Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0039739 Camellia sinensis var. sinensis HOM05D005571 ORTHO05D006919 8.3e-103 377.1 198 100.0
CSS0029462 Camellia sinensis var. sinensis HOM05D005571 ORTHO05D006919 1.9e-83 312.8 210 84.8
CSS0038566 Camellia sinensis var. sinensis HOM05D005571 ORTHO05D006919 1.4e-73 280.0 198 80.8
Actinidia15492 Actinidia chinensis HOM05D005571 ORTHO05D006919 5.1e-52 208.4 212 60.8
Actinidia17042 Actinidia chinensis HOM05D005571 ORTHO05D006919 3.1e-49 199.1 212 59.9
Rhsim06G0007100 Rhododendron simsii HOM05D005571 ORTHO05D006919 1.0e-47 194.1 210 56.7
CSS0030992 Camellia sinensis var. sinensis HOM05D005571 ORTHO05D006919 4.2e-46 188.7 208 60.1
vmacro21809 Vaccinium macrocarpon HOM05D005571 ORTHO05D006919 9.4e-46 187.6 214 55.6
GSVIVG01008671001 Vitis vinifera HOM05D005571 ORTHO05D006919 7.4e-43 177.9 206 53.9
Potri.005G250800 Populus trichocarpa HOM05D005571 ORTHO05D006919 4.8e-42 175.3 211 54.0
Sabra05G0194000 Salix brachista HOM05D005571 ORTHO05D006919 3.1e-41 172.6 213 53.1
Nitab4.5_0000588g0080 Nicotiana tabacum HOM05D005571 ORTHO05D006919 1.0e-39 167.5 213 53.1
Hma1.2p1_0157F.1_g069390 Hydrangea macrophylla HOM05D005571 ORTHO05D006919 4.2e-38 162.2 213 53.1
Haze_22782 Corylus avellana HOM05D005571 ORTHO05D006919 1.2e-37 160.6 214 49.5
Thecc.08G059400 Theobroma cacao HOM05D005571 ORTHO05D006919 2.7e-37 159.5 210 51.4
CAN.G311.116 Capsicum annuum HOM05D005571 ORTHO05D006919 6.1e-37 158.3 215 52.1
COL.COLO4_05218 Corchorus olitorius HOM05D005571 ORTHO05D006919 7.9e-37 157.9 213 52.1
Duzib116G0932 Durio zibethinus HOM05D005571 ORTHO05D006919 7.9e-37 157.9 212 51.4
Sabra02G0007800 Salix brachista HOM05D005571 ORTHO05D006919 7.9e-37 157.9 210 51.4
Potri.002G010400 Populus trichocarpa HOM05D005571 ORTHO05D006919 1.0e-36 157.5 211 50.7
Cfa014080 Carpinus fangiana HOM05D005571 ORTHO05D006919 3.0e-36 156.0 213 48.8
TAR628G0603 Trochodendron aralioides HOM05D005571 ORTHO05D006919 8.8e-36 154.5 217 49.8
CiPaw.08G073400 Carya illinoinensis HOM05D005571 ORTHO05D006919 1.1e-35 154.1 210 49.0
Manes.05G133900 Manihot esculenta HOM05D005571 ORTHO05D006919 2.0e-35 153.3 209 50.2
Dinv05532 Davidia involucrata HOM05D005571 ORTHO05D006919 2.6e-35 152.9 209 53.1
Peaxi162Scf00893g00005 Petunia axillaris HOM05D005571 ORTHO05D006919 3.3e-35 152.5 211 49.8
CiPaw.07G138600 Carya illinoinensis HOM05D005571 ORTHO05D006919 9.7e-35 151.0 214 49.5
Manes.18G005301 Manihot esculenta HOM05D005571 ORTHO05D006919 9.7e-35 151.0 210 48.6
Duzib093G0863 Durio zibethinus HOM05D005571 ORTHO05D006919 2.8e-34 149.4 210 49.0
Sopen04g035980 Solanum pennellii HOM05D005571 ORTHO05D006919 3.7e-34 149.1 213 51.2
PGSC0003DMG400009903 Solanum tuberosum HOM05D005571 ORTHO05D006919 8.2e-34 147.9 213 51.2
