Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0039690 Camellia sinensis var. sinensis HOM05D002525 ORTHO05D002727 4.5e-70 267.7 126 100.0
CSS0033500 Camellia sinensis var. sinensis HOM05D002525 ORTHO05D002727 1.0e-66 256.5 120 99.2
Dinv22676 Davidia involucrata HOM05D002525 ORTHO05D002727 2.3e-50 202.2 120 80.0
Hma1.2p1_0597F.1_g186370 Hydrangea macrophylla HOM05D002525 ORTHO05D002727 4.4e-49 198.0 120 75.8
GSVIVG01013557001 Vitis vinifera HOM05D002525 ORTHO05D002727 1.4e-47 193.0 120 73.3
Actinidia35898 Actinidia chinensis HOM05D002525 ORTHO05D002727 5.0e-45 184.5 120 70.0
Sabra02G0175900 Salix brachista HOM05D002525 ORTHO05D002727 7.3e-44 180.6 120 67.5
Prupe.1G185800 Prunus persica HOM05D002525 ORTHO05D002727 2.1e-43 179.1 120 67.5
Thecc.04G183400 Theobroma cacao HOM05D002525 ORTHO05D002727 8.1e-43 177.2 121 67.8
vmacro00574 Vaccinium macrocarpon HOM05D002525 ORTHO05D002727 1.8e-42 176.0 129 65.1
Sabra14G0115300 Salix brachista HOM05D002525 ORTHO05D002727 1.2e-41 173.3 120 65.0
Manes.04G049700 Manihot esculenta HOM05D002525 ORTHO05D002727 1.5e-41 172.9 120 64.2
Potri.002G230700 Populus trichocarpa HOM05D002525 ORTHO05D002727 3.4e-41 171.8 120 65.8
Duzib151G0447 Durio zibethinus HOM05D002525 ORTHO05D002727 5.8e-41 171.0 121 65.3
Ciclev10021185m.g Citrus clementina HOM05D002525 ORTHO05D002727 2.2e-40 169.1 122 66.4
Potri.014G151700 Populus trichocarpa HOM05D002525 ORTHO05D002727 8.3e-40 167.2 120 65.0
QL10p046294 Quercus lobata HOM05D002525 ORTHO05D002727 6.0e-38 161.0 120 62.5
Atru.chr3.1641 Acer truncatum HOM05D002525 ORTHO05D002727 1.0e-37 160.2 120 63.3
COL.COLO4_24369 Corchorus olitorius HOM05D002525 ORTHO05D002727 1.0e-37 160.2 122 65.6
Cc03_g11230 Coffea canephora HOM05D002525 ORTHO05D002727 3.0e-37 158.7 119 59.7
Haze_00705 Corylus avellana HOM05D002525 ORTHO05D002727 3.0e-37 158.7 122 63.1
Cfa015788 Carpinus fangiana HOM05D002525 ORTHO05D002727 3.9e-37 158.3 120 64.2
TAR362G1149 Trochodendron aralioides HOM05D002525 ORTHO05D002727 5.1e-37 157.9 120 63.3
ClCG07G016560 Citrullus lanatus HOM05D002525 ORTHO05D002727 8.6e-37 157.1 122 56.6
CsaV3_4G003690 Cucumis sativus L. HOM05D002525 ORTHO05D002727 2.5e-36 155.6 122 54.9
Sp5g03800 Schrenkiella parvula HOM05D002525 ORTHO05D002727 4.3e-36 154.8 121 57.9
MD04G1036900 Malus domestica HOM05D002525 ORTHO05D002727 5.6e-36 154.5 120 58.3
HanXRQChr14g0454141 Helianthus annuus HOM05D002525 ORTHO05D002727 1.2e-35 153.3 120 57.5
Thhalv10005960m.g Eutrema salsugineum HOM05D002525 ORTHO05D002727 2.1e-35 152.5 121 57.9
arahy.Tifrunner.gnm1.ann1.8GR7XD Arachis hypogaea HOM05D002525 ORTHO05D002727 3.6e-35 151.8 116 59.5
