Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0039551 Camellia sinensis var. sinensis HOM05D003890 ORTHO05D004514 9.0e-74 280.0 128 100.0
TAR636G2753 Trochodendron aralioides HOM05D003890 ORTHO05D004514 3.6e-38 161.8 82 92.7
arahy.Tifrunner.gnm1.ann1.HEYT23 Arachis hypogaea HOM05D003890 ORTHO05D004514 1.0e-37 160.2 82 90.2
Sabra09G0038800 Salix brachista HOM05D003890 ORTHO05D004514 2.3e-37 159.1 98 78.6
arahy.Tifrunner.gnm1.ann1.5L0PCQ Arachis hypogaea HOM05D003890 ORTHO05D004514 3.0e-37 158.7 82 90.2
Potri.009G053300 Populus trichocarpa HOM05D003890 ORTHO05D004514 3.0e-37 158.7 82 91.5
Dinv36258 Davidia involucrata HOM05D003890 ORTHO05D004514 3.9e-37 158.3 82 90.2
TAR633G1481 Trochodendron aralioides HOM05D003890 ORTHO05D004514 6.7e-37 157.5 82 89.0
Atru.chr3.2715 Acer truncatum HOM05D003890 ORTHO05D004514 8.8e-37 157.1 82 87.8
Cpa.g.sc84.53 Carica papaya HOM05D003890 ORTHO05D004514 8.8e-37 157.1 82 87.8
Hma1.2p1_0027F.1_g017050 Hydrangea macrophylla HOM05D003890 ORTHO05D004514 1.5e-36 156.4 82 89.0
Sabra16G0157800 Salix brachista HOM05D003890 ORTHO05D004514 1.5e-36 156.4 82 87.8
VMungo0540G2384 Vigna mungo HOM05D003890 ORTHO05D004514 1.5e-36 156.4 82 89.0
Duzib150G1364 Durio zibethinus HOM05D003890 ORTHO05D004514 2.0e-36 156.0 82 85.4
PGR102G1724 Punica granatum HOM05D003890 ORTHO05D004514 3.3e-36 155.2 82 86.6
DCAR_002072 Daucus carota HOM05D003890 ORTHO05D004514 4.3e-36 154.8 82 87.8
Phvul.006G062600 Phaseolus vulgaris HOM05D003890 ORTHO05D004514 4.3e-36 154.8 82 87.8
vmacro12718 Vaccinium macrocarpon HOM05D003890 ORTHO05D004514 4.3e-36 154.8 95 76.8
GSVIVG01032095001 Vitis vinifera HOM05D003890 ORTHO05D004514 4.3e-36 154.8 82 84.1
Potri.001G258100 Populus trichocarpa HOM05D003890 ORTHO05D004514 5.7e-36 154.5 82 87.8
QL01p004686 Quercus lobata HOM05D003890 ORTHO05D004514 5.7e-36 154.5 81 86.4
Thecc.09G233900 Theobroma cacao HOM05D003890 ORTHO05D004514 5.7e-36 154.5 82 84.1
Ciclev10016574m.g Citrus clementina HOM05D003890 ORTHO05D004514 7.4e-36 154.1 82 85.4
Glyma.18G070500 Glycine max HOM05D003890 ORTHO05D004514 7.4e-36 154.1 82 87.8
CiPaw.13G160900 Carya illinoinensis HOM05D003890 ORTHO05D004514 9.7e-36 153.7 98 74.5
Haze_23135 Corylus avellana HOM05D000807 ORTHO05D000662 1.3e-35 153.3 82 86.6
Actinidia06907 Actinidia chinensis HOM05D003890 ORTHO05D004514 1.7e-35 152.9 82 87.8
COL.COLO4_07583 Corchorus olitorius HOM05D003890 ORTHO05D004514 1.7e-35 152.9 82 84.1
Glyma.08G335500 Glycine max HOM05D003890 ORTHO05D004514 1.7e-35 152.9 82 86.6