Lj4A11T70 Lonicera japonica HOM05D005571 ORTHO05D006919 1.8e-33 146.7 215 50.7
PGR083G0609 Punica granatum HOM05D005571 ORTHO05D006919 2.4e-33 146.4 214 49.5
MELO3C026535.2 Cucumis melo HOM05D005571 ORTHO05D006919 7.0e-33 144.8 211 49.3
Oeu064631.1 Olea europaea HOM05D005571 ORTHO05D006919 1.2e-32 144.1 211 47.9
QL02p014184 Quercus lobata HOM05D005571 ORTHO05D006919 1.2e-32 144.1 216 46.8
Ciclev10002509m.g Citrus clementina HOM05D005571 ORTHO05D006919 1.6e-32 143.7 210 47.6
TWI56G1114 Tripterygium wilfordii HOM05D005571 ORTHO05D006919 2.6e-32 142.9 212 48.6
Gohir.A05G179400 Gossypium hirsutum HOM05D005571 ORTHO05D006919 4.5e-32 142.1 218 49.1
Gohir.D05G182600 Gossypium hirsutum HOM05D005571 ORTHO05D006919 7.7e-32 141.4 216 48.1
Gorai.009G187900 Gossypium raimondii HOM05D005571 ORTHO05D006919 7.7e-32 141.4 216 48.1
ClCG08G009410 Citrullus lanatus HOM05D005571 ORTHO05D006919 3.8e-31 139.0 209 47.4
Cc10_g00650 Coffea canephora HOM05D005571 ORTHO05D006919 6.5e-31 138.3 214 47.7
Lj1g0015612 Lotus japonicus HOM05D005571 ORTHO05D006919 1.1e-30 137.5 211 45.0
TWI12G0392 Tripterygium wilfordii HOM05D005571 ORTHO05D006919 5.5e-30 135.2 211 46.0
CsaV3_6G031520 Cucumis sativus L. HOM05D005571 ORTHO05D006919 7.2e-30 134.8 209 45.0
Aqoxy6G01708 Aquilegia oxysepala HOM05D005571 ORTHO05D006919 9.4e-30 134.4 214 47.2
DCAR_009532 Daucus carota HOM05D005571 ORTHO05D006919 9.4e-30 134.4 212 47.2
Sed0002015 Sechium edule HOM05D005571 ORTHO05D006919 9.4e-30 134.4 213 46.5
Glyma.06G018100 Glycine max HOM05D005571 ORTHO05D006919 1.6e-29 133.7 203 46.8
MSTRG.24929 Avicennia marina HOM05D005571 ORTHO05D006919 8.0e-29 131.3 217 45.6
FvH4_2g37430 Fragaria vesca HOM05D005571 ORTHO05D006919 8.0e-29 131.3 218 45.9
Oeu035840.1 Olea europaea HOM05D005571 ORTHO05D006919 1.0e-28 131.0 211 46.0
VMungo1309G0957 Vigna mungo HOM05D005571 ORTHO05D006919 3.0e-28 129.4 195 45.6
Migut.C00385 Erythranthe guttata HOM05D005571 ORTHO05D006919 6.7e-28 128.3 221 46.2
Phvul.009G010900 Phaseolus vulgaris HOM05D005571 ORTHO05D006919 2.0e-27 126.7 196 45.9
Dinv31944 Davidia involucrata HOM05D005571 ORTHO05D006919 4.4e-27 125.6 217 47.9
FAN15G1374 Fragaria x ananassa HOM05D005571 ORTHO05D006919 9.7e-27 124.4 212 46.7
Glyma.04G017800 Glycine max HOM05D005571 ORTHO05D006919 9.7e-27 124.4 202 45.0
RcHm_v2.0_Chr6g0304291 Rosa chinensis HOM05D005571 ORTHO05D006919 2.2e-26 123.2 212 45.3
Oeu000692.1 Olea europaea HOM05D005571 ORTHO05D006919 6.3e-26 121.7 217 44.2
FAN27G2782 Fragaria x ananassa HOM05D005571 ORTHO05D006919 8.2e-26 121.3 216 44.9
Gorai.005G113600 Gossypium raimondii HOM05D005571 ORTHO05D006919 8.2e-26 121.3 196 48.0
MSTRG.977 Avicennia marina HOM05D005571 ORTHO05D006919 1.4e-25 120.6 203 43.3
Nn6g31737 Nelumbo nucifera HOM05D005571 ORTHO05D006919 3.1e-25 119.4 211 45.0
