Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0039750 Camellia sinensis var. sinensis HOM05D005503 ORTHO05D008949 9.3e-66 253.4 132 100.0
Rhsim03G0032200 Rhododendron simsii HOM05D005503 ORTHO05D008949 2.2e-43 179.1 120 78.3
vmacro21945 Vaccinium macrocarpon HOM05D005503 ORTHO05D008949 2.7e-41 172.2 121 74.4
Dinv39668 Davidia involucrata HOM05D005503 ORTHO05D008949 3.0e-40 168.7 127 71.7
Actinidia39197 Actinidia chinensis HOM05D005503 ORTHO05D008949 6.7e-40 167.5 120 75.0
TAR636G0173 Trochodendron aralioides HOM05D005503 ORTHO05D008949 4.3e-31 138.3 119 61.3
GSVIVG01005042001 Vitis vinifera HOM05D005503 ORTHO05D008949 3.7e-30 135.2 119 62.2
CiPaw.10G036000 Carya illinoinensis HOM05D005503 ORTHO05D008949 6.9e-29 131.0 93 69.9
Lj1g0008024 Lotus japonicus HOM05D005503 ORTHO05D008949 3.4e-28 128.6 94 70.2
Psat3g074800 Pisum sativum HOM05D005503 ORTHO05D008949 3.4e-28 128.6 93 69.9
Prupe.7G052400 Prunus persica HOM05D005503 ORTHO05D008949 4.5e-28 128.3 106 61.3
FvH4_6g24610 Fragaria vesca HOM05D005503 ORTHO05D008949 7.7e-28 127.5 71 85.9
FAN14G5504 Fragaria x ananassa HOM05D005503 ORTHO05D008949 7.7e-28 127.5 71 85.9
FAN02G3508 Fragaria x ananassa HOM05D005503 ORTHO05D008949 1.3e-27 126.7 92 72.8
QL07p004035 Quercus lobata HOM05D005503 ORTHO05D008949 1.7e-27 126.3 93 66.7
RcHm_v2.0_Chr3g0483941 Rosa chinensis HOM05D005503 ORTHO05D008949 2.2e-27 125.9 75 81.3
Glyma.03G133400 Glycine max HOM05D005503 ORTHO05D008949 2.9e-27 125.6 95 69.5
Glyma.19G135200 Glycine max HOM05D005503 ORTHO05D008949 2.9e-27 125.6 95 69.5
MBI13_g26145_MAGBIO Magnolia biondii HOM05D005503 ORTHO05D008949 2.9e-27 125.6 128 50.8
Medtr7g090930 Medicago truncatula HOM05D005503 ORTHO05D008949 2.9e-27 125.6 108 62.0
FAN05G5816 Fragaria x ananassa HOM05D005503 ORTHO05D008949 3.8e-27 125.2 71 84.5
Hma1.2p1_0110F.1_g052960 Hydrangea macrophylla HOM05D005503 ORTHO05D008949 8.5e-27 124.0 68 89.7
MD12G1083400 Malus domestica HOM05D005503 ORTHO05D008949 3.2e-26 122.1 97 63.9
Atru.chr1.1203 Acer truncatum HOM05D005503 ORTHO05D008949 4.2e-26 121.7 117 55.6
CANSAT80G2315 Cannabis sativa HOM05D005503 ORTHO05D008949 4.2e-26 121.7 116 60.3
FAN09G2222 Fragaria x ananassa HOM05D005503 ORTHO05D008949 4.2e-26 121.7 71 83.1
TPR.G7098 Trifolium pratense HOM05D005503 ORTHO05D008949 4.2e-26 121.7 89 69.7
Haze_19781 Corylus avellana HOM05D005503 ORTHO05D008949 5.5e-26 121.3 119 57.1
Potri.006G047800 Populus trichocarpa HOM05D005503 ORTHO05D008949 7.2e-26 120.9 109 59.6
Nn2g15105 Nelumbo nucifera HOM05D005503 ORTHO05D008949 9.4e-26 120.6 119 58.0
Phvul.001G128900 Phaseolus vulgaris HOM05D005503 ORTHO05D008949 1.2e-25 120.2 97 63.9
Aqoxy2G00233 Aquilegia oxysepala HOM05D005503 ORTHO05D008949 1.6e-25 119.8 83 72.3
Duzib093G0766 Durio zibethinus HOM05D005503 ORTHO05D008949 1.6e-25 119.8 117 54.7
VMungo1383G2568 Vigna mungo HOM05D005503 ORTHO05D008949 2.1e-25 119.4 102 61.8
Lalb_Chr20g0115621 Lupinus albus HOM05D005503 ORTHO05D008949 3.6e-25 118.6 73 78.1
Lsat_1_v5_gn_9_32141 Lactuca sativa HOM05D005503 ORTHO05D008949 4.7e-25 118.2 88 70.5