Gohir.A05G069400 Gossypium hirsutum HOM05D003890 ORTHO05D004514 1.7e-35 152.9 82 81.7
Gohir.D05G072300 Gossypium hirsutum HOM05D003890 ORTHO05D004514 1.7e-35 152.9 82 81.7
Gorai.009G073300 Gossypium raimondii HOM05D003890 ORTHO05D004514 1.7e-35 152.9 82 81.7
Ca_14881_v3 Cicer arietinum L. HOM05D003890 ORTHO05D004514 2.2e-35 152.5 82 85.4
Psat5g163000 Pisum sativum HOM05D003890 ORTHO05D004514 2.2e-35 152.5 82 85.4
PGR119G1229 Punica granatum HOM05D003890 ORTHO05D004514 2.2e-35 152.5 96 72.9
TPR.G30124 Trifolium pratense HOM05D003890 ORTHO05D004514 2.2e-35 152.5 82 85.4
GSVIVG01025257001 Vitis vinifera HOM05D003890 ORTHO05D004514 2.2e-35 152.5 82 86.6
Aqoxy2G00137 Aquilegia oxysepala HOM05D003890 ORTHO05D004514 3.7e-35 151.8 82 85.4
Rhsim01G0191800 Rhododendron simsii HOM05D003890 ORTHO05D004514 4.8e-35 151.4 82 85.4
Actinidia16334 Actinidia chinensis HOM05D003890 ORTHO05D004514 6.3e-35 151.0 82 86.6
Eucgr.J00766 Eucalyptus grandis HOM05D003890 ORTHO05D004514 6.3e-35 151.0 96 72.9
Duzib170G0856 Durio zibethinus HOM05D003890 ORTHO05D004514 8.2e-35 150.6 78 84.6
CiPaw.14G119100 Carya illinoinensis HOM05D003890 ORTHO05D004514 1.4e-34 149.8 82 84.1
Cc10_g03220 Coffea canephora HOM05D003890 ORTHO05D004514 3.1e-34 148.7 98 72.4
Hund07506 Selenicereus undatus HOM05D003890 ORTHO05D004514 3.1e-34 148.7 81 84.0
CANSAT56G1539 Cannabis sativa HOM05D003890 ORTHO05D004514 4.1e-34 148.3 83 83.1
MBI04_g36752_MAGBIO Magnolia biondii HOM05D003890 ORTHO05D004514 4.1e-34 148.3 82 80.5
Lj6g0021955 Lotus japonicus HOM05D003890 ORTHO05D004514 5.3e-34 147.9 82 82.9
Gohir.D09G111000 Gossypium hirsutum HOM05D003890 ORTHO05D004514 6.9e-34 147.5 82 79.3
Gorai.006G128600 Gossypium raimondii HOM05D003890 ORTHO05D004514 6.9e-34 147.5 82 79.3
Cfa009770 Carpinus fangiana HOM05D003890 ORTHO05D004514 9.1e-34 147.1 82 84.1
RcHm_v2.0_Chr5g0052051 Rosa chinensis HOM05D003890 ORTHO05D004514 9.1e-34 147.1 82 81.7
AUR62019304 Chenopodium quinoa HOM05D003890 ORTHO05D004514 1.2e-33 146.7 82 80.5
FvH4_3g28850 Fragaria vesca HOM05D003890 ORTHO05D004514 1.5e-33 146.4 82 80.5
FAN16G3317 Fragaria x ananassa HOM05D003890 ORTHO05D004514 1.5e-33 146.4 82 80.5
FAN21G3604 Fragaria x ananassa HOM05D003890 ORTHO05D004514 1.5e-33 146.4 82 80.5
FAN25G3809 Fragaria x ananassa HOM05D003890 ORTHO05D004514 1.5e-33 146.4 82 80.5
Dinv09354 Davidia involucrata HOM05D003890 ORTHO05D004514 2.6e-33 145.6 76 84.2
Manes.14G002800 Manihot esculenta HOM05D003890 ORTHO05D004514 2.6e-33 145.6 84 83.3