FAN20G2818 Fragaria x ananassa HOM05D005571 ORTHO05D006919 4.1e-25 119.0 216 44.0
Lsat_1_v5_gn_2_4041 Lactuca sativa HOM05D005571 ORTHO05D006919 4.1e-25 119.0 204 46.1
Gohir.D02G100200 Gossypium hirsutum HOM05D005571 ORTHO05D006919 5.3e-25 118.6 196 47.4
SGA_v2.0_scaffold133G34635 Striga asiatica HOM05D005571 ORTHO05D006919 5.3e-25 118.6 221 44.3
EL10Ac1g01953 Beta vulgaris HOM05D005571 ORTHO05D006919 7.0e-25 118.2 185 47.0
SalBow7G0698 Salvia bowleyana HOM05D005571 ORTHO05D006919 9.1e-25 117.9 223 43.9
Sc02g0009100 Simmondsia chinensis HOM05D005571 ORTHO05D006919 9.1e-25 117.9 197 42.6
Hund01764 Selenicereus undatus HOM05D005571 ORTHO05D006919 2.7e-24 116.3 205 44.4
Cfa012650 Carpinus fangiana HOM05D005571 ORTHO05D006919 3.5e-24 115.9 188 44.7
AUR62040795 Chenopodium quinoa HOM05D005571 ORTHO05D006919 4.5e-24 115.5 188 43.6
HanXRQChr14g0428071 Helianthus annuus HOM05D005571 ORTHO05D006919 1.0e-23 114.4 216 42.1
SalBow5G5667 Salvia bowleyana HOM05D005571 ORTHO05D006919 2.2e-23 113.2 197 45.2
Ah.11g041150 Amaranthus hybridus HOM05D005571 ORTHO05D006919 2.9e-23 112.8 196 39.3
Lalb_Chr23g0265781 Lupinus albus HOM05D005571 ORTHO05D006919 3.8e-23 112.5 212 43.9
Carub.0008s0685 Capsella rubella HOM05D005571 ORTHO05D006919 1.1e-22 110.9 196 42.3
HanXRQChr06g0183961 Helianthus annuus HOM05D005571 ORTHO05D006919 1.1e-22 110.9 189 46.6
AL8G19260 Arabidopsis lyrata HOM05D005571 ORTHO05D006919 2.5e-22 109.8 199 42.7
CANSAT25G0564 Cannabis sativa HOM05D005571 ORTHO05D006919 4.2e-22 109.0 207 41.1
THA.LOC104813174 Tarenaya hassleriana HOM05D005571 ORTHO05D006919 5.5e-22 108.6 208 41.8
Medtr3g115300 Medicago truncatula HOM05D005571 ORTHO05D006919 7.2e-22 108.2 215 41.9
AT5G42330 Arabidopsis thaliana HOM05D005571 ORTHO05D006919 1.2e-21 107.5 197 41.6
THA.LOC104825425 Tarenaya hassleriana HOM05D005571 ORTHO05D006919 3.6e-21 105.9 199 42.2
arahy.Tifrunner.gnm1.ann1.G9B5FS Arachis hypogaea HOM05D005571 ORTHO05D006919 4.7e-21 105.5 222 40.1
Atru.chr13.137 Acer truncatum HOM05D005571 ORTHO05D006919 1.4e-20 104.0 149 49.7
unitig_747.g21542 Utricularia gibba HOM05D005571 ORTHO05D006919 2.3e-20 103.2 216 41.7
arahy.Tifrunner.gnm1.ann1.VC4QUA Arachis hypogaea HOM05D005571 ORTHO05D006919 3.0e-20 102.8 218 40.4
TPR.G38112 Trifolium pratense HOM05D005571 ORTHO05D006919 3.0e-20 102.8 213 40.4
CARHR284960 Cardamine hirsuta HOM05D005571 ORTHO05D006919 2.0e-19 100.1 202 42.1
unitig_0.g2084 Utricularia gibba HOM05D005571 ORTHO05D006919 2.0e-19 100.1 164 43.9
Psat0s2670g0120 Pisum sativum HOM05D005571 ORTHO05D006919 5.7e-19 98.6 169 42.0
Hund05103 Selenicereus undatus HOM05D001348 ORTHO05D002788 7.5e-19 98.2 185 43.2
ECA238G3324 Erigeron canadensis HOM05D005571 ORTHO05D007881 2.2e-18 96.7 170 43.5
BcaB01g04868 Brassica carinata HOM05D005571 ORTHO05D006919 3.7e-18 95.9 198 38.9
