Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0039549 Camellia sinensis var. sinensis HOM05D006334 ORTHO05D008320 2.3e-136 489.2 298 100.0
Dinv22296 Davidia involucrata HOM05D006334 ORTHO05D008320 4.2e-98 362.1 299 74.9
RcHm_v2.0_Chr5g0037801 Rosa chinensis HOM05D006334 ORTHO05D008320 1.0e-91 340.9 303 73.3
Potri.001G418900 Populus trichocarpa HOM05D006334 ORTHO05D008320 1.9e-90 336.7 301 65.8
FAN11G3716 Fragaria x ananassa HOM05D006334 ORTHO05D008320 4.2e-90 335.5 301 71.8
FvH4_3g21950 Fragaria vesca HOM05D006334 ORTHO05D008320 9.3e-90 334.3 301 70.1
FAN25G1013 Fragaria x ananassa HOM05D006334 ORTHO05D008320 2.1e-89 333.2 301 73.8
MD03G1210000 Malus domestica HOM05D006334 ORTHO05D008320 3.5e-89 332.4 301 73.4
MD11G1224700 Malus domestica HOM05D006334 ORTHO05D008320 4.6e-89 332.0 301 77.1
RhsimUnG0252800 Rhododendron simsii HOM05D006334 ORTHO05D008320 3.3e-87 325.9 411 56.0
CiPaw.12G127100 Carya illinoinensis HOM05D006334 ORTHO05D008320 5.7e-87 325.1 301 68.8
DCAR_022532 Daucus carota HOM05D006334 ORTHO05D008320 7.4e-87 324.7 306 67.3
HanXRQChr11g0337741 Helianthus annuus HOM05D006334 ORTHO05D008320 7.4e-87 324.7 292 75.0
Haze_09629 Corylus avellana HOM05D006334 ORTHO05D008320 6.3e-86 321.6 300 70.3
Prupe.4G205200 Prunus persica HOM05D006334 ORTHO05D008320 1.1e-85 320.9 301 70.4
Lsat_1_v5_gn_7_109541 Lactuca sativa HOM05D006334 ORTHO05D008320 7.6e-84 314.7 302 66.9
Lj8A166G85 Lonicera japonica HOM05D006334 ORTHO05D008320 1.3e-83 313.9 314 70.1
Ah.04g165560 Amaranthus hybridus HOM05D006334 ORTHO05D008320 1.7e-83 313.5 298 67.4
Haze_24344 Corylus avellana HOM05D003220 ORTHO05D003944 2.2e-83 313.2 298 70.1
Manes.03G123900 Manihot esculenta HOM05D006334 ORTHO05D008320 2.9e-83 312.8 299 70.9
ECA236G0521 Erigeron canadensis HOM05D006334 ORTHO05D008320 1.9e-82 310.1 299 69.9
vmacro09744 Vaccinium macrocarpon HOM05D006334 ORTHO05D008320 4.2e-82 308.9 299 69.6
PSO210G7302 Papaver somniferum HOM05D006334 ORTHO05D008320 9.3e-82 307.8 299 67.9
Cfa020403 Carpinus fangiana HOM05D001306 ORTHO05D001159 2.1e-81 306.6 294 66.7
GSVIVG01001978001 Vitis vinifera HOM05D006334 ORTHO05D008320 2.7e-81 306.2 301 68.4
Atru.chr2.3229 Acer truncatum HOM05D006334 ORTHO05D008320 1.3e-80 303.9 301 66.4
AUR62020535 Chenopodium quinoa HOM05D006334 ORTHO05D008320 3.0e-80 302.8 300 65.7
CAN.G1110.6 Capsicum annuum HOM05D006334 ORTHO05D008320 7.4e-79 298.1 300 68.3
MBI02_g23962_MAGBIO Magnolia biondii HOM05D006334 ORTHO05D008320 7.4e-79 298.1 299 68.6
Nitab4.5_0002229g0170 Nicotiana tabacum HOM05D006334 ORTHO05D008320 1.3e-78 297.4 300 65.7
PSO832G3755 Papaver somniferum HOM05D006334 ORTHO05D008320 2.2e-78 296.6 302 65.9