TWI60G0796 Tripterygium wilfordii HOM05D003890 ORTHO05D004514 2.6e-33 145.6 82 81.7
Gohir.A09G114300 Gossypium hirsutum HOM05D003890 ORTHO05D004514 3.4e-33 145.2 82 78.0
ECA240G2592 Erigeron canadensis HOM05D003890 ORTHO05D004514 4.5e-33 144.8 100 69.0
ClCG03G013240 Citrullus lanatus HOM05D003890 ORTHO05D004514 5.9e-33 144.4 82 81.7
FAN11G0759 Fragaria x ananassa HOM05D003890 ORTHO05D004514 5.9e-33 144.4 82 79.3
Lsat_1_v5_gn_1_66000 Lactuca sativa HOM05D003890 ORTHO05D004514 5.9e-33 144.4 82 82.9
Nn2g15369 Nelumbo nucifera HOM05D003890 ORTHO05D004514 7.7e-33 144.1 77 85.7
Prupe.4G249500 Prunus persica HOM05D003890 ORTHO05D004514 7.7e-33 144.1 82 82.9
PSO384G2797 Papaver somniferum HOM05D003890 ORTHO05D004514 1.0e-32 143.7 82 80.5
THA.LOC104807531 Tarenaya hassleriana HOM05D003890 ORTHO05D004514 1.0e-32 143.7 82 76.8
AUR62000123 Chenopodium quinoa HOM05D003890 ORTHO05D004514 1.3e-32 143.3 78 80.8
CsaV3_1G042820 Cucumis sativus L. HOM05D003890 ORTHO05D004514 1.3e-32 143.3 82 80.5
Migut.D00602 Erythranthe guttata HOM05D003890 ORTHO05D004514 1.3e-32 143.3 98 68.4
Sed0005000 Sechium edule HOM05D003890 ORTHO05D004514 1.3e-32 143.3 74 90.5
arahy.Tifrunner.gnm1.ann1.13C5F2 Arachis hypogaea HOM05D003890 ORTHO05D004514 1.7e-32 142.9 82 79.3
Glyma.14G009900 Glycine max HOM05D003890 ORTHO05D004514 1.7e-32 142.9 82 79.3
Medtr3g061630 Medicago truncatula HOM05D003890 ORTHO05D004514 1.7e-32 142.9 82 79.3
Sed0019717 Sechium edule HOM05D003890 ORTHO05D004514 1.7e-32 142.9 82 79.3
Aa31LG4G8640 Aethionema arabicum HOM05D003890 ORTHO05D004514 2.2e-32 142.5 81 76.5
ATR0332G008 Amborella trichopoda HOM05D003890 ORTHO05D004514 2.9e-32 142.1 82 81.7
EL10Ac4g10247 Beta vulgaris HOM05D003890 ORTHO05D004514 2.9e-32 142.1 82 75.6
Lalb_Chr04g0247401 Lupinus albus HOM05D003890 ORTHO05D004514 2.9e-32 142.1 82 80.5
Lalb_Chr04g0247641 Lupinus albus HOM05D003890 ORTHO05D004514 2.9e-32 142.1 82 80.5
MD03G1175000 Malus domestica HOM05D003890 ORTHO05D004514 2.9e-32 142.1 82 81.7
MD11G1193100 Malus domestica HOM05D003890 ORTHO05D004514 2.9e-32 142.1 82 81.7
Oeu001480.1 Olea europaea HOM05D003890 ORTHO05D004514 2.9e-32 142.1 98 68.4
Manes.06G164200 Manihot esculenta HOM05D003890 ORTHO05D004514 3.8e-32 141.7 82 81.7
MELO3C014593.2 Cucumis melo HOM05D003890 ORTHO05D004514 5.0e-32 141.4 74 87.8
Thhalv10015929m.g Eutrema salsugineum HOM05D003890 ORTHO05D004514 5.0e-32 141.4 96 64.6
Ah.04g161930 Amaranthus hybridus HOM05D003890 ORTHO05D004514 8.5e-32 140.6 79 77.2
