Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0039716 Camellia sinensis var. sinensis HOM05D010934 ORTHO05D000669 1.9e-119 432.6 229 100.0
CSS0005105 Camellia sinensis var. sinensis HOM05D010934 ORTHO05D000669 4.8e-118 427.9 229 99.1
CSS0037888 Camellia sinensis var. sinensis HOM05D010934 ORTHO05D000669 4.8e-118 427.9 229 99.1
CSS0026970 Camellia sinensis var. sinensis HOM05D010934 ORTHO05D000669 4.9e-115 417.9 229 96.9
CSS0007712 Camellia sinensis var. sinensis HOM05D010934 ORTHO05D000669 9.4e-58 227.6 215 57.7
CSS0042483 Camellia sinensis var. sinensis HOM05D010934 ORTHO05D000669 9.4e-58 227.6 215 57.7
CSS0000180 Camellia sinensis var. sinensis HOM05D010934 ORTHO05D000669 1.4e-56 223.8 214 57.5
CSS0026212 Camellia sinensis var. sinensis HOM05D010934 ORTHO05D000669 6.6e-51 204.9 149 64.4
CSS0009810 Camellia sinensis var. sinensis HOM05D010934 ORTHO05D000669 8.6e-51 204.5 149 63.8
CSS0013208 Camellia sinensis var. sinensis HOM05D010934 ORTHO05D000669 1.2e-36 157.5 126 61.1
FvH4_3g22812 Fragaria vesca HOM05D023520 ORTHO05D025365 1.1e-16 91.3 141 29.1
MBI02_g29975_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 1.1e-16 91.3 173 28.9
PGR004G1992 Punica granatum HOM05D000791 ORTHO05D000669 1.1e-16 91.3 224 29.9
RcHm_v2.0_Chr4g0402051 Rosa chinensis HOM05D000791 ORTHO05D000669 3.1e-16 89.7 144 33.3
MBI16_g34343_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 4.0e-16 89.4 173 30.6
Rhsim03G0202300 Rhododendron simsii HOM05D017301 ORTHO05D000669 2.0e-15 87.0 176 27.3
Rhsim09G0047300 Rhododendron simsii HOM05D000107 ORTHO05D000062 1.3e-14 84.3 149 29.5
FAN10G2090 Fragaria x ananassa HOM05D008705 ORTHO05D000669 3.8e-14 82.8 148 29.7
FAN10G3855 Fragaria x ananassa HOM05D008705 ORTHO05D000669 3.8e-14 82.8 148 29.7
MBI19_g01025_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 4.9e-14 82.4 184 28.3
MBI12_g43234_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 2.4e-13 80.1 167 27.5
MBI09_g39165_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 1.2e-12 77.8 148 31.8
PSO384G0881 Papaver somniferum HOM05D017761 ORTHO05D000669 1.2e-12 77.8 153 32.0
MBI07_g22513_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 1.6e-12 77.4 173 27.2
PGSC0003DMG400001138 Solanum tuberosum HOM05D008892 ORTHO05D010661 1.6e-12 77.4 157 33.1
vmacro01281 Vaccinium macrocarpon HOM05D017301 ORTHO05D000669 2.7e-12 76.6 104 34.6
MBI18_g01981_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 4.6e-12 75.9 150 27.3
MBI19_g27593_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 4.6e-12 75.9 153 28.1
TPR.G36323 Trifolium pratense HOM05D008291 ORTHO05D003568 6.0e-12 75.5 111 29.7
PSO210G0630 Papaver somniferum HOM05D030578 ORTHO05D000669 7.8e-12 75.1 154 26.6
RcHm_v2.0_Chr4g0385011 Rosa chinensis HOM05D008705 ORTHO05D000669 1.7e-11 73.9 171 25.7
FAN09G3738 Fragaria x ananassa HOM05D008705 ORTHO05D001863 5.1e-11 72.4 132 29.5
FAN20G1055 Fragaria x ananassa HOM05D008705 ORTHO05D001863 6.6e-11 72.0 147 29.3
Dinv12412 Davidia involucrata HOM05D010418 ORTHO05D000669 8.7e-11 71.6 148 27.0
Dinv16095 Davidia involucrata HOM05D000791 ORTHO05D000669 1.9e-10 70.5 179 25.1
