO05D008057 3.9e-99 365.5 291 62.5
CiPaw.07G057900 Carya illinoinensis HOM05D006394 ORTHO05D008057 6.2e-97 358.2 320 57.2
Sabra05G0094200 Salix brachista HOM05D006394 ORTHO05D008057 3.1e-96 355.9 277 61.7
MD02G1133300 Malus domestica HOM05D006394 ORTHO05D008057 6.9e-96 354.8 278 61.5
Duzib264G0144 Durio zibethinus HOM05D006394 ORTHO05D008057 1.5e-95 353.6 322 55.6
Prupe.7G167400 Prunus persica HOM05D006394 ORTHO05D008057 9.3e-93 344.4 323 55.7
Potri.005G115100 Populus trichocarpa HOM05D006394 ORTHO05D008057 5.1e-91 338.6 319 53.6
Eucgr.J02427 Eucalyptus grandis HOM05D006394 ORTHO05D008057 3.3e-90 335.9 324 54.6
CsaV3_6G047020 Cucumis sativus L. HOM05D006394 ORTHO05D008057 2.8e-89 332.8 319 53.9
Thecc.01G019800 Theobroma cacao HOM05D006394 ORTHO05D008057 2.8e-89 332.8 322 51.9
SalBow3G1310 Salvia bowleyana HOM05D006394 ORTHO05D008057 6.2e-89 331.6 318 54.7
TAR365G0979 Trochodendron aralioides HOM05D006394 ORTHO05D008057 6.9e-88 328.2 271 62.4
MELO3C007895.2 Cucumis melo HOM05D006394 ORTHO05D008057 1.2e-87 327.4 336 52.1
VMungo0251G2040 Vigna mungo HOM05D006394 ORTHO05D008057 4.5e-87 325.5 321 53.3
MD15G1246300 Malus domestica HOM05D006394 ORTHO05D008057 7.6e-87 324.7 318 52.8
CAN.G1735.1 Capsicum annuum HOM05D006394 ORTHO05D008057 1.3e-86 323.9 317 53.6
Cc07_g10630 Coffea canephora HOM05D006394 ORTHO05D008057 1.3e-86 323.9 329 53.2
Solyc03g033560.3 Solanum lycopersicum HOM05D006394 ORTHO05D008057 2.9e-86 322.8 328 53.7
Sopen03g006350 Solanum pennellii HOM05D006394 ORTHO05D008057 2.9e-86 322.8 328 53.7
Gorai.007G195500 Gossypium raimondii HOM05D006394 ORTHO05D008057 1.1e-85 320.9 322 50.9
TPR.G30047 Trifolium pratense HOM05D006394 ORTHO05D008057 4.2e-85 318.9 291 56.4
Gohir.D11G183600 Gossypium hirsutum HOM05D006394 ORTHO05D008057 7.1e-85 318.2 322 50.6
Gohir.A11G175800 Gossypium hirsutum HOM05D006394 ORTHO05D008057 1.8e-83 313.5 322 50.3
PGSC0003DMG400022563 Solanum tuberosum HOM05D006394 ORTHO05D008057 1.8e-83 313.5 268 61.2
Gohir.A10G098200 Gossypium hirsutum HOM05D006394 ORTHO05D008057 3.0e-83 312.8 314 52.9
Gohir.D10G090000 Gossypium hirsutum HOM05D006394 ORTHO05D008057 8.7e-83 311.2 314 52.5
Ciclev10025906m.g Citrus clementina HOM05D006394 ORTHO05D008057 2.5e-82 309.7 306 52.3
Gorai.011G098800 Gossypium raimondii HOM05D006394 ORTHO05D008057 3.3e-82 309.3 313 52.4
Glyma.16G129000 Glycine max HOM05D006394 ORTHO05D008057 5.7e-82 308.5 321 51.1
Aqoxy2G01815 Aquilegia oxysepala HOM05D006394 ORTHO05D008057 2.2e-81 306.6 342 48.0
Lj4g0024758 Lotus japonicus HOM05D006394 ORTHO05D008057 2.8e-81 306.2 324 50.3
Glyma.02G048900 Glycine max HOM05D006394 ORTHO05D008057 8.2e-81 304.7 321 51.1
Peaxi162Scf00034g02720 Petunia axillaris HOM05D006394 ORTHO05D008057 8.2e-81 304.7 319 51.4