ClCG05G014700 Citrullus lanatus HOM05D006334 ORTHO05D008320 4.1e-77 292.4 301 64.8
AUR62015668 Chenopodium quinoa HOM05D006334 ORTHO05D008320 5.3e-77 292.0 300 62.0
QL08p012879 Quercus lobata HOM05D006334 ORTHO05D008320 5.3e-77 292.0 299 63.5
Sabra16G0284400 Salix brachista HOM05D006334 ORTHO05D008320 1.0e-75 287.7 301 61.8
Nitab4.5_0002342g0070 Nicotiana tabacum HOM05D006334 ORTHO05D008320 1.3e-75 287.3 301 65.1
Peaxi162Scf00450g00858 Petunia axillaris HOM05D006334 ORTHO05D008320 1.7e-75 287.0 314 66.9
TAR629G3436 Trochodendron aralioides HOM05D006334 ORTHO05D008320 1.7e-75 287.0 301 69.1
Hund23297 Selenicereus undatus HOM05D006334 ORTHO05D008320 2.9e-75 286.2 302 64.6
Ciclev10009059m.g Citrus clementina HOM05D006334 ORTHO05D008320 1.9e-74 283.5 301 65.8
TWI38G1766 Tripterygium wilfordii HOM05D006334 ORTHO05D008320 3.6e-73 279.3 302 61.9
AUR62005409 Chenopodium quinoa HOM05D006334 ORTHO05D008320 1.0e-72 277.7 299 63.2
Nn1g07058 Nelumbo nucifera HOM05D006334 ORTHO05D008320 1.0e-72 277.7 298 67.8
Peaxi162Scf00407g00312 Petunia axillaris HOM05D006334 ORTHO05D008320 3.0e-72 276.2 298 64.4
Eucgr.F03434 Eucalyptus grandis HOM05D006334 ORTHO05D008320 3.9e-72 275.8 299 62.2
Sc07g0002760 Simmondsia chinensis HOM05D006334 ORTHO05D008320 8.8e-72 274.6 301 62.5
QL08p012752 Quercus lobata HOM05D006334 ORTHO05D008320 4.3e-71 272.3 184 81.5
Aqoxy1G03666 Aquilegia oxysepala HOM05D006334 ORTHO05D008320 5.7e-71 271.9 228 72.4
Thecc.07G050800 Theobroma cacao HOM05D006334 ORTHO05D008320 7.4e-71 271.6 304 67.1
CDE05G3377 Ceratophyllum demersum HOM05D006334 ORTHO05D008320 1.7e-70 270.4 300 57.0
COL.COLO4_09585 Corchorus olitorius HOM05D006334 ORTHO05D008320 1.7e-70 270.4 301 63.8
Phvul.005G092400 Phaseolus vulgaris HOM05D006334 ORTHO05D008320 1.7e-70 270.4 297 61.6
arahy.Tifrunner.gnm1.ann1.9AY9GA Arachis hypogaea HOM05D006334 ORTHO05D008320 4.8e-70 268.9 299 60.9
Solyc10g006460.3 Solanum lycopersicum HOM05D006334 ORTHO05D008320 6.3e-70 268.5 293 63.1
Gorai.002G083500 Gossypium raimondii HOM05D006334 ORTHO05D008320 8.2e-70 268.1 302 65.9
arahy.Tifrunner.gnm1.ann1.Q0MPW2 Arachis hypogaea HOM05D006334 ORTHO05D008320 1.4e-69 267.3 299 60.5
CsaV3_3G023200 Cucumis sativus L. HOM05D006334 ORTHO05D008320 1.4e-69 267.3 301 63.1
CsaV3_UNG104770 Cucumis sativus L. HOM05D006334 ORTHO05D008320 1.4e-69 267.3 301 63.1
Duzib268G1565 Durio zibethinus HOM05D006334 ORTHO05D008320 2.4e-69 266.5 304 65.8
FAN21G3458 Fragaria x ananassa HOM05D006334 ORTHO05D008320 2.4e-69 266.5 309 63.4
MELO3C018091.2 Cucumis melo HOM05D006334 ORTHO05D008320 3.1e-69 266.2 301 62.8
Gohir.D01G062800 Gossypium hirsutum HOM05D006334 ORTHO05D008320 4.1e-69 265.8 302 63.6