Lalb_Chr20g0110371 Lupinus albus HOM05D005503 ORTHO05D008949 4.7e-25 118.2 73 76.7
Sabra06G0033300 Salix brachista HOM05D005503 ORTHO05D008949 6.1e-25 117.9 117 57.3
arahy.Tifrunner.gnm1.ann1.Z9GIA8 Arachis hypogaea HOM05D005503 ORTHO05D008949 7.9e-25 117.5 122 54.9
Ciclev10006881m.g Citrus clementina HOM05D005503 ORTHO05D008949 1.8e-24 116.3 103 60.2
Ca_22958_v3 Cicer arietinum L. HOM05D005503 ORTHO05D008949 2.3e-24 115.9 88 67.0
ECA247G0412 Erigeron canadensis HOM05D005503 ORTHO05D008949 3.0e-24 115.5 115 54.8
MELO3C009814.2 Cucumis melo HOM05D005503 ORTHO05D008949 3.9e-24 115.2 117 53.8
Potri.016G044001 Populus trichocarpa HOM05D005503 ORTHO05D008949 5.1e-24 114.8 109 58.7
CsaV3_3G040800 Cucumis sativus L. HOM05D005503 ORTHO05D008949 6.7e-24 114.4 109 56.0
Nitab4.5_0001618g0220 Nicotiana tabacum HOM05D005503 ORTHO05D008949 6.7e-24 114.4 108 54.6
arahy.Tifrunner.gnm1.ann1.BJA8E7 Arachis hypogaea HOM05D005503 ORTHO05D008949 8.8e-24 114.0 95 64.2
Eucgr.A02305 Eucalyptus grandis HOM05D005503 ORTHO05D008949 8.8e-24 114.0 92 62.0
Nitab4.5_0000826g0100 Nicotiana tabacum HOM05D005503 ORTHO05D008949 8.8e-24 114.0 108 54.6
Sc13g0001540 Simmondsia chinensis HOM05D005503 ORTHO05D008949 8.8e-24 114.0 81 69.1
Dinv18679 Davidia involucrata HOM05D005503 ORTHO05D008949 1.1e-23 113.6 72 80.6
ClCG10G015610 Citrullus lanatus HOM05D005503 ORTHO05D008949 1.5e-23 113.2 86 65.1
Manes.09G011000 Manihot esculenta HOM05D005503 ORTHO05D008949 1.5e-23 113.2 125 53.6
Cpa.g.sc1079.1 Carica papaya HOM05D005503 ORTHO05D008949 2.6e-23 112.5 87 65.5
Gohir.A09G120500 Gossypium hirsutum HOM05D005503 ORTHO05D008949 2.6e-23 112.5 118 52.5
Gohir.D09G116600 Gossypium hirsutum HOM05D005503 ORTHO05D008949 3.3e-23 112.1 118 52.5
Gorai.006G134900 Gossypium raimondii HOM05D005503 ORTHO05D008949 3.3e-23 112.1 118 52.5
C09p72840 Brassica napus HOM05D005503 ORTHO05D008949 4.4e-23 111.7 91 64.8
BolC9t60020H Brassica oleracea HOM05D005503 ORTHO05D008949 4.4e-23 111.7 91 64.8
Cc06_g18190 Coffea canephora HOM05D005503 ORTHO05D008949 5.7e-23 111.3 120 50.8
Oeu006918.1 Olea europaea HOM05D005503 ORTHO05D008949 5.7e-23 111.3 120 52.5
TWI77G0247 Tripterygium wilfordii HOM05D005503 ORTHO05D008949 7.4e-23 110.9 73 72.6
COL.COLO4_36524 Corchorus olitorius HOM05D005503 ORTHO05D008949 1.7e-22 109.8 117 49.6
HanXRQChr10g0298211 Helianthus annuus HOM05D005503 ORTHO05D008949 1.7e-22 109.8 81 66.7
CARHR209280 Cardamine hirsuta HOM05D005503 ORTHO05D008949 2.8e-22 109.0 65 80.0
Oeu033023.1 Olea europaea HOM05D005503 ORTHO05D008949 2.8e-22 109.0 75 76.0
AT5G04000 Arabidopsis thaliana HOM05D005503 ORTHO05D008949 3.7e-22 108.6 65 80.0
AL6G13590 Arabidopsis lyrata HOM05D005503 ORTHO05D008949 4.8e-22 108.2 82 68.3
Thhalv10016002m.g Eutrema salsugineum HOM05D005503 ORTHO05D008949 6.3e-22 107.8 115 53.0
Thecc.05G146600 Theobroma cacao HOM05D005503 ORTHO05D008949 6.3e-22 107.8 81 63.0
ATR0721G098 Amborella trichopoda HOM05D005503 ORTHO05D008949 8.2e-22 107.5 64 79.7
DCAR_020514 Daucus carota HOM05D005503 ORTHO05D008949 8.2e-22 107.5 125 54.4
A10p32120 Brassica napus HOM05D005503 ORTHO05D008949 1.1e-21 107.1 91 62.6