HanXRQChr14g0441351 Helianthus annuus HOM05D006394 ORTHO05D008057 1.8e-80 303.5 326 50.9
DCAR_032392 Daucus carota HOM05D006394 ORTHO05D008057 5.3e-80 302.0 327 51.1
Phvul.003G262300 Phaseolus vulgaris HOM05D006394 ORTHO05D008057 5.3e-80 302.0 255 59.6
Hma1.2p1_0589F.1_g184775 Hydrangea macrophylla HOM05D006394 ORTHO05D008057 6.9e-80 301.6 167 82.0
TAR133G0002 Trochodendron aralioides HOM05D006394 ORTHO05D008057 1.2e-79 300.8 250 60.4
CANSAT01G2157 Cannabis sativa HOM05D006394 ORTHO05D008057 1.5e-79 300.4 327 49.8
Nn6g32361 Nelumbo nucifera HOM05D006394 ORTHO05D008057 5.9e-79 298.5 312 51.6
COL.COLO4_21919 Corchorus olitorius HOM05D006394 ORTHO05D008057 3.8e-78 295.8 322 47.5
TWI53G2075 Tripterygium wilfordii HOM05D006394 ORTHO05D008057 5.0e-78 295.4 321 50.2
arahy.Tifrunner.gnm1.ann1.VDMC0V Arachis hypogaea HOM05D006394 ORTHO05D008057 6.5e-78 295.0 318 50.6
arahy.Tifrunner.gnm1.ann1.SHNU8N Arachis hypogaea HOM05D006394 ORTHO05D008057 1.9e-77 293.5 318 50.3
ECA238G0838 Erigeron canadensis HOM05D006394 ORTHO05D008057 4.2e-77 292.4 331 48.9
Ca_22372_v3 Cicer arietinum L. HOM05D006394 ORTHO05D008057 1.8e-75 287.0 321 48.3
Manes.01G145300 Manihot esculenta HOM05D006394 ORTHO05D008057 2.0e-74 283.5 236 59.7
Lalb_Chr09g0333101 Lupinus albus HOM05D006394 ORTHO05D008057 4.3e-74 282.3 321 47.0
Medtr8g075970 Medicago truncatula HOM05D006394 ORTHO05D008057 5.7e-74 282.0 325 48.3
PSO541G5117 Papaver somniferum HOM05D006394 ORTHO05D008057 9.7e-74 281.2 336 46.7
RcHm_v2.0_Chr2g0099531 Rosa chinensis HOM05D006394 ORTHO05D008057 1.7e-73 280.4 320 46.9
Haze_03772 Corylus avellana HOM05D006394 ORTHO05D008057 1.1e-72 277.7 280 52.5
Psat4g099000 Pisum sativum HOM05D006394 ORTHO05D008057 5.3e-72 275.4 322 45.7
PSO675G2528 Papaver somniferum HOM05D006394 ORTHO05D008057 6.9e-72 275.0 332 47.0
MSTRG.2708 Avicennia marina HOM05D006394 ORTHO05D008057 1.7e-70 270.4 331 46.8
FvH4_1g11930 Fragaria vesca HOM05D006394 ORTHO05D008057 1.1e-69 267.7 323 45.8
FAN26G2471 Fragaria x ananassa HOM05D006394 ORTHO05D008057 7.2e-69 265.0 323 45.5
FAN19G0259 Fragaria x ananassa HOM05D006394 ORTHO05D008057 1.6e-68 263.8 323 45.5
Dinv33624 Davidia involucrata HOM05D006394 ORTHO05D008057 6.1e-68 261.9 259 56.8
Nitab4.5_0006119g0030 Nicotiana tabacum HOM05D006394 ORTHO05D008057 1.4e-67 260.8 295 52.2
FAN28G2242 Fragaria x ananassa HOM05D006394 ORTHO05D008057 6.3e-65 251.9 318 45.0
FAN23G1778 Fragaria x ananassa HOM05D006394 ORTHO05D008057 9.1e-64 248.1 318 44.3
CDE04G0153 Ceratophyllum demersum HOM05D006394 ORTHO05D008057 2.0e-63 246.9 338 41.7
PGR102G2413 Punica granatum HOM05D006394 ORTHO05D008057 2.6e-63 246.5 318 46.2
Nitab4.5_0000438g0030 Nicotiana tabacum HOM05D006394 ORTHO05D008057 8.5e-62 241.5 347 43.5