BcaB01g04844 Brassica carinata HOM05D003890 ORTHO05D004514 8.5e-32 140.6 82 74.4
Oeu016684.1 Olea europaea HOM05D003890 ORTHO05D004514 8.5e-32 140.6 94 70.2
ECA233G4357 Erigeron canadensis HOM05D003890 ORTHO05D004514 1.1e-31 140.2 76 84.2
Lalb_Chr18g0050551 Lupinus albus HOM05D003890 ORTHO05D004514 1.1e-31 140.2 75 86.7
Phvul.008G283400 Phaseolus vulgaris HOM05D003890 ORTHO05D004514 1.1e-31 140.2 77 81.8
BcaC03g13717 Brassica carinata HOM05D003890 ORTHO05D004514 1.4e-31 139.8 82 74.4
Lj1A330T24 Lonicera japonica HOM05D003890 ORTHO05D004514 1.4e-31 139.8 83 79.5
TWI32G0323 Tripterygium wilfordii HOM05D003890 ORTHO05D004514 1.4e-31 139.8 83 79.5
MBI02_g05665_MAGBIO Magnolia biondii HOM05D003890 ORTHO05D004514 1.9e-31 139.4 82 76.8
Hund22030 Selenicereus undatus HOM05D003890 ORTHO05D004514 1.9e-31 139.4 83 78.3
BcaB01g04825 Brassica carinata HOM05D003890 ORTHO05D004514 2.5e-31 139.0 82 73.2
BcaB08g36566 Brassica carinata HOM05D003890 ORTHO05D004514 2.5e-31 139.0 82 73.2
A03p09680 Brassica napus HOM05D003890 ORTHO05D004514 2.5e-31 139.0 82 73.2
C03p11250 Brassica napus HOM05D003890 ORTHO05D004514 2.5e-31 139.0 82 73.2
BolC3t13596H Brassica oleracea HOM05D003890 ORTHO05D004514 2.5e-31 139.0 82 73.2
AT5G19855 Arabidopsis thaliana HOM05D003890 ORTHO05D004514 3.2e-31 138.7 92 66.3
A02p05850 Brassica napus HOM05D003890 ORTHO05D004514 3.2e-31 138.7 82 73.2
BNapus_Darmor_BZH_scaffold_38p02060 Brassica napus HOM05D003890 ORTHO05D004514 3.2e-31 138.7 82 73.2
ClCG02G023230 Citrullus lanatus HOM05D003890 ORTHO05D004514 3.2e-31 138.7 74 86.5
CsaV3_4G024270 Cucumis sativus L. HOM05D003890 ORTHO05D004514 3.2e-31 138.7 74 86.5
Os03g0807900 Oryza sativa ssp. japonica HOM05D003890 ORTHO05D004514 3.2e-31 138.7 82 76.8
Zm00001eb212460 Zea mays HOM05D003890 ORTHO05D004514 3.2e-31 138.7 82 75.6
CDE02G1666 Ceratophyllum demersum HOM05D003890 ORTHO05D004514 5.5e-31 137.9 78 71.8
SGA_v2.0_scaffold8G04590 Striga asiatica HOM05D003890 ORTHO05D004514 5.5e-31 137.9 82 76.8
Peaxi162Scf00004g02340 Petunia axillaris HOM05D003890 ORTHO05D004514 1.2e-30 136.7 82 76.8
AL6G31380 Arabidopsis lyrata HOM05D003890 ORTHO05D004514 2.1e-30 136.0 89 66.3
DCAR_003214 Daucus carota HOM05D003890 ORTHO05D004514 2.1e-30 136.0 76 77.6
Lsat_1_v5_gn_6_47921 Lactuca sativa HOM05D003890 ORTHO05D004514 2.1e-30 136.0 76 80.3
MSTRG.21378 Avicennia marina HOM05D003890 ORTHO05D004514 3.6e-30 135.2 98 67.3
Lsat_1_v5_gn_4_31621 Lactuca sativa HOM05D003890 ORTHO05D004514 3.6e-30 135.2 77 75.3