CANSAT78G0936 Cannabis sativa HOM05D002525 ORTHO05D002727 3.6e-35 151.8 119 58.8
ECA248G3080 Erigeron canadensis HOM05D002525 ORTHO05D002727 3.6e-35 151.8 120 57.5
Gohir.1Z049479 Gossypium hirsutum HOM05D002525 ORTHO05D002727 3.6e-35 151.8 121 57.9
Gorai.009G350800 Gossypium raimondii HOM05D002525 ORTHO05D002727 3.6e-35 151.8 121 57.9
THA.LOC104803553 Tarenaya hassleriana HOM05D002525 ORTHO05D002727 4.7e-35 151.4 123 56.9
arahy.Tifrunner.gnm1.ann1.RBM2HP Arachis hypogaea HOM05D002525 ORTHO05D002727 6.2e-35 151.0 116 59.5
CARHR169680 Cardamine hirsuta HOM05D002525 ORTHO05D002727 6.2e-35 151.0 121 57.0
Gohir.D05G326200 Gossypium hirsutum HOM05D002525 ORTHO05D002727 6.2e-35 151.0 121 57.9
AL5G41180 Arabidopsis lyrata HOM05D002525 ORTHO05D002727 8.1e-35 150.6 121 56.2
AT3G59300 Arabidopsis thaliana HOM05D002525 ORTHO05D002727 8.1e-35 150.6 121 56.2
Medtr5g090150 Medicago truncatula HOM05D002525 ORTHO05D002727 8.1e-35 150.6 120 55.8
MELO3C017686.2 Cucumis melo HOM05D002525 ORTHO05D002727 1.1e-34 150.2 122 53.3
BraA09t40600Z Brassica rapa HOM05D002525 ORTHO05D002727 1.4e-34 149.8 121 56.2
Carub.0005s2604 Capsella rubella HOM05D002525 ORTHO05D002727 3.1e-34 148.7 116 56.9
BcaC07g40463 Brassica carinata HOM05D002525 ORTHO05D002727 5.2e-34 147.9 121 55.4
C08p34380 Brassica napus HOM05D002525 ORTHO05D002727 5.2e-34 147.9 121 55.4
BolC8t51037H Brassica oleracea HOM05D002525 ORTHO05D002727 5.2e-34 147.9 121 55.4
BraA07t30105Z Brassica rapa HOM05D002525 ORTHO05D002727 5.2e-34 147.9 121 56.2
BcaC07g40321 Brassica carinata HOM05D002525 ORTHO05D002727 6.8e-34 147.5 121 54.5
A09p51610 Brassica napus HOM05D002525 ORTHO05D002727 6.8e-34 147.5 121 55.4
C06p25940 Brassica napus HOM05D002525 ORTHO05D002727 6.8e-34 147.5 121 56.2
BolC6t37765H Brassica oleracea HOM05D002525 ORTHO05D002727 6.8e-34 147.5 121 56.2
Aa31LG10G13660 Aethionema arabicum HOM05D002525 ORTHO05D002727 8.9e-34 147.1 121 54.5
A07p24600 Brassica napus HOM05D002525 ORTHO05D002727 8.9e-34 147.1 121 56.2
Eucgr.H00428 Eucalyptus grandis HOM05D002525 ORTHO05D002727 1.2e-33 146.7 125 54.4
Nitab4.5_0002368g0070 Nicotiana tabacum HOM05D002525 ORTHO05D002727 1.5e-33 146.4 121 54.5
Nitab4.5_0005682g0010 Nicotiana tabacum HOM05D002525 ORTHO05D002727 4.4e-33 144.8 121 55.4
Ca_06229_v3 Cicer arietinum L. HOM05D002525 ORTHO05D002727 7.6e-33 144.1 124 52.4
RcHm_v2.0_Chr4g0408711 Rosa chinensis HOM05D002525 ORTHO05D002727 7.6e-33 144.1 121 55.4
Lsat_1_v5_gn_1_71460 Lactuca sativa HOM05D002525 ORTHO05D002727 1.7e-32 142.9 120 54.2
PGSC0003DMG400027004 Solanum tuberosum HOM05D002525 ORTHO05D002727 1.7e-32 142.9 121 55.4
