Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0039646 Camellia sinensis var. sinensis HOM05D019829 ORTHO05D007789 2.2e-91 339.0 172 100.0
CSS0006926 Camellia sinensis var. sinensis HOM05D019829 ORTHO05D007789 9.2e-82 307.0 172 91.3
CSS0001720 Camellia sinensis var. sinensis HOM05D019829 ORTHO05D007789 5.6e-79 297.7 172 89.0
CSS0019356 Camellia sinensis var. sinensis HOM05D019829 ORTHO05D007789 1.3e-43 180.3 107 86.0
CSS0046849 Camellia sinensis var. sinensis HOM05D019829 ORTHO05D007789 3.7e-30 135.6 94 76.6
CSS0012798 Camellia sinensis var. sinensis HOM05D019829 ORTHO05D007789 1.4e-29 133.7 106 67.9
Actinidia14014 Actinidia chinensis HOM05D008623 ORTHO05D010647 6.1e-17 91.7 139 43.2
Dinv01175 Davidia involucrata HOM05D008623 ORTHO05D007789 3.7e-14 82.4 116 42.2
QL10p030102 Quercus lobata HOM05D019990 ORTHO05D007789 1.4e-13 80.5 149 37.6
Dinv41634 Davidia involucrata HOM05D008623 ORTHO05D007789 2.4e-13 79.7 116 42.2
Lj1A798T45 Lonicera japonica HOM05D011954 ORTHO05D014236 2.6e-12 76.3 147 34.7
QL10p030090 Quercus lobata HOM05D019990 ORTHO05D007789 2.6e-12 76.3 149 37.6
QL10p030388 Quercus lobata HOM05D019990 ORTHO05D007789 2.6e-12 76.3 127 37.0
QL10p030420 Quercus lobata HOM05D019990 ORTHO05D007789 2.6e-12 76.3 127 37.0
QL10p030347 Quercus lobata HOM05D019990 ORTHO05D007789 5.9e-12 75.1 127 37.0
Actinidia04665 Actinidia chinensis HOM05D008623 ORTHO05D010647 1.0e-11 74.3 127 39.4
CSS0001693 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 2.9e-11 72.8 131 38.9
Rhsim12G0199400 Rhododendron simsii HOM05D009663 ORTHO05D007789 3.8e-11 72.4 104 45.2
Dinv04048 Davidia involucrata HOM05D000041 ORTHO05D019419 5.0e-11 72.0 110 39.1
CSS0009704 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 1.1e-10 70.9 119 36.1
Dinv41569 Davidia involucrata HOM05D008623 ORTHO05D007789 1.4e-10 70.5 125 37.6
Hma1.2p1_0785F.1_g217500 Hydrangea macrophylla HOM05D008623 ORTHO05D007789 1.9e-10 70.1 137 35.0
Rhsim13G0019200 Rhododendron simsii HOM05D009663 ORTHO05D007789 7.2e-10 68.2 125 37.6
BcaC01g06452 Brassica carinata HOM05D007210 ORTHO05D006152 1.2e-09 67.4 152 29.6
Cc02_g24850 Coffea canephora HOM05D021019 ORTHO05D010647 1.6e-09 67.0 140 34.3
TWI73G0560 Tripterygium wilfordii HOM05D018753 ORTHO05D007789 1.6e-09 67.0 181 29.8
TWI73G1234 Tripterygium wilfordii HOM05D018753 ORTHO05D007789 1.6e-09 67.0 181 29.8
TWI73G0112 Tripterygium wilfordii HOM05D018753 ORTHO05D007789 2.1e-09 66.6 179 31.3
CSS0000671 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 3.6e-09 65.9 122 35.2
CSS0007245 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 3.6e-09 65.9 122 35.2
vmacro16961 Vaccinium macrocarpon HOM05D009663 ORTHO05D007789 4.7e-09 65.5 137 34.3
CSS0009631 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 8.0e-09 64.7 184 32.1
BcaB01g04427 Brassica carinata HOM05D007210 ORTHO05D006152 1.4e-08 63.9 158 27.8
CSS0008461 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 1.4e-08 63.9 122 35.2
Dinv41577 Davidia involucrata HOM05D008623 ORTHO05D007789 1.8e-08 63.5 107 36.4
RhsimUnG0120300 Rhododendron simsii HOM05D009663 ORTHO05D007789 2.3e-08 63.2 98 41.8
Sed0015244 Sechium edule HOM05D008623 ORTHO05D007789 2.3e-08 63.2 120 33.3
TWI36G0009 Tripterygium wilfordii HOM05D018753 ORTHO05D007789 3.9e-08 62.4 125 32.0
arahy.Tifrunner.gnm1.ann1.52E6WN Arachis hypogaea HOM05D010841 ORTHO05D007789 5.2e-08 62.0 90 40.0
A03p13080 Brassica napus HOM05D007210 ORTHO05D006152 5.2e-08 62.0 150 29.3
BolC3t13970H Brassica oleracea HOM05D007210 ORTHO05D006152 5.2e-08 62.0 150 28.7
