Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0039588 Camellia sinensis var. sinensis HOM05D006215 ORTHO05D007719 1.3e-118 429.9 230 100.0
CSS0005676 Camellia sinensis var. sinensis HOM05D006215 ORTHO05D007719 5.3e-117 424.5 228 99.6
Rhsim06G0017400 Rhododendron simsii HOM05D006215 ORTHO05D007719 3.3e-87 325.5 229 73.8
vmacro21863 Vaccinium macrocarpon HOM05D006215 ORTHO05D007719 7.4e-87 324.3 192 82.8
Prupe.4G165400 Prunus persica HOM05D006215 ORTHO05D007719 5.3e-85 318.2 183 82.0
Dinv31883 Davidia involucrata HOM05D006215 ORTHO05D007719 1.2e-84 317.0 239 70.3
Potri.002G018100 Populus trichocarpa HOM05D006215 ORTHO05D007719 1.0e-83 313.9 176 84.1
Solyc04g081850.4 Solanum lycopersicum HOM05D006215 ORTHO05D007719 1.7e-83 313.2 183 79.2
Sopen04g035480 Solanum pennellii HOM05D006215 ORTHO05D007719 8.5e-83 310.8 183 79.2
PGSC0003DMG400009949 Solanum tuberosum HOM05D006215 ORTHO05D007719 1.5e-82 310.1 227 68.3
MD03G1242500 Malus domestica HOM05D006215 ORTHO05D007719 4.2e-82 308.5 183 80.3
Manes.18G010300 Manihot esculenta HOM05D006215 ORTHO05D007719 7.2e-82 307.8 175 82.3
RcHm_v2.0_Chr5g0031011 Rosa chinensis HOM05D006215 ORTHO05D007719 7.2e-82 307.8 183 79.8
FAN11G1504 Fragaria x ananassa HOM05D006215 ORTHO05D007719 1.2e-81 307.0 183 78.7
QL02p012562 Quercus lobata HOM05D006215 ORTHO05D007719 1.2e-81 307.0 176 84.1
DCAR_009503 Daucus carota HOM05D006215 ORTHO05D007719 2.7e-81 305.8 175 84.0
Cfa013993 Carpinus fangiana HOM05D006215 ORTHO05D007719 3.6e-81 305.4 176 83.0
GSVIVG01009974001 Vitis vinifera HOM05D006215 ORTHO05D009429 3.0e-80 302.4 172 84.3
FAN25G2739 Fragaria x ananassa HOM05D006215 ORTHO05D007719 4.0e-80 302.0 183 77.6
Ciclev10002478m.g Citrus clementina HOM05D006215 ORTHO05D007719 8.8e-80 300.8 177 80.8
Thecc.08G049400 Theobroma cacao HOM05D006215 ORTHO05D007719 8.8e-80 300.8 176 81.2
MSTRG.1158 Avicennia marina HOM05D006215 ORTHO05D007719 1.2e-79 300.4 227 66.5
Lj4C18G8 Lonicera japonica HOM05D000114 ORTHO05D009837 1.5e-79 300.1 176 80.7
Sabra02G0014400 Salix brachista HOM05D006215 ORTHO05D007719 1.5e-79 300.1 216 68.5
Cpa.g.sc26.282 Carica papaya HOM05D006215 ORTHO05D007719 3.3e-79 298.9 176 80.7
Gohir.D01G096200 Gossypium hirsutum HOM05D006215 ORTHO05D007719 3.3e-79 298.9 185 77.3
COL.COLO4_26102 Corchorus olitorius HOM05D006215 ORTHO05D007719 7.5e-79 297.7 175 78.9
Gohir.A01G109400 Gossypium hirsutum HOM05D006215 ORTHO05D007719 9.7e-79 297.4 185 76.8
arahy.Tifrunner.gnm1.ann1.89BLSN Arachis hypogaea HOM05D006215 ORTHO05D007719 1.7e-78 296.6 173 80.9
Duzib041G0142 Durio zibethinus HOM05D006215 ORTHO05D007719 2.8e-78 295.8 175 79.4
Gorai.002G121700 Gossypium raimondii HOM05D006215 ORTHO05D007719 2.8e-78 295.8 185 76.2