Hund16487 Selenicereus undatus HOM05D006394 ORTHO05D008057 4.2e-61 239.2 319 44.2
Migut.H01156 Erythranthe guttata HOM05D006394 ORTHO05D008057 5.5e-61 238.8 318 45.9
Sc16g0002110 Simmondsia chinensis HOM05D006394 ORTHO05D008057 1.3e-57 227.6 286 45.1
Lsat_1_v5_gn_4_146641 Lactuca sativa HOM05D006394 ORTHO05D008057 2.8e-57 226.5 292 49.3
Os04g0110600 Oryza sativa ssp. japonica HOM05D006394 ORTHO05D008057 7.0e-56 221.9 269 45.7
Actinidia31001 Actinidia chinensis HOM05D006394 ORTHO05D008057 1.5e-53 214.2 128 79.7
Zm00001eb418470 Zea mays HOM05D006394 ORTHO05D008057 1.5e-50 204.1 270 43.3
AL3G51010 Arabidopsis lyrata HOM05D006394 ORTHO05D008057 3.7e-49 199.5 320 38.4
THA.LOC104804261 Tarenaya hassleriana HOM05D006394 ORTHO05D008057 4.8e-49 199.1 317 39.4
unitig_22.g6143 Utricularia gibba HOM05D006394 ORTHO05D008057 6.3e-49 198.7 364 35.7
Zm00001eb411540 Zea mays HOM05D006394 ORTHO05D008057 6.3e-49 198.7 270 42.6
Zm00001eb089410 Zea mays HOM05D006394 ORTHO05D008057 5.3e-48 195.7 271 42.8
Aa31LG8G15150 Aethionema arabicum HOM05D006394 ORTHO05D008057 3.5e-47 193.0 320 37.2
CARHR108450 Cardamine hirsuta HOM05D006394 ORTHO05D008057 3.5e-47 193.0 320 36.6
BcaB03g16582 Brassica carinata HOM05D006394 ORTHO05D008057 1.0e-46 191.4 323 37.5
AT2G17975 Arabidopsis thaliana HOM05D006394 ORTHO05D008057 1.3e-46 191.0 321 37.7
HPP92_007113 Vanilla planifolia HOM05D006394 ORTHO05D008057 1.7e-46 190.7 277 40.8
Sp3g31400 Schrenkiella parvula HOM05D006394 ORTHO05D008057 2.9e-46 189.9 322 39.1
Carub.0003s3211 Capsella rubella HOM05D006394 ORTHO05D008057 3.8e-46 189.5 321 37.7
SGA_v2.0_scaffold137G35082 Striga asiatica HOM05D006394 ORTHO05D008057 8.5e-46 188.3 377 36.1
Thhalv10022807m.g Eutrema salsugineum HOM05D006394 ORTHO05D008057 1.5e-45 187.6 324 38.0
C07p05000 Brassica napus HOM05D006394 ORTHO05D008057 3.4e-42 176.4 279 38.4
A07p02700 Brassica napus HOM05D006394 ORTHO05D008057 1.3e-41 174.5 180 49.4
BcaC06g36350 Brassica carinata HOM05D006394 ORTHO05D008057 1.7e-41 174.1 279 38.0
BraA07t28070Z Brassica rapa HOM05D006394 ORTHO05D008057 3.1e-40 169.9 181 49.2
BolC7t40901H Brassica oleracea HOM05D006394 ORTHO05D008057 1.6e-39 167.5 280 37.9
EL10As8g23834 Beta vulgaris HOM05D006394 ORTHO05D008057 8.9e-35 151.8 282 36.5
ATR0421G002 Amborella trichopoda HOM05D006394 ORTHO05D008057 5.2e-27 125.9 103 60.2
CDE02G2139 Ceratophyllum demersum HOM05D006394 ORTHO05D008057 4.4e-26 122.9 142 47.9
Solyc10g038030.3 Solanum lycopersicum HOM05D006394 ORTHO05D008057 9.8e-26 121.7 146 46.6
SMO347G0374 Selaginella moellendorffii HOM05D006394 ORTHO05D008057 1.6e-23 114.4 326 29.8
CBR_g22407 Chara braunii HOM05D006394 ORTHO05D008057 2.3e-22 110.5 186 39.2
Sopen04g013660 Solanum pennellii HOM05D006394 ORTHO05D008057 1.8e-19 100.9 89 57.3
