Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0039702 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.4e-81 306.2 154 100.0
CSS0046748 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 5.4e-49 198.0 203 56.7
CSS0034941 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.0e-35 152.9 170 54.7
CSS0045870 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.9e-34 149.1 169 54.4
CSS0025416 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 3.3e-30 135.6 217 42.4
Rhsim02G0101600 Rhododendron simsii HOM05D000002 ORTHO05D000001 2.8e-29 132.5 207 41.1
CSS0007773 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 8.1e-29 131.0 166 48.8
CSS0016107 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.1e-28 130.6 148 53.4
CSS0050038 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.2e-24 117.1 169 47.3
CSS0003386 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.6e-24 116.7 175 42.9
Rhsim04G0108900 Rhododendron simsii HOM05D000002 ORTHO05D000001 3.6e-21 105.5 156 41.7
Rhsim05G0062600 Rhododendron simsii HOM05D000002 ORTHO05D000001 1.1e-20 104.0 160 40.6
Lju225C4G4 Lonicera japonica HOM05D000002 ORTHO05D000001 1.2e-19 100.5 159 42.1
Rhsim09G0019300 Rhododendron simsii HOM05D000002 ORTHO05D000001 2.6e-19 99.4 154 41.6
CSS0049708 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.2e-18 96.3 120 47.5
Lju225C0G8 Lonicera japonica HOM05D000002 ORTHO05D000001 1.6e-16 90.1 110 44.5
CSS0029429 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 4.3e-14 82.0 94 46.8
CAN.G447.8 Capsicum annuum HOM05D000002 ORTHO05D000001 5.6e-14 81.6 94 52.1
CSS0021158 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 7.3e-14 81.3 103 45.6
MSTRG.19383 Avicennia marina HOM05D000073 ORTHO05D000033 6.2e-13 78.2 109 43.1
RcHm_v2.0_Chr7g0190501 Rosa chinensis HOM05D000002 ORTHO05D000001 2.4e-12 76.3 157 35.7
Rhsim06G0125700 Rhododendron simsii HOM05D000002 ORTHO05D000001 4.0e-12 75.5 134 37.3
Prupe.4G199600 Prunus persica HOM05D000002 ORTHO05D000001 1.5e-11 73.6 108 37.0
CSS0014430 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.0e-11 73.2 99 41.4
Migut.F01590 Erythranthe guttata HOM05D000002 ORTHO05D000001 1.4e-09 67.0 120 31.7
Migut.H01198 Erythranthe guttata HOM05D000002 ORTHO05D000001 1.4e-09 67.0 120 31.7
Aqoxy5G02395 Aquilegia oxysepala HOM05D000002 ORTHO05D000001 4.2e-09 65.5 113 35.4
Migut.K01257 Erythranthe guttata HOM05D000002 ORTHO05D000001 4.2e-09 65.5 180 28.9
MD00G1084700 Malus domestica HOM05D000002 ORTHO05D000001 5.5e-09 65.1 210 28.1
SGA_v2.0_scaffold31G12742 Striga asiatica HOM05D000073 ORTHO05D000033 2.7e-08 62.8 113 35.4
RcHm_v2.0_Chr2g0129181 Rosa chinensis HOM05D000002 ORTHO05D000001 3.5e-08 62.4 194 28.9
TAR301G0003 Trochodendron aralioides HOM05D000002 ORTHO05D000001 3.5e-08 62.4 124 29.0
PSO541G1536 Papaver somniferum HOM05D000002 ORTHO05D000001 4.6e-08 62.0 113 31.9
RcHm_v2.0_Chr3g0465981 Rosa chinensis HOM05D000002 ORTHO05D000001 6.0e-08 61.6 196 27.6
CSS0020834 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.3e-07 60.5 181 29.3
Migut.D01554 Erythranthe guttata HOM05D000002 ORTHO05D000001 1.3e-07 60.5 125 32.0
CSS0043017 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.8e-07 60.1 100 36.0
TAR099G0005 Trochodendron aralioides HOM05D000002 ORTHO05D000001 1.8e-07 60.1 213 24.4
Actinidia07495 Actinidia chinensis HOM05D000002 ORTHO05D000001 3.0e-07 59.3 171 28.7
MD12G1020900 Malus domestica HOM05D000103 ORTHO05D000001 3.0e-07 59.3 115 34.8
Atru.chr2.2580 Acer truncatum HOM05D000002 ORTHO05D000001 3.9e-07 58.9 120 32.5
ECA233G5539 Erigeron canadensis HOM05D000002 ORTHO05D000001 5.1e-07 58.5 105 33.3
Sabra18G0120700 Salix brachista HOM05D000002 ORTHO05D000001 5.1e-07 58.5 202 27.2
ECA234G1407 Erigeron canadensis HOM05D000002 ORTHO05D000001 6.7e-07 58.2 105 33.3
FvH4_4g05782 Fragaria vesca HOM05D000002 ORTHO05D000001 1.9e-06 56.6 140 30.7
PSO754G0020 Papaver somniferum HOM05D000002 ORTHO05D000001 1.9e-06 56.6 113 29.2
Rhsim03G0160800 Rhododendron simsii HOM05D029833 ORTHO05D000001 1.9e-06 56.6 154 28.6
Sabra15G0028100 Salix brachista HOM05D000002 ORTHO05D000001 2.5e-06 56.2 198 27.3
Sopen11g003490 Solanum pennellii HOM05D000002 ORTHO05D000001 2.5e-06 56.2 188 25.0
MD12G1231800 Malus domestica HOM05D000002 ORTHO05D000001 3.3e-06 55.8 113 29.2
Rhsim02G0160900 Rhododendron simsii HOM05D000002 ORTHO05D000001 3.3e-06 55.8 161 25.5
Sopen05g011750 Solanum pennellii HOM05D000002 ORTHO05D000001 3.3e-06 55.8 196 24.5
Migut.E01660 Erythranthe guttata HOM05D000002 ORTHO05D000001 4.3e-06 55.5 200 27.0
FvH4_4g05872 Fragaria vesca HOM05D000002 ORTHO05D000001 4.3e-06 55.5 114 30.7
ECA238G2091 Erigeron canadensis HOM05D000002 ORTHO05D000001 5.6e-06 55.1 105 32.4
Migut.G00019 Erythranthe guttata HOM05D000002 ORTHO05D000001 5.6e-06 55.1 120 32.5
MD17G1115400 Malus domestica HOM05D000002 ORTHO05D000001 5.6e-06 55.1 115 27.8
Migut.E01000 Erythranthe guttata HOM05D000002 ORTHO05D000001 7.4e-06 54.7 168 27.4
Migut.G01154 Erythranthe guttata HOM05D000002 ORTHO05D000001 7.4e-06 54.7 135 28.9
MD14G1225200 Malus domestica HOM05D000002 ORTHO05D000001 7.4e-06 54.7 128 26.6
Hma1.2p1_0462F.1_g158010 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 9.6e-06 54.3 114 28.9
Psat7g220520 Pisum sativum HOM05D000002 ORTHO05D000001 9.6e-06 54.3 120 28.3
Sopen11g022270 Solanum pennellii HOM05D000002 ORTHO05D000001 9.6e-06 54.3 125 25.6


User provided reference genes

Program Settings