Atru.chr13.240 Acer truncatum HOM05D006215 ORTHO05D007719 3.7e-78 295.4 183 78.7
Lj1g0006385 Lotus japonicus HOM05D006215 ORTHO05D007719 1.1e-77 293.9 182 76.9
Sed0008956 Sechium edule HOM05D006215 ORTHO05D007719 3.1e-77 292.4 173 79.2
Migut.C00887 Erythranthe guttata HOM05D006215 ORTHO05D007719 4.1e-77 292.0 171 80.7
Nn5g30812 Nelumbo nucifera HOM05D006215 ORTHO05D007719 5.3e-77 291.6 173 79.2
Phvul.009G018900 Phaseolus vulgaris HOM05D006215 ORTHO05D007719 7.0e-77 291.2 183 75.4
VMungo1215G3215 Vigna mungo HOM05D006215 ORTHO05D007719 9.1e-77 290.8 179 77.1
Glyma.06G021900 Glycine max HOM05D006215 ORTHO05D007719 2.0e-76 289.7 173 80.3
Lalb_Chr23g0266051 Lupinus albus HOM05D006215 ORTHO05D007719 2.7e-76 289.3 183 75.4
CsaV3_3G046060 Cucumis sativus L. HOM05D006215 ORTHO05D007719 5.9e-76 288.1 179 77.7
CAN.G311.58 Capsicum annuum HOM05D006215 ORTHO05D007719 7.7e-76 287.7 183 75.4
Glyma.04G021700 Glycine max HOM05D006215 ORTHO05D007719 7.7e-76 287.7 183 75.4
Medtr3g114470 Medicago truncatula HOM05D006215 ORTHO05D007719 1.3e-75 287.0 178 75.3
Lsat_1_v5_gn_8_29640 Lactuca sativa HOM05D006215 ORTHO05D007719 1.7e-75 286.6 175 76.6
CANSAT25G1322 Cannabis sativa HOM05D006215 ORTHO05D007719 5.0e-75 285.0 176 78.4
Ca_15473_v3 Cicer arietinum L. HOM05D006215 ORTHO05D007719 6.5e-75 284.6 173 78.0
CANSAT80G2378 Cannabis sativa HOM05D006215 ORTHO05D007719 8.5e-75 284.3 184 74.5
SGA_v2.0_scaffold292G47375 Striga asiatica HOM05D006215 ORTHO05D007719 1.5e-74 283.5 174 77.0
ECA233G5922 Erigeron canadensis HOM05D000114 ORTHO05D000075 3.2e-74 282.3 175 76.6
HanXRQChr13g0386921 Helianthus annuus HOM05D006215 ORTHO05D007719 3.2e-74 282.3 177 75.7
Rhsim06G0015300 Rhododendron simsii HOM05D006215 ORTHO05D007719 3.2e-74 282.3 229 66.8
Psat5g012560 Pisum sativum HOM05D006215 ORTHO05D007719 4.2e-74 282.0 183 72.1
TWI12G0400 Tripterygium wilfordii HOM05D006215 ORTHO05D007719 9.4e-74 280.8 176 76.7
HPP92_025438 Vanilla planifolia HOM05D006215 ORTHO05D007719 6.8e-72 274.6 179 73.7
SalBow7G2905 Salvia bowleyana HOM05D006215 ORTHO05D007719 4.4e-71 271.9 196 67.9
THA.LOC104811433 Tarenaya hassleriana HOM05D006215 ORTHO05D007719 7.5e-71 271.2 201 68.2
MELO3C003734.2 Cucumis melo HOM05D006215 ORTHO05D007719 1.3e-70 270.4 163 81.6
EL10Ac1g02129 Beta vulgaris HOM05D006215 ORTHO05D007719 2.2e-70 269.6 176 73.9
Aqoxy5G01831 Aquilegia oxysepala HOM05D006215 ORTHO05D007719 4.8e-70 268.5 176 72.2
unitig_32.g11202 Utricularia gibba HOM05D006215 ORTHO05D007719 4.8e-70 268.5 179 72.6
A07p28630 Brassica napus HOM05D006215 ORTHO05D007719 2.4e-69 266.2 184 70.7
BraA07t30504Z Brassica rapa HOM05D006215 ORTHO05D007719 2.4e-69 266.2 184 70.7
Actinidia15453 Actinidia chinensis HOM05D006215 ORTHO05D007719 3.1e-69 265.8 227 70.5