THA.LOC104811066 Tarenaya hassleriana HOM05D003890 ORTHO05D004514 3.6e-30 135.2 80 76.2
VMungo0647G1030 Vigna mungo HOM05D003890 ORTHO05D004514 6.1e-30 134.4 77 76.6
Carub.0006s1821 Capsella rubella HOM05D003890 ORTHO05D004514 7.9e-30 134.0 89 66.3
HanXRQChr02g0056201 Helianthus annuus HOM05D003890 ORTHO05D004514 1.0e-29 133.7 76 77.6
MBI04_g40116_MAGBIO Magnolia biondii HOM05D003890 ORTHO05D004514 1.0e-29 133.7 94 68.1
Solyc11g065740.2 Solanum lycopersicum HOM05D003890 ORTHO05D004514 1.0e-29 133.7 77 77.9
Sopen11g025500 Solanum pennellii HOM05D003890 ORTHO05D004514 1.0e-29 133.7 77 77.9
Cc02_g28010 Coffea canephora HOM05D003890 ORTHO05D004514 3.9e-29 131.7 78 74.4
HanXRQChr16g0524491 Helianthus annuus HOM05D003890 ORTHO05D004514 3.9e-29 131.7 77 72.7
BolC2t06986H Brassica oleracea HOM05D003890 ORTHO05D004514 5.1e-29 131.3 93 65.6
CAN.G599.2 Capsicum annuum HOM05D003890 ORTHO05D004514 5.1e-29 131.3 76 77.6
PGSC0003DMG400007341 Solanum tuberosum HOM05D003890 ORTHO05D004514 5.1e-29 131.3 77 76.6
CARHR193020 Cardamine hirsuta HOM05D003890 ORTHO05D004514 6.7e-29 131.0 76 73.7
Migut.N02317 Erythranthe guttata HOM05D003890 ORTHO05D004514 6.7e-29 131.0 82 75.6
Nitab4.5_0001587g0060 Nicotiana tabacum HOM05D003890 ORTHO05D004514 6.7e-29 131.0 82 74.4
Nitab4.5_0002741g0130 Nicotiana tabacum HOM05D003890 ORTHO05D004514 6.7e-29 131.0 82 74.4
BraA03t10284Z Brassica rapa HOM05D003890 ORTHO05D004514 2.0e-28 129.4 96 62.5
unitig_8.g2995 Utricularia gibba HOM05D003890 ORTHO05D004514 2.0e-28 129.4 95 66.3
Ah.06g194180 Amaranthus hybridus HOM05D003890 ORTHO05D004514 2.6e-28 129.0 111 58.6
MSTRG.18426 Avicennia marina HOM05D003890 ORTHO05D004514 4.4e-28 128.3 74 79.7
unitig_22.g6202 Utricularia gibba HOM05D003890 ORTHO05D004514 5.7e-28 127.9 90 67.8
BraA02t05537Z Brassica rapa HOM05D003890 ORTHO05D004514 2.2e-27 125.9 91 63.7
Os07g0569600 Oryza sativa ssp. japonica HOM05D003890 ORTHO05D004514 1.4e-26 123.2 77 67.5
BcaC04g19383 Brassica carinata HOM05D003890 ORTHO05D004514 5.3e-26 121.3 79 67.1
Zm00001eb324740 Zea mays HOM05D003890 ORTHO05D004514 7.0e-26 120.9 76 64.5
MSTRG.17029 Avicennia marina HOM05D003890 ORTHO05D004514 1.2e-25 120.2 77 68.8
SGA_v2.0_scaffold3G01504 Striga asiatica HOM05D003890 ORTHO05D004514 4.5e-25 118.2 76 71.1
HPP92_024873 Vanilla planifolia HOM05D003890 ORTHO05D004514 1.0e-24 117.1 97 58.8
arahy.Tifrunner.gnm1.ann1.V44IJD Arachis hypogaea HOM05D003890 ORTHO05D004514 2.2e-24 115.9 69 75.4
SalBow6G3376 Salvia bowleyana HOM05D003890 ORTHO05D004514 2.2e-24 115.9 76 67.1
