Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0039680 Camellia sinensis var. sinensis HOM05D011242 ORTHO05D012494 4.8e-103 377.9 193 100.0
CSS0046795 Camellia sinensis var. sinensis HOM05D011242 ORTHO05D012494 4.5e-93 344.7 203 89.7
CSS0033649 Camellia sinensis var. sinensis HOM05D011242 ORTHO05D012494 1.0e-92 343.6 203 89.2
CSS0004605 Camellia sinensis var. sinensis HOM05D011242 ORTHO05D012494 1.7e-92 342.8 203 89.2
CSS0023584 Camellia sinensis var. sinensis HOM05D011242 ORTHO05D012494 1.9e-91 339.3 198 89.9
CSS0005556 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 4.6e-90 334.7 205 87.3
CSS0010984 Camellia sinensis var. sinensis HOM05D011242 ORTHO05D012494 9.4e-75 283.9 202 76.2
CSS0014156 Camellia sinensis var. sinensis HOM05D011242 ORTHO05D012494 6.3e-71 271.2 189 78.3
CSS0038307 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 1.9e-67 259.6 193 73.6
CSS0041790 Camellia sinensis var. sinensis HOM05D011242 ORTHO05D012494 2.8e-55 219.2 221 54.8
CSS0025555 Camellia sinensis var. sinensis HOM05D011242 ORTHO05D012494 2.3e-49 199.5 209 54.5
CSS0030897 Camellia sinensis var. sinensis HOM05D011242 ORTHO05D012494 1.5e-27 127.1 156 48.7
CSS0030058 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 2.9e-23 112.8 235 38.7
CSS0007143 Camellia sinensis var. sinensis HOM05D011242 ORTHO05D012494 2.4e-22 109.8 91 60.4
QL03p030360 Quercus lobata HOM05D000045 ORTHO05D000067 3.1e-17 92.8 163 40.5
CSS0047537 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 6.4e-15 85.1 92 47.8
QL05p086352 Quercus lobata HOM05D000045 ORTHO05D000067 8.3e-15 84.7 88 51.1
vmacro17252 Vaccinium macrocarpon HOM05D000045 ORTHO05D009940 1.6e-10 70.5 187 32.6
vmacro12589 Vaccinium macrocarpon HOM05D006631 ORTHO05D008359 3.1e-09 66.2 94 42.6
CSS0004826 Camellia sinensis var. sinensis HOM05D057373 ORTHO05D012494 2.0e-08 63.5 94 43.6
vmacro03885 Vaccinium macrocarpon HOM05D011242 ORTHO05D012494 9.9e-08 61.2 140 34.3
Hma1.2p1_0002F.1_g002660 Hydrangea macrophylla HOM05D000045 ORTHO05D012494 1.3e-07 60.8 94 43.6
ECA238G2966 Erigeron canadensis HOM05D000045 ORTHO05D000067 1.9e-06 57.0 145 30.3
Hma1.2p1_3064F.1_g332250 Hydrangea macrophylla HOM05D000045 ORTHO05D009940 1.9e-06 57.0 115 35.7
vmacro19402 Vaccinium macrocarpon HOM05D011242 ORTHO05D012494 5.4e-06 55.5 129 33.3
Atru.chr12.1768 Acer truncatum HOM05D000045 ORTHO05D009940 9.2e-06 54.7 100 38.0


User provided reference genes

Program Settings