BcaB02g07052 Brassica carinata HOM05D006215 ORTHO05D007719 4.1e-69 265.4 183 69.4
A07p41490 Brassica napus HOM05D006215 ORTHO05D007719 4.1e-69 265.4 183 68.9
BraA07t31681Z Brassica rapa HOM05D006215 ORTHO05D007719 4.1e-69 265.4 183 68.9
Oeu033622.1 Olea europaea HOM05D006215 ORTHO05D007719 4.1e-69 265.4 179 70.9
BcaC08g45544 Brassica carinata HOM05D006215 ORTHO05D007719 5.4e-69 265.0 184 71.2
C06p32240 Brassica napus HOM05D006215 ORTHO05D007719 5.4e-69 265.0 184 71.2
BolC6t38347H Brassica oleracea HOM05D006215 ORTHO05D007719 5.4e-69 265.0 184 71.2
Thhalv10019087m.g Eutrema salsugineum HOM05D006215 ORTHO05D007719 2.0e-68 263.1 173 72.8
AT1G75980 Arabidopsis thaliana HOM05D006215 ORTHO05D007719 3.5e-68 262.3 173 72.3
BcaB05g24966 Brassica carinata HOM05D006215 ORTHO05D007719 2.9e-67 259.2 173 72.3
Carub.0002s2287 Capsella rubella HOM05D006215 ORTHO05D007719 3.8e-67 258.8 173 72.3
AL2G36000 Arabidopsis lyrata HOM05D006215 ORTHO05D007719 5.0e-67 258.5 172 72.1
Hund01696 Selenicereus undatus HOM05D006215 ORTHO05D007719 6.6e-67 258.1 177 70.6
C06p49900 Brassica napus HOM05D006215 ORTHO05D007719 2.5e-66 256.1 173 69.9
Nitab4.5_0004361g0040 Nicotiana tabacum HOM05D006215 ORTHO05D007719 3.3e-66 255.8 143 85.3
PSO339G6481 Papaver somniferum HOM05D006215 ORTHO05D007719 3.3e-66 255.8 182 71.4
Sp5g31100 Schrenkiella parvula HOM05D006215 ORTHO05D007719 5.5e-66 255.0 173 69.9
ClCG05G015490 Citrullus lanatus HOM05D006215 ORTHO05D007719 9.5e-66 254.2 222 61.7
PSO384G0480 Papaver somniferum HOM05D006215 ORTHO05D007719 1.6e-65 253.4 182 70.9
BcaC08g47309 Brassica carinata HOM05D006215 ORTHO05D007719 2.1e-65 253.1 173 69.4
Zm00001eb209250 Zea mays HOM05D006215 ORTHO05D007719 2.1e-65 253.1 172 66.3
CARHR069510 Cardamine hirsuta HOM05D006215 ORTHO05D007719 6.1e-65 251.5 176 68.2
AUR62013912 Chenopodium quinoa HOM05D006215 ORTHO05D007719 2.3e-64 249.6 169 71.0
FvH4_3g18360 Fragaria vesca HOM05D006215 ORTHO05D007719 2.3e-64 249.6 152 76.3
CDE04G3084 Ceratophyllum demersum HOM05D006215 ORTHO05D007719 5.2e-64 248.4 152 76.3
CiPaw.07G144900 Carya illinoinensis HOM05D006215 ORTHO05D007719 9.8e-63 244.2 151 78.8
Eucgr.F03725 Eucalyptus grandis HOM05D006215 ORTHO05D007719 4.5e-60 235.3 148 77.0
Peaxi162Scf00860g00212 Petunia axillaris HOM05D006215 ORTHO05D007719 3.9e-59 232.3 176 66.5
TPR.G38171 Trifolium pratense HOM05D006215 ORTHO05D007719 2.5e-58 229.6 133 81.2
Os02g0120400 Oryza sativa ssp. japonica HOM05D006215 ORTHO05D007719 2.1e-57 226.5 137 75.2
PGR083G2507 Punica granatum HOM05D006215 ORTHO05D007719 2.0e-55 219.9 182 64.3
Actinidia17011 Actinidia chinensis HOM05D006215 ORTHO05D007719 5.4e-53 211.8 160 69.4
ATR1088G027 Amborella trichopoda HOM05D006215 ORTHO05D007719 1.3e-51 207.2 151 70.9