PGSC0003DMG400014399 Solanum tuberosum HOM05D006334 ORTHO05D008320 2.6e-68 263.1 297 66.0
THA.LOC104812531 Tarenaya hassleriana HOM05D006334 ORTHO05D008320 1.3e-67 260.8 298 62.8
Cc05_g13330 Coffea canephora HOM05D006334 ORTHO05D008320 2.9e-67 259.6 301 61.5
Gohir.A01G075500 Gossypium hirsutum HOM05D006334 ORTHO05D008320 2.9e-67 259.6 302 62.3
Psat5g251960 Pisum sativum HOM05D006334 ORTHO05D008320 3.8e-67 259.2 297 61.3
CARHR234770 Cardamine hirsuta HOM05D006334 ORTHO05D008320 2.1e-65 253.4 307 62.2
AL7G25680 Arabidopsis lyrata HOM05D006334 ORTHO05D008320 7.9e-65 251.5 307 61.2
Sopen10g002410 Solanum pennellii HOM05D006334 ORTHO05D008320 1.8e-64 250.4 136 89.0
SGA_v2.0_scaffold101G29789 Striga asiatica HOM05D006334 ORTHO05D008320 1.5e-63 247.3 142 85.2
Aa31LG5G10300 Aethionema arabicum HOM05D006334 ORTHO05D008320 2.0e-63 246.9 301 59.5
Lj3g0002745 Lotus japonicus HOM05D006334 ORTHO05D008320 3.3e-63 246.1 300 57.0
MSTRG.27096 Avicennia marina HOM05D006334 ORTHO05D008320 1.3e-62 244.2 302 59.6
Zm00001eb298180 Zea mays HOM05D006334 ORTHO05D008320 4.8e-62 242.3 173 73.4
EL10Ac4g07940 Beta vulgaris HOM05D006334 ORTHO05D008320 6.3e-62 241.9 314 59.2
PGR031G1291 Punica granatum HOM05D006334 ORTHO05D008320 6.3e-62 241.9 306 59.2
Migut.M01801 Erythranthe guttata HOM05D006334 ORTHO05D008320 2.4e-61 240.0 305 60.0
Medtr2g083200 Medicago truncatula HOM05D006334 ORTHO05D008320 9.1e-61 238.0 295 56.3
Carub.0007s1372 Capsella rubella HOM05D006334 ORTHO05D008320 4.5e-60 235.7 302 60.6
AT4G27120 Arabidopsis thaliana HOM05D006334 ORTHO05D008320 5.9e-60 235.3 303 59.4
unitig_748.g7233 Utricularia gibba HOM05D006334 ORTHO05D008320 1.9e-58 230.3 299 54.2
Thhalv10025846m.g Eutrema salsugineum HOM05D006334 ORTHO05D008320 7.2e-58 228.4 302 59.6
Ca_01740_v3 Cicer arietinum L. HOM05D006334 ORTHO05D008320 3.6e-57 226.1 297 54.5
Sp7g25090 Schrenkiella parvula HOM05D006334 ORTHO05D008320 6.1e-57 225.3 302 59.6
VMungo1080G0184 Vigna mungo HOM05D006334 ORTHO05D008320 1.0e-56 224.6 297 54.9
Glyma.13G288200 Glycine max HOM05D006334 ORTHO05D008320 2.3e-56 223.4 298 57.7
Glyma.12G213500 Glycine max HOM05D006334 ORTHO05D008320 6.7e-56 221.9 137 81.0
Os07g0103200 Oryza sativa ssp. japonica HOM05D006334 ORTHO05D008320 8.8e-56 221.5 298 54.4
Actinidia35324 Actinidia chinensis HOM05D006334 ORTHO05D008320 1.1e-55 221.1 134 88.8
BcaNung03057 Brassica carinata HOM05D006334 ORTHO05D008320 1.1e-55 221.1 142 78.9
BraA01t01781Z Brassica rapa HOM05D006334 ORTHO05D008320 2.0e-55 220.3 142 78.9
Sed0009538 Sechium edule HOM05D006334 ORTHO05D008320 2.0e-55 220.3 291 61.2