Sp6g25100 Schrenkiella parvula HOM05D005571 ORTHO05D006919 1.1e-17 94.4 199 41.2
BcaB01g05139 Brassica carinata HOM05D005571 ORTHO05D006919 1.4e-17 94.0 194 40.7
A03p09420 Brassica napus HOM05D005571 ORTHO05D006919 1.8e-17 93.6 197 40.1
BraA03t10260Z Brassica rapa HOM05D005571 ORTHO05D006919 1.8e-17 93.6 197 40.1
Aa31LG9G12460 Aethionema arabicum HOM05D005571 ORTHO05D006919 2.4e-17 93.2 208 38.5
BolC3t13569H Brassica oleracea HOM05D005571 ORTHO05D006919 2.4e-17 93.2 197 40.1
Prupe.1G354300 Prunus persica HOM05D005571 ORTHO05D006919 2.4e-17 93.2 266 36.1
C03p11000 Brassica napus HOM05D005571 ORTHO05D006919 3.1e-17 92.8 194 40.2
Thhalv10014687m.g Eutrema salsugineum HOM05D005571 ORTHO05D006919 3.1e-17 92.8 204 41.2
PSO675G2006 Papaver somniferum HOM05D005571 ORTHO05D006919 7.0e-17 91.7 213 38.0
PSO541G4697 Papaver somniferum HOM05D005571 ORTHO05D006919 3.5e-16 89.4 211 37.4
MBI05_g43168_MAGBIO Magnolia biondii HOM05D005571 ORTHO05D006919 1.0e-15 87.8 206 40.3
Sabra11G0114300 Salix brachista HOM05D005571 ORTHO05D006919 2.2e-15 86.7 124 50.8
Ca_15432_v3 Cicer arietinum L. HOM05D005571 ORTHO05D006919 1.1e-14 84.3 161 42.9
Ca_15457_v3 Cicer arietinum L. HOM05D005571 ORTHO05D006919 1.1e-14 84.3 161 42.9
BcaB08g36584 Brassica carinata HOM05D005571 ORTHO05D006919 9.4e-14 81.3 202 39.1
CDE05G1909 Ceratophyllum demersum HOM05D005571 ORTHO05D006919 1.0e-12 77.8 179 39.7
Sc15g0004410 Simmondsia chinensis HOM05D005571 ORTHO05D006919 1.0e-12 77.8 141 42.6
AUR62036861 Chenopodium quinoa HOM05D005571 ORTHO05D006919 1.3e-10 70.9 188 33.5
SHI42933 Sapria himalayana HOM05D005571 ORTHO05D006919 2.8e-10 69.7 179 34.6
CDE04G0695 Ceratophyllum demersum HOM05D005571 ORTHO05D006919 1.6e-08 63.9 172 36.0
BcaC04g18579 Brassica carinata HOM05D005571 ORTHO05D006919 5.9e-08 62.0 165 36.4
A02p05480 Brassica napus HOM05D005571 ORTHO05D006919 5.9e-08 62.0 114 42.1
C09p56960 Brassica napus HOM05D005571 ORTHO05D006919 5.9e-08 62.0 165 36.4
BolC9t58559H Brassica oleracea HOM05D005571 ORTHO05D006919 5.9e-08 62.0 165 36.4
BraA02t05499Z Brassica rapa HOM05D005571 ORTHO05D006919 5.9e-08 62.0 114 42.1
BcaC03g13663 Brassica carinata HOM05D005571 ORTHO05D006919 7.7e-08 61.6 114 42.1
BNapus_Darmor_BZH_scaffold_38p02630 Brassica napus HOM05D005571 ORTHO05D006919 7.7e-08 61.6 114 42.1
A10p20370 Brassica napus HOM05D005571 ORTHO05D006919 1.3e-07 60.8 178 33.7
Cpa.g.c36471 Carica papaya HOM05D005571 ORTHO05D006919 1.7e-07 60.5 78 48.7
Solyc04g082380.4 Solanum lycopersicum HOM05D005571 ORTHO05D006919 6.6e-07 58.5 103 42.7
ECA238G3056 Erigeron canadensis HOM05D002204 ORTHO05D002875 1.9e-06 57.0 105 41.0
BraA10t44107Z Brassica rapa HOM05D005571 ORTHO05D006919 7.3e-06 55.1 185 33.5


User provided reference genes

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