BraA10t45255Z Brassica rapa HOM05D005503 ORTHO05D008949 1.1e-21 107.1 91 62.6
PGR004G2205 Punica granatum HOM05D005503 ORTHO05D008949 1.4e-21 106.7 88 61.4
Sed0013086 Sechium edule HOM05D005503 ORTHO05D008949 1.4e-21 106.7 79 67.1
Duzib128G0213 Durio zibethinus HOM05D005503 ORTHO05D008949 2.4e-21 105.9 73 63.0
Sp6g38760 Schrenkiella parvula HOM05D005503 ORTHO05D008949 2.4e-21 105.9 91 60.4
BcaC06g32102 Brassica carinata HOM05D005503 ORTHO05D008949 3.1e-21 105.5 83 67.5
Carub.0006s0293 Capsella rubella HOM05D005503 ORTHO05D008949 4.1e-21 105.1 65 78.5
Hund24647 Selenicereus undatus HOM05D005503 ORTHO05D008949 4.1e-21 105.1 79 67.1
Solyc04g016420.3 Solanum lycopersicum HOM05D005503 ORTHO05D008949 5.3e-21 104.8 104 53.8
Sopen04g008520 Solanum pennellii HOM05D005503 ORTHO05D008949 5.3e-21 104.8 104 53.8
Aa31LG1G21320 Aethionema arabicum HOM05D005503 ORTHO05D008949 6.9e-21 104.4 83 67.5
DCAR_013615 Daucus carota HOM05D005503 ORTHO05D008949 9.1e-21 104.0 83 65.1
Peaxi162Scf00130g00911 Petunia axillaris HOM05D005503 ORTHO05D008949 9.1e-21 104.0 86 59.3
Rhsim04G0037200 Rhododendron simsii HOM05D005503 ORTHO05D008949 9.1e-21 104.0 83 67.5
Rhsim04G0170300 Rhododendron simsii HOM05D005503 ORTHO05D008949 9.1e-21 104.0 83 67.5
PGSC0003DMG400012701 Solanum tuberosum HOM05D005503 ORTHO05D008949 1.5e-20 103.2 101 54.5
EL10Ac3g07150 Beta vulgaris HOM05D005503 ORTHO05D008949 7.7e-20 100.9 113 50.4
SGA_v2.0_scaffold69G23127 Striga asiatica HOM05D005503 ORTHO05D008949 1.0e-19 100.5 73 72.6
CDE09G0956 Ceratophyllum demersum HOM05D003424 ORTHO05D004025 1.3e-19 100.1 97 55.7
AUR62024521 Chenopodium quinoa HOM05D005503 ORTHO05D008949 1.3e-19 100.1 102 52.9
Migut.J01714 Erythranthe guttata HOM05D005503 ORTHO05D008949 1.3e-19 100.1 85 62.4
Ah.13g077080 Amaranthus hybridus HOM05D005503 ORTHO05D008949 2.2e-19 99.4 95 58.9
CAN.G1237.11 Capsicum annuum HOM05D005503 ORTHO05D008949 3.8e-19 98.6 101 51.5
THA.LOC104816402 Tarenaya hassleriana HOM05D005503 ORTHO05D008949 3.8e-19 98.6 91 59.3
Os05g0496000 Oryza sativa ssp. japonica HOM05D005503 ORTHO05D008949 1.4e-18 96.7 64 71.9
HPP92_027974 Vanilla planifolia HOM05D005503 ORTHO05D008949 1.9e-18 96.3 65 69.2
Hma1.2p1_0005F.1_g004410 Hydrangea macrophylla HOM05D005503 ORTHO05D008949 9.4e-18 94.0 70 71.4
SalBow6G3706 Salvia bowleyana HOM05D005503 ORTHO05D008949 2.7e-17 92.4 65 70.8
SalBow6G4155 Salvia bowleyana HOM05D005503 ORTHO05D008949 2.7e-17 92.4 65 70.8
Ah.04g151390 Amaranthus hybridus HOM05D005503 ORTHO05D008949 4.7e-17 91.7 59 74.6
unitig_22.g6053 Utricularia gibba HOM05D005503 ORTHO05D008949 4.7e-17 91.7 80 58.8
Zm00001eb291660 Zea mays HOM05D005503 ORTHO05D008949 3.0e-16 89.0 66 66.7
PSO063G5603 Papaver somniferum HOM05D005503 ORTHO05D008949 6.7e-16 87.8 86 57.0
vmacro21963 Vaccinium macrocarpon HOM05D005503 ORTHO05D008949 1.1e-15 87.0 74 68.9
Mapoly0048s0063 Marchantia polymorpha HOM05D005503 ORTHO05D008949 5.7e-15 84.7 138 38.4
HPP92_018218 Vanilla planifolia HOM05D005503 ORTHO05D008949 5.3e-13 78.2 56 64.3


User provided reference genes

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