Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0011685 Camellia sinensis var. sinensis HOM05D002792 ORTHO05D003039 1.3e-39 166.4 114 100.0
CSS0034746 Camellia sinensis var. sinensis HOM05D002792 ORTHO05D003039 1.3e-39 166.4 114 100.0
CSS0039761 Camellia sinensis var. sinensis HOM05D002792 ORTHO05D003039 1.3e-39 166.4 114 100.0
CSS0043613 Camellia sinensis var. sinensis HOM05D002792 ORTHO05D003039 1.3e-39 166.4 114 100.0
CSS0002691 Camellia sinensis var. sinensis HOM05D002792 ORTHO05D003039 6.4e-39 164.1 114 99.1
CSS0048808 Camellia sinensis var. sinensis HOM05D002792 ORTHO05D003039 6.4e-39 164.1 114 98.2
CSS0021625 Camellia sinensis var. sinensis HOM05D002792 ORTHO05D003039 1.1e-38 163.3 114 99.1
CSS0027278 Camellia sinensis var. sinensis HOM05D002792 ORTHO05D003039 1.9e-38 162.5 114 99.1
CSS0041878 Camellia sinensis var. sinensis HOM05D002792 ORTHO05D003039 1.9e-38 162.5 114 96.5
Dinv27907 Davidia involucrata HOM05D002792 ORTHO05D003039 1.1e-17 93.6 57 82.5
Actinidia30279 Actinidia chinensis HOM05D002792 ORTHO05D003039 9.0e-17 90.5 87 60.9
TAR626G1718 Trochodendron aralioides HOM05D002792 ORTHO05D003039 9.0e-17 90.5 54 74.1
vmacro11056 Vaccinium macrocarpon HOM05D002792 ORTHO05D003039 5.8e-16 87.8 54 81.5
Hma1.2p1_0049F.1_g028510 Hydrangea macrophylla HOM05D002792 ORTHO05D003039 9.9e-16 87.0 56 78.6
Rhsim02G0176900 Rhododendron simsii HOM05D002792 ORTHO05D003039 1.7e-15 86.3 52 82.7
CiPaw.08G026100 Carya illinoinensis HOM05D002792 ORTHO05D003039 2.2e-15 85.9 55 80.0
Cc08_g09690 Coffea canephora HOM05D002792 ORTHO05D003039 4.9e-15 84.7 87 54.0
GSVIVG01035616001 Vitis vinifera HOM05D002792 ORTHO05D003039 8.4e-15 84.0 54 77.8
CSS0012947 Camellia sinensis var. sinensis HOM05D002792 ORTHO05D003039 9.3e-14 80.5 75 64.0
Oeu043885.1 Olea europaea HOM05D002792 ORTHO05D003039 9.3e-14 80.5 87 54.0
Sc23g0005200 Simmondsia chinensis HOM05D002792 ORTHO05D003039 9.3e-14 80.5 53 71.7
Prupe.1G447600 Prunus persica HOM05D002792 ORTHO05D003039 2.7e-13 79.0 87 51.7
Ciclev10009570m.g Citrus clementina HOM05D002792 ORTHO05D003039 4.6e-13 78.2 55 76.4
Lj8A578G16 Lonicera japonica HOM05D002792 ORTHO05D003039 7.9e-13 77.4 87 50.6
FvH4_2g35470 Fragaria vesca HOM05D002792 ORTHO05D003039 1.8e-12 76.3 87 50.6
FAN20G1676 Fragaria x ananassa HOM05D002792 ORTHO05D003039 1.8e-12 76.3 87 50.6
SalBow1G0964 Salvia bowleyana HOM05D002792 ORTHO05D003039 3.0e-12 75.5 87 50.6
Lj8C574G4 Lonicera japonica HOM05D002792 ORTHO05D003039 3.9e-12 75.1 51 72.5
Thecc.09G045800 Theobroma cacao HOM05D002792 ORTHO05D003039 6.7e-12 74.3 53 69.8
FAN15G1596 Fragaria x ananassa HOM05D002792 ORTHO05D003039 8.7e-12 73.9 88 51.1
MD15G1092700 Malus domestica HOM05D002792 ORTHO05D003039 8.7e-12 73.9 48 75.0
Atru.chr7.2082 Acer truncatum HOM05D002792 ORTHO05D003039 1.1e-11 73.6 57 64.9
Nn2g11610 Nelumbo nucifera HOM05D002792 ORTHO05D003039 1.1e-11 73.6 87 47.1
Potri.006G237900 Populus trichocarpa HOM05D002792 ORTHO05D003039 1.1e-11 73.6 54 70.4
RcHm_v2.0_Chr6g0306411 Rosa chinensis HOM05D002792 ORTHO05D003039 1.1e-11 73.6 88 51.1
MELO3C003464.2 Cucumis melo HOM05D002792 ORTHO05D003039 1.5e-11 73.2 53 69.8
CsaV3_3G048550 Cucumis sativus L. HOM05D002792 ORTHO05D003039 1.5e-11 73.2 53 69.8
Sed0001182 Sechium edule HOM05D002792 ORTHO05D003039 1.5e-11 73.2 55 70.9
Lj1g0023402 Lotus japonicus HOM05D002792 ORTHO05D003039 1.9e-11 72.8 55 65.5
ClCG11G015150 Citrullus lanatus HOM05D002792 ORTHO05D003039 2.5e-11 72.4 53 69.8