Solyc06g073500.3 Solanum lycopersicum HOM05D002525 ORTHO05D002727 2.2e-32 142.5 121 55.4
RcHm_v2.0_Chr1g0335941 Rosa chinensis HOM05D002525 ORTHO05D002727 2.9e-32 142.1 120 55.8
FAN17G1718 Fragaria x ananassa HOM05D002525 ORTHO05D002727 1.4e-31 139.8 120 55.8
SalBow3G3324 Salvia bowleyana HOM05D002525 ORTHO05D002727 3.2e-31 138.7 120 52.5
FvH4_4g11600 Fragaria vesca HOM05D002525 ORTHO05D002727 7.1e-31 137.5 120 55.0
FAN12G1140 Fragaria x ananassa HOM05D002525 ORTHO05D002727 7.1e-31 137.5 120 55.0
FAN12G2385 Fragaria x ananassa HOM05D002525 ORTHO05D002727 7.1e-31 137.5 120 55.0
Glyma.14G033200 Glycine max HOM05D002525 ORTHO05D002727 9.2e-31 137.1 121 52.1
Sopen06g029860 Solanum pennellii HOM05D002525 ORTHO05D002727 9.2e-31 137.1 121 53.7
CiPaw.01G105000 Carya illinoinensis HOM05D002525 ORTHO05D002727 3.5e-30 135.2 120 57.5
FAN22G1390 Fragaria x ananassa HOM05D002525 ORTHO05D002727 3.5e-30 135.2 120 54.2
Lalb_Chr10g0106411 Lupinus albus HOM05D002525 ORTHO05D002727 7.8e-30 134.0 123 52.0
Migut.G01023 Erythranthe guttata HOM05D002525 ORTHO05D002727 8.6e-29 130.6 121 48.8
Lalb_Chr17g0348081 Lupinus albus HOM05D002525 ORTHO05D002727 8.6e-29 130.6 120 51.7
LjContig00049g0021232 Lotus japonicus HOM05D002525 ORTHO05D002727 3.3e-28 128.6 120 52.5
PGR142G2573 Punica granatum HOM05D002525 ORTHO05D002727 2.1e-27 125.9 121 55.4
CAN.G65.189 Capsicum annuum HOM05D002525 ORTHO05D002727 2.8e-27 125.6 121 49.6
TPR.G24735 Trifolium pratense HOM05D002525 ORTHO05D002727 6.2e-27 124.4 120 47.5
SGA_v2.0_scaffold12G06150 Striga asiatica HOM05D002525 ORTHO05D002727 1.8e-26 122.9 117 47.0
Peaxi162Scf00375g01017 Petunia axillaris HOM05D002525 ORTHO05D002727 3.1e-26 122.1 121 50.4
MBI08_g18912_MAGBIO Magnolia biondii HOM05D002525 ORTHO05D002727 1.5e-25 119.8 85 64.7
VMungo0647G1685 Vigna mungo HOM05D002525 ORTHO05D002727 1.5e-25 119.8 121 49.6
Phvul.008G199500 Phaseolus vulgaris HOM05D002525 ORTHO05D002727 1.7e-24 116.3 121 50.4
Os01g0899500 Oryza sativa ssp. japonica HOM05D002525 ORTHO05D002727 2.2e-24 115.9 96 59.4
Zm00001eb144530 Zea mays HOM05D002525 ORTHO05D002727 3.2e-23 112.1 94 55.3
PSO017G7186 Papaver somniferum HOM05D002525 ORTHO05D002727 1.2e-22 110.2 101 50.5
PSO675G4209 Papaver somniferum HOM05D002525 ORTHO05D002727 2.1e-22 109.4 104 48.1
ATR0743G277 Amborella trichopoda HOM05D002525 ORTHO05D002727 2.7e-22 109.0 114 49.1
Sed0019908 Sechium edule HOM05D002525 ORTHO05D002727 1.0e-21 107.1 120 45.0
Lj6A63T29 Lonicera japonica HOM05D002525 ORTHO05D002727 2.4e-18 95.9 74 54.1
CDE09G0420 Ceratophyllum demersum HOM05D002525 ORTHO05D002727 3.8e-16 88.6 122 38.5
Psat2g018040 Pisum sativum HOM05D000338 ORTHO05D002727 9.3e-15 84.0 121 42.1