BraA03t10619Z Brassica rapa HOM05D007210 ORTHO05D006152 5.2e-08 62.0 150 29.3
arahy.Tifrunner.gnm1.ann1.E31NWF Arachis hypogaea HOM05D010841 ORTHO05D007789 8.8e-08 61.2 90 40.0
A03p13090 Brassica napus HOM05D007210 ORTHO05D006152 8.8e-08 61.2 157 29.3
BraA03t10618Z Brassica rapa HOM05D007210 ORTHO05D006152 8.8e-08 61.2 157 29.3
arahy.Tifrunner.gnm1.ann1.B6M36H Arachis hypogaea HOM05D010841 ORTHO05D007789 1.1e-07 60.8 90 40.0
BcaC01g06453 Brassica carinata HOM05D007210 ORTHO05D006152 1.1e-07 60.8 151 28.5
BcaNung05242 Brassica carinata HOM05D007210 ORTHO05D006152 1.1e-07 60.8 151 28.5
BcaB01g04428 Brassica carinata HOM05D007210 ORTHO05D006152 1.5e-07 60.5 150 28.0
C03p15310 Brassica napus HOM05D007210 ORTHO05D006152 1.5e-07 60.5 143 30.8
Duzib168G1026 Durio zibethinus HOM05D016489 ORTHO05D007789 1.5e-07 60.5 162 29.0
Duzib168G2238 Durio zibethinus HOM05D016489 ORTHO05D007789 1.5e-07 60.5 162 29.0
CARHR048290 Cardamine hirsuta HOM05D007210 ORTHO05D006152 2.0e-07 60.1 135 32.6
Rhsim08G0153800 Rhododendron simsii HOM05D042119 ORTHO05D007789 2.6e-07 59.7 138 33.3
Duzib168G1555 Durio zibethinus HOM05D016489 ORTHO05D007789 3.3e-07 59.3 162 28.4
PGR083G2548 Punica granatum HOM05D008623 ORTHO05D007789 3.3e-07 59.3 125 34.4
TWI36G0611 Tripterygium wilfordii HOM05D018753 ORTHO05D007789 3.3e-07 59.3 116 36.2
BolC3t13971H Brassica oleracea HOM05D007210 ORTHO05D006152 4.4e-07 58.9 154 28.6
C09p48590 Brassica napus HOM05D007210 ORTHO05D006152 5.7e-07 58.5 152 30.3
TWI36G0661 Tripterygium wilfordii HOM05D018753 ORTHO05D007789 5.7e-07 58.5 116 31.9
CSS0027810 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 7.4e-07 58.2 170 31.2
Rhsim13G0014700 Rhododendron simsii HOM05D009663 ORTHO05D007789 7.4e-07 58.2 128 35.2
Lj1A748T28 Lonicera japonica HOM05D011954 ORTHO05D014236 9.7e-07 57.8 122 34.4
Rhsim10G0206900 Rhododendron simsii HOM05D009663 ORTHO05D007789 9.7e-07 57.8 90 41.1
Sed0026611 Sechium edule HOM05D008623 ORTHO05D007789 9.7e-07 57.8 102 35.3
arahy.Tifrunner.gnm1.ann1.U7E3JB Arachis hypogaea HOM05D010841 ORTHO05D007789 1.3e-06 57.4 91 36.3
BcaC01g06454 Brassica carinata HOM05D007210 ORTHO05D006152 1.3e-06 57.4 125 31.2
C03p15300 Brassica napus HOM05D007210 ORTHO05D006152 1.3e-06 57.4 125 31.2
AL2G12230 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 1.7e-06 57.0 129 30.2
Carub.0002s0170 Capsella rubella HOM05D007210 ORTHO05D006152 1.7e-06 57.0 142 28.2
PGR083G2854 Punica granatum HOM05D008623 ORTHO05D007789 1.7e-06 57.0 125 32.8
Aa31LG4G17100 Aethionema arabicum HOM05D002666 ORTHO05D004769 2.2e-06 56.6 130 33.8
AL2G12220 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 2.8e-06 56.2 129 31.0
DCAR_027027 Daucus carota HOM05D014660 ORTHO05D016977 2.8e-06 56.2 171 28.1
arahy.Tifrunner.gnm1.ann1.W55X99 Arachis hypogaea HOM05D010841 ORTHO05D007789 4.8e-06 55.5 91 34.1
arahy.Tifrunner.gnm1.ann1.J4CNX7 Arachis hypogaea HOM05D010841 ORTHO05D007789 6.3e-06 55.1 91 36.3
A10p14190 Brassica napus HOM05D007210 ORTHO05D006152 6.3e-06 55.1 142 31.7
BraA10t43512Z Brassica rapa HOM05D007210 ORTHO05D006152 6.3e-06 55.1 142 31.7
PGR083G1822 Punica granatum HOM05D008623 ORTHO05D007789 6.3e-06 55.1 125 32.0
Aa31LG4G17090 Aethionema arabicum HOM05D002666 ORTHO05D004769 8.2e-06 54.7 130 33.1
Aa31LG8G17520 Aethionema arabicum HOM05D002666 ORTHO05D004769 8.2e-06 54.7 138 32.6
AL4G33850 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 8.2e-06 54.7 152 27.0
CSS0032446 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 8.2e-06 54.7 118 31.4


User provided reference genes

Program Settings