DCAR_000754 Daucus carota HOM05D002792 ORTHO05D003039 2.5e-11 72.4 48 62.5
Lsat_1_v5_gn_5_33680 Lactuca sativa HOM05D002792 ORTHO05D003039 2.5e-11 72.4 53 66.0
CANSAT25G1031 Cannabis sativa HOM05D002792 ORTHO05D003039 5.6e-11 71.2 50 70.0
Eucgr.C00554 Eucalyptus grandis HOM05D002792 ORTHO05D003039 5.6e-11 71.2 46 67.4
QL12p041309 Quercus lobata HOM05D002792 ORTHO05D003039 5.6e-11 71.2 58 65.5
Sabra06G0186200 Salix brachista HOM05D002792 ORTHO05D003039 5.6e-11 71.2 54 68.5
Manes.03G059000 Manihot esculenta HOM05D002792 ORTHO05D003039 7.4e-11 70.9 55 67.3
Medtr3g109700 Medicago truncatula HOM05D002792 ORTHO05D003039 7.4e-11 70.9 54 64.8
PGSC0003DMG400002231 Solanum tuberosum HOM05D002792 ORTHO05D003039 7.4e-11 70.9 76 51.3
Lalb_Chr08g0243041 Lupinus albus HOM05D002792 ORTHO05D003039 9.6e-11 70.5 43 74.4
Phvul.009G110200 Phaseolus vulgaris HOM05D002792 ORTHO05D003039 9.6e-11 70.5 55 65.5
Nitab4.5_0001515g0040 Nicotiana tabacum HOM05D002792 ORTHO05D003039 1.3e-10 70.1 48 66.7
CAN.G400.15 Capsicum annuum HOM05D002792 ORTHO05D003039 2.1e-10 69.3 76 47.4
HanXRQChr16g0509381 Helianthus annuus HOM05D002792 ORTHO05D003039 2.1e-10 69.3 53 66.0
Hund19508 Selenicereus undatus HOM05D002792 ORTHO05D003039 2.1e-10 69.3 82 50.0
Eucgr.C00600 Eucalyptus grandis HOM05D002792 ORTHO05D003039 2.8e-10 68.9 47 68.1
Glyma.04G084600 Glycine max HOM05D002792 ORTHO05D003039 2.8e-10 68.9 53 64.2
Peaxi162Scf00227g00109 Petunia axillaris HOM05D002792 ORTHO05D003039 2.8e-10 68.9 42 73.8
Glyma.06G086200 Glycine max HOM05D002792 ORTHO05D003039 3.6e-10 68.6 55 65.5
arahy.Tifrunner.gnm1.ann1.FW97GV Arachis hypogaea HOM05D002792 ORTHO05D003039 6.2e-10 67.8 41 75.6
arahy.Tifrunner.gnm1.ann1.GFJ9I4 Arachis hypogaea HOM05D002792 ORTHO05D003039 8.1e-10 67.4 39 76.9
EL10Ac2g04008 Beta vulgaris HOM05D002792 ORTHO05D003039 8.1e-10 67.4 42 73.8
Solyc08g066540.3 Solanum lycopersicum HOM05D002792 ORTHO05D003039 8.1e-10 67.4 72 51.4
Eucgr.C02937 Eucalyptus grandis HOM05D002792 ORTHO05D003039 1.4e-09 66.6 42 66.7
Sopen08g020380 Solanum pennellii HOM05D002792 ORTHO05D003039 1.8e-09 66.2 79 46.8
Gorai.009G049500 Gossypium raimondii HOM05D002792 ORTHO05D003039 2.4e-09 65.9 54 68.5
Nitab4.5_0003794g0060 Nicotiana tabacum HOM05D002792 ORTHO05D003039 2.4e-09 65.9 48 62.5
Psat5g021080 Pisum sativum HOM05D002792 ORTHO05D003039 4.0e-09 65.1 46 63.0
PGR031G0555 Punica granatum HOM05D002792 ORTHO05D003039 4.0e-09 65.1 54 59.3
THA.LOC104803806 Tarenaya hassleriana HOM05D002792 ORTHO05D003039 4.0e-09 65.1 54 61.1
PSO210G0529 Papaver somniferum HOM05D002792 ORTHO05D003039 3.4e-08 62.0 91 42.9
PSO210G7550 Papaver somniferum HOM05D002792 ORTHO05D003039 4.5e-08 61.6 91 42.9
AUR62042437 Chenopodium quinoa HOM05D002792 ORTHO05D003039 5.8e-08 61.2 45 64.4
AUR62009270 Chenopodium quinoa HOM05D002792 ORTHO05D003039 7.6e-08 60.8 45 64.4
Aqoxy7G03895 Aquilegia oxysepala HOM05D002792 ORTHO05D003039 1.3e-07 60.1 54 51.9
Glyma.14G143300 Glycine max HOM05D002792 ORTHO05D003039 1.7e-07 59.7 43 65.1
Migut.E01530 Erythranthe guttata HOM05D002792 ORTHO05D003039 6.4e-07 57.8 43 58.1
ECA246G3749 Erigeron canadensis HOM05D002792 ORTHO05D003039 1.9e-06 56.2 54 50.0
TWI34G0935 Tripterygium wilfordii HOM05D002792 ORTHO05D003039 1.9e-06 56.2 43 65.1
CDE05G0140 Ceratophyllum demersum HOM05D002792 ORTHO05D003039 2.4e-06 55.8 50 46.0
unitig_37.g12923 Utricularia gibba HOM05D002792 ORTHO05D003039 4.2e-06 55.1 72 47.2


User provided reference genes

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