Sopen04g013620 Solanum pennellii HOM05D006394 ORTHO05D008057 3.7e-17 93.2 78 60.3
unitig_8.g2966 Utricularia gibba HOM05D006394 ORTHO05D008057 1.1e-16 91.7 137 40.9
Sopen10g011120 Solanum pennellii HOM05D006394 ORTHO05D008057 7.0e-16 89.0 63 65.1
HanXRQChr01g0002841 Helianthus annuus HOM05D006394 ORTHO05D008057 4.3e-13 79.7 75 54.7
Oeu048467.1 Olea europaea HOM05D006394 ORTHO05D008057 6.2e-12 75.9 92 50.0
MBI05_g15342_MAGBIO Magnolia biondii HOM05D006394 ORTHO05D008057 8.1e-12 75.5 88 48.9
Rhsim08G0034100 Rhododendron simsii HOM05D006394 ORTHO05D008057 1.5e-10 71.2 62 62.9
CARHR118750 Cardamine hirsuta HOM05D001564 ORTHO05D001439 1.9e-08 64.3 172 29.7
TWI34G0224 Tripterygium wilfordii HOM05D001564 ORTHO05D001439 1.9e-08 64.3 156 27.6
A07p17810 Brassica napus HOM05D001564 ORTHO05D001439 2.4e-08 63.9 169 28.4
C04p24640 Brassica napus HOM05D001564 ORTHO05D001439 2.4e-08 63.9 169 28.4
BolC4t23970H Brassica oleracea HOM05D001564 ORTHO05D001439 2.4e-08 63.9 169 28.4
BraA07t29501Z Brassica rapa HOM05D001564 ORTHO05D001439 2.4e-08 63.9 169 28.4
AL6G37290 Arabidopsis lyrata HOM05D001564 ORTHO05D001439 3.2e-08 63.5 164 28.0
Eucgr.C01126 Eucalyptus grandis HOM05D001564 ORTHO05D001439 3.2e-08 63.5 151 34.4
THA.LOC104809001 Tarenaya hassleriana HOM05D001564 ORTHO05D001439 3.2e-08 63.5 158 30.4
Thhalv10005026m.g Eutrema salsugineum HOM05D001564 ORTHO05D001439 5.4e-08 62.8 164 26.8
Carub.0004s0700 Capsella rubella HOM05D001564 ORTHO05D001439 7.1e-08 62.4 158 29.7
ATR0853G001 Amborella trichopoda HOM05D006394 ORTHO05D008057 1.2e-07 61.6 94 44.7
BcaNung07111 Brassica carinata HOM05D001564 ORTHO05D001439 1.2e-07 61.6 164 26.2
C02p59490 Brassica napus HOM05D001564 ORTHO05D001439 1.2e-07 61.6 164 26.2
BolC2t12012H Brassica oleracea HOM05D001564 ORTHO05D001439 1.2e-07 61.6 164 26.2
A02p39710 Brassica napus HOM05D001564 ORTHO05D001439 1.6e-07 61.2 164 27.4
Oeu058055.1 Olea europaea HOM05D001564 ORTHO05D001439 1.6e-07 61.2 156 30.8
BraA02t08936Z Brassica rapa HOM05D001564 ORTHO05D001439 2.7e-07 60.5 164 27.4
AT5G25490 Arabidopsis thaliana HOM05D001564 ORTHO05D001439 3.5e-07 60.1 164 25.6
Os02g0203700 Oryza sativa ssp. japonica HOM05D001564 ORTHO05D001439 3.5e-07 60.1 157 28.0
Sp4g08900 Schrenkiella parvula HOM05D001564 ORTHO05D001439 4.6e-07 59.7 158 29.1
TWI63G0584 Tripterygium wilfordii HOM05D001564 ORTHO05D001439 4.6e-07 59.7 140 32.1
BcaB07g29995 Brassica carinata HOM05D001564 ORTHO05D001439 6.0e-07 59.3 164 26.8
BcaC02g10834 Brassica carinata HOM05D001564 ORTHO05D001439 6.0e-07 59.3 158 29.7
AUR62024886 Chenopodium quinoa HOM05D001564 ORTHO05D001439 6.0e-07 59.3 161 25.5
AUR62030661 Chenopodium quinoa HOM05D001564 ORTHO05D001439 6.0e-07 59.3 161 25.5
