Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0039488 Camellia sinensis var. sinensis HOM05D013097 ORTHO05D010819 3.1e-81 305.8 258 100.0
CSS0031242 Camellia sinensis var. sinensis HOM05D013097 ORTHO05D010819 3.5e-69 265.8 258 93.4
CSS0048626 Camellia sinensis var. sinensis HOM05D013097 ORTHO05D010819 4.2e-38 162.5 258 67.1
ECA238G0402 Erigeron canadensis HOM05D013097 ORTHO05D010819 6.1e-13 79.0 77 61.0
Ciclev10026322m.g Citrus clementina HOM05D008801 ORTHO05D010819 1.5e-11 74.3 66 60.6
Glyma.01G190900 Glycine max HOM05D008801 ORTHO05D010819 1.7e-10 70.9 75 52.0
Ca_24714_v3 Cicer arietinum L. HOM05D008801 ORTHO05D010819 6.3e-10 68.9 77 58.4
Ca_24729_v3 Cicer arietinum L. HOM05D008801 ORTHO05D010819 6.3e-10 68.9 77 58.4
Glyma.11G051300 Glycine max HOM05D008801 ORTHO05D010819 1.1e-09 68.2 75 50.7
Carub.0007s0283 Capsella rubella HOM05D010159 ORTHO05D012416 4.1e-09 66.2 69 55.1
Phvul.002G014100 Phaseolus vulgaris HOM05D008801 ORTHO05D010819 1.6e-08 64.3 75 46.7
VMungo1215G0318 Vigna mungo HOM05D008801 ORTHO05D010819 4.5e-08 62.8 75 46.7
arahy.Tifrunner.gnm1.ann1.N2JMJ4 Arachis hypogaea HOM05D008801 ORTHO05D010819 1.0e-07 61.6 76 47.4
Glyma.05G102100 Glycine max HOM05D008801 ORTHO05D010819 1.0e-07 61.6 75 54.7
Gohir.A11G218200 Gossypium hirsutum HOM05D008801 ORTHO05D010819 1.0e-07 61.6 69 55.1
AT4G37450 Arabidopsis thaliana HOM05D010159 ORTHO05D012416 1.3e-07 61.2 77 49.4
CiPaw.02G005000 Carya illinoinensis HOM05D013097 ORTHO05D010819 1.3e-07 61.2 53 54.7
TPR.G26876 Trifolium pratense HOM05D008801 ORTHO05D010819 1.7e-07 60.8 76 48.7
Phvul.003G238200 Phaseolus vulgaris HOM05D008801 ORTHO05D010819 2.9e-07 60.1 58 53.4
THA.LOC104807612 Tarenaya hassleriana HOM05D008801 ORTHO05D010819 2.9e-07 60.1 77 49.4
TWI53G1246 Tripterygium wilfordii HOM05D013097 ORTHO05D010819 2.9e-07 60.1 75 57.3
AT2G23130 Arabidopsis thaliana HOM05D010159 ORTHO05D016615 5.0e-07 59.3 75 52.0
MELO3C007601.2 Cucumis melo HOM05D022074 ORTHO05D028887 5.0e-07 59.3 66 56.1
Dinv30057 Davidia involucrata HOM05D013097 ORTHO05D026344 6.5e-07 58.9 73 53.4
Aa31LG6G14310 Aethionema arabicum HOM05D010159 ORTHO05D012416 8.5e-07 58.5 75 50.7
Cc07_g06680 Coffea canephora HOM05D013097 ORTHO05D023795 8.5e-07 58.5 273 45.1
Duzib187G0657 Durio zibethinus HOM05D008801 ORTHO05D010819 1.5e-06 57.8 58 53.4
arahy.Tifrunner.gnm1.ann1.EBVI20 Arachis hypogaea HOM05D008801 ORTHO05D010819 1.9e-06 57.4 79 44.3
Hund13925 Selenicereus undatus HOM05D017711 ORTHO05D021203 5.5e-06 55.8 51 52.9
Thecc.01G067400 Theobroma cacao HOM05D008801 ORTHO05D010819 5.5e-06 55.8 57 52.6
Nitab4.5_0005127g0010 Nicotiana tabacum HOM05D013097 ORTHO05D010819 9.4e-06 55.1 58 50.0


User provided reference genes

Program Settings