Dinv24767 Davidia involucrata HOM05D000791 ORTHO05D000669 1.9e-10 70.5 177 26.6
Dinv31455 Davidia involucrata HOM05D000791 ORTHO05D000669 1.9e-10 70.5 177 26.6
PGR044G2317 Punica granatum HOM05D001309 ORTHO05D000385 1.9e-10 70.5 139 33.8
Dinv01181 Davidia involucrata HOM05D000791 ORTHO05D000669 3.3e-10 69.7 150 26.0
Sopen09g001250 Solanum pennellii HOM05D008291 ORTHO05D000669 3.3e-10 69.7 178 25.3
MBI08_g02035_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 4.3e-10 69.3 180 27.2
TWI38G2136 Tripterygium wilfordii HOM05D003120 ORTHO05D000669 4.3e-10 69.3 145 31.7
MBI08_g19110_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 1.6e-09 67.4 114 26.3
QL93p0093_0054 Quercus lobata HOM05D003120 ORTHO05D003568 2.1e-09 67.0 162 26.5
Rhsim01G0156700 Rhododendron simsii HOM05D007798 ORTHO05D009882 2.8e-09 66.6 163 29.4
MBI01_g39588_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 3.6e-09 66.2 211 24.6
CANSAT21G2267 Cannabis sativa HOM05D009677 ORTHO05D011883 1.4e-08 64.3 158 22.8
FAN17G1365 Fragaria x ananassa HOM05D008705 ORTHO05D000669 2.4e-08 63.5 151 26.5
TPR.G6754 Trifolium pratense HOM05D008291 ORTHO05D003568 9.0e-08 61.6 154 23.4
Ca_17856_v3 Cicer arietinum L. HOM05D008291 ORTHO05D003568 1.2e-07 61.2 150 22.7
Migut.I00328 Erythranthe guttata HOM05D023261 ORTHO05D000222 1.5e-07 60.8 159 26.4
Sopen09g022380 Solanum pennellii HOM05D008291 ORTHO05D000669 2.0e-07 60.5 149 24.8
PSO063G4330 Papaver somniferum HOM05D017761 ORTHO05D000669 2.6e-07 60.1 121 28.9
PSO063G5169 Papaver somniferum HOM05D017761 ORTHO05D000669 2.6e-07 60.1 121 28.9
RcHm_v2.0_Chr3g0476041 Rosa chinensis HOM05D008705 ORTHO05D000669 2.6e-07 60.1 76 36.8
Rhsim06G0076200 Rhododendron simsii HOM05D000107 ORTHO05D009882 3.4e-07 59.7 176 28.4
Lsat_1_v5_gn_9_92641 Lactuca sativa HOM05D000708 ORTHO05D010402 4.4e-07 59.3 166 28.3
MBI13_g41510_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 5.8e-07 58.9 115 22.6
Rhsim11G0057000 Rhododendron simsii HOM05D007798 ORTHO05D009882 7.6e-07 58.5 157 26.1
Dinv11320 Davidia involucrata HOM05D000791 ORTHO05D000669 9.9e-07 58.2 171 25.1
FvH4_7g09790 Fragaria vesca HOM05D009879 ORTHO05D009647 9.9e-07 58.2 144 32.6
FAN03G0178 Fragaria x ananassa HOM05D009879 ORTHO05D009647 9.9e-07 58.2 144 32.6
FAN06G1112 Fragaria x ananassa HOM05D009879 ORTHO05D009647 1.3e-06 57.8 148 31.8
RcHm_v2.0_Chr2g0106131 Rosa chinensis HOM05D008705 ORTHO05D000669 1.7e-06 57.4 106 30.2
MBI19_g26810_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 2.2e-06 57.0 169 26.0
Rhsim02G0136200 Rhododendron simsii HOM05D017301 ORTHO05D000669 2.2e-06 57.0 96 29.2
RcHm_v2.0_Chr2g0102381 Rosa chinensis HOM05D008705 ORTHO05D000669 2.2e-06 57.0 73 35.6
RcHm_v2.0_Chr7g0214031 Rosa chinensis HOM05D008705 ORTHO05D000669 2.9e-06 56.6 107 26.2
Dinv25294 Davidia involucrata HOM05D010418 ORTHO05D000669 3.8e-06 56.2 115 24.3
RcHm_v2.0_Chr1g0381191 Rosa chinensis HOM05D008705 ORTHO05D000669 4.9e-06 55.8 107 26.2
RcHm_v2.0_Chr1g0346841 Rosa chinensis HOM05D009879 ORTHO05D009647 8.4e-06 55.1 157 29.9


User provided reference genes

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