FAN15G3262 Fragaria x ananassa HOM05D001564 ORTHO05D001439 6.0e-07 59.3 162 26.5
Peaxi162Scf00641g00018 Petunia axillaris HOM05D001564 ORTHO05D001439 6.0e-07 59.3 163 29.4
AT2G26695 Arabidopsis thaliana HOM05D001564 ORTHO05D001439 7.8e-07 58.9 162 28.4
Ciclev10009893m.g Citrus clementina HOM05D001564 ORTHO05D001439 7.8e-07 58.9 144 27.8
Mapoly0019s0131 Marchantia polymorpha HOM05D001564 ORTHO05D001439 7.8e-07 58.9 166 28.9
Sed0004083 Sechium edule HOM05D001564 ORTHO05D001439 7.8e-07 58.9 150 27.3
Eucgr.C01132 Eucalyptus grandis HOM05D001564 ORTHO05D001439 1.0e-06 58.5 148 30.4
Thhalv10017402m.g Eutrema salsugineum HOM05D001564 ORTHO05D001439 1.0e-06 58.5 158 29.1
CiPaw.03G241500 Carya illinoinensis HOM05D001564 ORTHO05D001439 1.3e-06 58.2 160 28.1
MELO3C026642.2 Cucumis melo HOM05D001564 ORTHO05D001439 1.3e-06 58.2 142 26.8
CsaV3_1G029820 Cucumis sativus L. HOM05D001564 ORTHO05D001439 1.3e-06 58.2 142 26.8
MD15G1121500 Malus domestica HOM05D001564 ORTHO05D001439 1.3e-06 58.2 162 27.2
Sed0001195 Sechium edule HOM05D001564 ORTHO05D001439 1.3e-06 58.2 160 29.4
EL10Ac2g02598 Beta vulgaris HOM05D001564 ORTHO05D001439 1.7e-06 57.8 160 26.2
A06p36200 Brassica napus HOM05D001564 ORTHO05D001439 1.7e-06 57.8 159 28.3
C07p42330 Brassica napus HOM05D001564 ORTHO05D001439 1.7e-06 57.8 159 28.3
BolC7t44762H Brassica oleracea HOM05D001564 ORTHO05D001439 1.7e-06 57.8 159 28.3
BraA06t26541Z Brassica rapa HOM05D001564 ORTHO05D001439 1.7e-06 57.8 159 28.3
Manes.03G017100 Manihot esculenta HOM05D001564 ORTHO05D001439 2.3e-06 57.4 163 25.8
CANSAT11G0701 Cannabis sativa HOM05D001564 ORTHO05D001439 3.0e-06 57.0 154 25.3
Carub.0006s2335 Capsella rubella HOM05D001564 ORTHO05D001439 3.9e-06 56.6 164 25.0
DCAR_009202 Daucus carota HOM05D001564 ORTHO05D001439 3.9e-06 56.6 54 48.1
DCAR_009203 Daucus carota HOM05D001564 ORTHO05D001439 3.9e-06 56.6 54 48.1
FvH4_2g29540 Fragaria vesca HOM05D001564 ORTHO05D001439 3.9e-06 56.6 162 27.2
FAN24G1530 Fragaria x ananassa HOM05D001564 ORTHO05D001439 3.9e-06 56.6 162 27.2
Lalb_Chr08g0243981 Lupinus albus HOM05D001564 ORTHO05D001439 3.9e-06 56.6 199 26.1
MD17G1204500 Malus domestica HOM05D001564 ORTHO05D001439 3.9e-06 56.6 220 21.8
Psat1g026920 Pisum sativum HOM05D001564 ORTHO05D001439 3.9e-06 56.6 157 27.4
Rhsim01G0076900 Rhododendron simsii HOM05D001564 ORTHO05D001439 3.9e-06 56.6 155 30.3
CsaV3_4G001400 Cucumis sativus L. HOM05D001564 ORTHO05D001439 6.6e-06 55.8 160 27.5
TWI75G1763 Tripterygium wilfordii HOM05D001564 ORTHO05D001439 6.6e-06 55.8 214 24.3
Atru.chr7.1193 Acer truncatum HOM05D001564 ORTHO05D001439 8.6e-06 55.5 161 27.3
AL4G19730 Arabidopsis lyrata HOM05D001564 ORTHO05D001439 8.6e-06 55.5 161 28.0


User provided reference genes

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