Cpa.g.sc71.47 Carica papaya HOM05D002525 ORTHO05D002727 4.6e-14 81.6 50 70.0
Rhsim09G0034900 Rhododendron simsii HOM05D002525 ORTHO05D002727 8.7e-13 77.4 118 39.0
Oeu050358.1 Olea europaea HOM05D002525 ORTHO05D002727 7.4e-12 74.3 42 76.2
Oeu050359.1 Olea europaea HOM05D002525 ORTHO05D002727 3.6e-11 72.0 69 47.8
Oeu007722.2 Olea europaea HOM05D002525 ORTHO05D002727 9.0e-10 67.4 69 44.9
RcHm_v2.0_Chr1g0338021 Rosa chinensis HOM05D002525 ORTHO05D002727 1.5e-09 66.6 69 47.8
MBI01_g17607_MAGBIO Magnolia biondii HOM05D002525 ORTHO05D002727 2.9e-08 62.4 82 37.8
Rhsim03G0191900 Rhododendron simsii HOM05D002525 ORTHO05D002727 4.9e-08 61.6 111 32.4
TAR375G0662 Trochodendron aralioides HOM05D002525 ORTHO05D002727 4.9e-08 61.6 89 38.2
Migut.F00280 Erythranthe guttata HOM05D002525 ORTHO05D002727 1.1e-07 60.5 67 40.3
Dinv28381 Davidia involucrata HOM05D002525 ORTHO05D002727 1.4e-07 60.1 97 33.0
SGA_v2.0_scaffold44G16756 Striga asiatica HOM05D002525 ORTHO05D002727 1.4e-07 60.1 76 36.8
SalBow4G2719 Salvia bowleyana HOM05D002525 ORTHO05D002727 3.2e-07 58.9 84 34.5
MSTRG.8478 Avicennia marina HOM05D002525 ORTHO05D002727 9.3e-07 57.4 61 41.0
Cfa016300 Carpinus fangiana HOM05D002525 ORTHO05D002727 1.2e-06 57.0 95 33.7
Haze_00057 Corylus avellana HOM05D002525 ORTHO05D002727 1.2e-06 57.0 90 35.6
CDE02G4087 Ceratophyllum demersum HOM05D002525 ORTHO05D002727 2.1e-06 56.2 107 32.7
Potri.017G148600 Populus trichocarpa HOM05D002525 ORTHO05D002727 2.1e-06 56.2 73 35.6
COL.COLO4_30295 Corchorus olitorius HOM05D002525 ORTHO05D002727 2.7e-06 55.8 76 35.5
vmacro06618 Vaccinium macrocarpon HOM05D002525 ORTHO05D002727 2.7e-06 55.8 94 36.2
Gohir.A08G085500 Gossypium hirsutum HOM05D002525 ORTHO05D002727 3.5e-06 55.5 79 35.4
Gohir.D08G109300 Gossypium hirsutum HOM05D002525 ORTHO05D002727 3.5e-06 55.5 79 35.4
Gorai.004G117000 Gossypium raimondii HOM05D002525 ORTHO05D002727 3.5e-06 55.5 79 35.4
Hma1.2p1_0327F.1_g126480 Hydrangea macrophylla HOM05D002525 ORTHO05D002727 3.5e-06 55.5 88 31.8
Thecc.03G185700 Theobroma cacao HOM05D002525 ORTHO05D002727 3.5e-06 55.5 76 32.9
HPP92_005391 Vanilla planifolia HOM05D002525 ORTHO05D002727 3.5e-06 55.5 50 48.0
Duzib205G1599 Durio zibethinus HOM05D002525 ORTHO05D002727 4.6e-06 55.1 76 34.2
PSO266G0052 Papaver somniferum HOM05D002525 ORTHO05D002727 4.6e-06 55.1 77 36.4
PSO478G0963 Papaver somniferum HOM05D002525 ORTHO05D002727 4.6e-06 55.1 77 36.4
Oeu032744.1 Olea europaea HOM05D002525 ORTHO05D002727 7.9e-06 54.3 112 27.7
SGA_v2.0_scaffold60G21118 Striga asiatica HOM05D002525 ORTHO05D002727 7.9e-06 54.3 91 31.9


User provided reference genes

Program Settings