TAR625G0502 Trochodendron aralioides HOM05D006215 ORTHO05D007719 3.9e-51 205.7 147 68.7
arahy.Tifrunner.gnm1.ann1.SEC0EX Arachis hypogaea HOM05D006215 ORTHO05D007719 7.3e-50 201.4 196 57.1
AUR62018279 Chenopodium quinoa HOM05D006215 ORTHO05D007719 7.3e-50 201.4 167 59.9
Duzib093G1443 Durio zibethinus HOM05D006215 ORTHO05D007719 6.8e-48 194.9 126 74.6
Pp3c20_3890 Physcomitrium patens HOM05D006215 ORTHO05D007719 1.4e-45 187.2 165 54.5
Mapoly0001s0313 Marchantia polymorpha HOM05D006215 ORTHO05D007719 5.4e-45 185.3 167 53.9
FAN21G0515 Fragaria x ananassa HOM05D006215 ORTHO05D007719 4.6e-44 182.2 183 52.5
Sc15g0004750 Simmondsia chinensis HOM05D006215 ORTHO05D007719 1.9e-42 176.8 128 67.2
SMO367G0408 Selaginella moellendorffii HOM05D006215 ORTHO05D007719 4.3e-42 175.6 168 50.0
Aa31LG4G6130 Aethionema arabicum HOM05D006215 ORTHO05D007719 1.4e-40 170.6 176 51.1
Cc10_g01280 Coffea canephora HOM05D006215 ORTHO05D007719 2.4e-37 159.8 93 76.3
Eucgr.F03727 Eucalyptus grandis HOM05D006215 ORTHO05D007719 1.1e-34 151.0 85 81.2
Haze_22683 Corylus avellana HOM05D006215 ORTHO05D007719 4.3e-34 149.1 107 70.1
BolC6t40028H Brassica oleracea HOM05D006215 ORTHO05D007719 1.6e-33 147.1 123 59.3
SHI08014 Sapria himalayana HOM05D006215 ORTHO05D007719 2.1e-33 146.7 121 59.5
CANSAT25G3730 Cannabis sativa HOM05D006215 ORTHO05D007719 6.2e-33 145.2 98 70.4
Cc10_g01290 Coffea canephora HOM05D006215 ORTHO05D007719 1.7e-30 137.1 84 76.2
Ah.06g187190 Amaranthus hybridus HOM05D006215 ORTHO05D007719 5.4e-29 132.1 114 59.6
SEGI_18034 Sequoiadendron giganteum HOM05D006215 ORTHO05D007719 2.4e-24 116.7 95 60.0
AagrBONN_evm.TU.Sc2ySwM_117.1002 Anthoceros agrestis HOM05D006215 ORTHO05D007719 1.2e-23 114.4 123 49.6
Glyma.02G160800 Glycine max HOM05D006215 ORTHO05D007719 4.4e-23 112.5 63 77.8
Carub.0005s0222 Capsella rubella HOM05D006215 ORTHO05D007719 9.9e-23 111.3 70 81.4
CBR_g54848 Chara braunii HOM05D006215 ORTHO05D007719 2.2e-22 110.2 126 46.0
Medtr6g083100 Medicago truncatula HOM05D006215 ORTHO05D007719 3.2e-21 106.3 120 50.0
BcaC03g15638 Brassica carinata HOM05D006215 ORTHO05D007719 1.1e-18 97.8 99 56.6
Lsat_1_v5_gn_4_111221 Lactuca sativa HOM05D006215 ORTHO05D007719 5.3e-16 89.0 54 77.8
C02p33520 Brassica napus HOM05D006215 ORTHO05D007719 1.3e-14 84.3 71 64.8
BolC2t09353H Brassica oleracea HOM05D006215 ORTHO05D007719 2.1e-12 77.0 71 60.6
MCO13G478 Micromonas commoda HOM05D006215 ORTHO05D007719 3.9e-11 72.8 109 33.0
MD11G1262900 Malus domestica HOM05D006215 ORTHO05D007719 3.3e-10 69.7 39 84.6
A02p20380 Brassica napus HOM05D006215 ORTHO05D007719 7.4e-10 68.6 48 70.8
TPR.G38152 Trifolium pratense HOM05D006215 ORTHO05D007719 2.8e-09 66.6 43 69.8


User provided reference genes

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