TPR.G19971 Trifolium pratense HOM05D006334 ORTHO05D008320 2.0e-55 220.3 136 79.4
HPP92_014117 Vanilla planifolia HOM05D006334 ORTHO05D008320 5.7e-55 218.8 288 58.3
A03p57090 Brassica napus HOM05D006334 ORTHO05D008320 9.7e-55 218.0 144 79.2
BraA03t14779Z Brassica rapa HOM05D006334 ORTHO05D008320 9.7e-55 218.0 144 79.2
BolC1t02259H Brassica oleracea HOM05D006334 ORTHO05D008320 2.2e-54 216.9 142 78.2
C01p23260 Brassica napus HOM05D006334 ORTHO05D008320 4.8e-54 215.7 142 77.5
Carub.0008s0614 Capsella rubella HOM05D006334 ORTHO05D008320 1.1e-53 214.5 309 57.9
BcaC06g32710 Brassica carinata HOM05D006334 ORTHO05D008320 1.8e-53 213.8 143 76.9
C07p54970 Brassica napus HOM05D006334 ORTHO05D008320 1.8e-53 213.8 143 76.9
BolC7t46013H Brassica oleracea HOM05D006334 ORTHO05D001501 4.1e-53 212.6 135 79.3
Lalb_Chr24g0400251 Lupinus albus HOM05D006334 ORTHO05D008320 4.1e-53 212.6 297 57.9
A01p18260 Brassica napus HOM05D006334 ORTHO05D008320 2.7e-52 209.9 123 83.7
SEGI_34639 Sequoiadendron giganteum HOM05D006334 ORTHO05D008320 6.5e-51 205.3 166 69.9
Pp3c20_19360 Physcomitrium patens HOM05D006334 ORTHO05D008320 4.0e-48 196.1 178 63.5
Mapoly0114s0022 Marchantia polymorpha HOM05D006334 ORTHO05D008320 2.0e-47 193.7 291 48.1
Actinidia10714 Actinidia chinensis HOM05D006334 ORTHO05D008320 3.7e-46 189.5 108 87.0
SMO143G0307 Selaginella moellendorffii HOM05D006334 ORTHO05D008320 7.0e-45 185.3 130 72.3
AagrBONN_evm.TU.Sc2ySwM_228.581 Anthoceros agrestis HOM05D006334 ORTHO05D008320 1.9e-42 177.2 168 63.7
AagrBONN_evm.TU.Sc2ySwM_368.826 Anthoceros agrestis HOM05D006334 ORTHO05D008320 4.7e-41 172.6 168 61.3
ATR0697G296 Amborella trichopoda HOM05D006334 ORTHO05D008320 2.6e-39 166.8 220 54.1
CBR_g8852 Chara braunii HOM05D006334 ORTHO05D008320 3.4e-39 166.4 168 57.1
FAN16G3226 Fragaria x ananassa HOM05D006334 ORTHO05D008320 4.9e-38 162.5 201 66.7
Oeu032444.1 Olea europaea HOM05D006334 ORTHO05D008320 2.7e-36 156.8 106 82.1
Cpa.g.sc97.55 Carica papaya HOM05D006334 ORTHO05D008320 1.4e-29 134.4 202 57.4
Cre02.g101100 Chlamydomonas reinhardtii HOM05D006334 ORTHO05D008320 4.3e-26 122.9 162 45.7
FAN16G1435 Fragaria x ananassa HOM05D006334 ORTHO05D008320 4.3e-26 122.9 70 90.0
Cpa.g.sc97.53 Carica papaya HOM05D006334 ORTHO05D008320 6.8e-24 115.5 70 82.9
Actinidia35323 Actinidia chinensis HOM05D006334 ORTHO05D030819 1.2e-20 104.8 86 68.6
Haze_27349 Corylus avellana HOM05D006334 ORTHO05D008320 4.6e-20 102.8 167 39.5
Actinidia10713 Actinidia chinensis HOM05D006334 ORTHO05D030819 1.6e-17 94.4 86 67.4
BcaC09g50615 Brassica carinata HOM05D006334 ORTHO05D008320 3.4e-15 86.7 225 49.8


User provided reference genes

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