SalBow6G5214 Salvia bowleyana HOM05D003890 ORTHO05D004514 2.2e-24 115.9 76 67.1
A10p19900 Brassica napus HOM05D003890 ORTHO05D004514 1.1e-23 113.6 103 53.4
HanXRQChr01g0018191 Helianthus annuus HOM05D003890 ORTHO05D004514 1.5e-23 113.2 77 64.9
SEGI_02367 Sequoiadendron giganteum HOM05D003890 ORTHO05D004514 1.9e-23 112.8 76 63.2
Sp6g24540 Schrenkiella parvula HOM05D003890 ORTHO05D004514 2.5e-23 112.5 63 76.2
C09p56300 Brassica napus HOM05D003890 ORTHO05D004514 4.2e-23 111.7 93 57.0
BolC9t58499H Brassica oleracea HOM05D003890 ORTHO05D004514 4.2e-23 111.7 93 57.0
MSTRG.28066 Avicennia marina HOM05D003890 ORTHO05D004514 9.4e-23 110.5 85 57.6
Sopen01g034250 Solanum pennellii HOM05D003890 ORTHO05D004514 1.6e-22 109.8 74 64.9
Peaxi162Scf00953g00113 Petunia axillaris HOM05D003890 ORTHO05D004514 3.6e-22 108.6 74 66.2
Solyc01g087190.4 Solanum lycopersicum HOM05D003890 ORTHO05D004514 4.7e-22 108.2 74 63.5
SMO275G0040 Selaginella moellendorffii HOM05D003890 ORTHO05D004514 6.1e-22 107.8 73 69.9
Pp3c12_1270 Physcomitrium patens HOM05D003890 ORTHO05D004514 2.3e-21 105.9 76 65.8
CAN.G1560.2 Capsicum annuum HOM05D003890 ORTHO05D004514 3.0e-21 105.5 74 60.8
Pp3c9_10480 Physcomitrium patens HOM05D003890 ORTHO05D004514 6.7e-21 104.4 76 64.5
Nitab4.5_0001186g0010 Nicotiana tabacum HOM05D003890 ORTHO05D004514 8.8e-21 104.0 74 62.2
Nitab4.5_0004290g0020 Nicotiana tabacum HOM05D003890 ORTHO05D004514 8.8e-21 104.0 74 62.2
Mapoly0069s0007 Marchantia polymorpha HOM05D003890 ORTHO05D004514 1.5e-20 103.2 76 60.5
PGSC0003DMG400006801 Solanum tuberosum HOM05D003890 ORTHO05D004514 4.4e-20 101.7 80 58.8
AagrBONN_evm.TU.Sc2ySwM_228.2147 Anthoceros agrestis HOM05D003890 ORTHO05D004514 2.2e-19 99.4 73 61.6
Mapoly0002s0228 Marchantia polymorpha HOM05D003890 ORTHO05D004514 2.8e-19 99.0 90 53.3
arahy.Tifrunner.gnm1.ann1.11Y6U0 Arachis hypogaea HOM05D003890 ORTHO05D004514 3.1e-18 95.5 54 77.8
BraA10t44065Z Brassica rapa HOM05D003890 ORTHO05D004514 3.1e-18 95.5 54 72.2
BcaC04g19382 Brassica carinata HOM05D000916 ORTHO05D008653 2.6e-17 92.4 76 56.6
Nn7g36206 Nelumbo nucifera HOM05D003890 ORTHO05D004514 2.6e-17 92.4 77 62.3
CBR_g21098 Chara braunii HOM05D003890 ORTHO05D004514 1.3e-16 90.1 82 51.2
Eucgr.B03687 Eucalyptus grandis HOM05D003890 ORTHO05D004514 1.2e-14 83.6 41 90.2
MELO3C015193.2 Cucumis melo HOM05D003890 ORTHO05D004514 3.7e-11 72.0 41 80.5


User provided reference genes

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