Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0039429 Camellia sinensis var. sinensis HOM05D037602 ORTHO05D033921 2.6e-53 211.8 109 100.0
CSS0030533 Camellia sinensis var. sinensis HOM05D037602 ORTHO05D033921 6.7e-46 187.2 109 90.8
CSS0027374 Camellia sinensis var. sinensis HOM05D037602 ORTHO05D033921 5.7e-45 184.1 109 89.9
Actinidia01264 Actinidia chinensis HOM05D007238 ORTHO05D009206 1.2e-21 106.7 75 76.0
Hma1.2p1_0544F.1_g175540 Hydrangea macrophylla HOM05D007238 ORTHO05D009206 1.8e-19 99.4 74 74.3
Lj8C334G11 Lonicera japonica HOM05D007238 ORTHO05D009206 2.7e-18 95.5 83 65.1
Dinv22874 Davidia involucrata HOM05D007238 ORTHO05D009206 1.3e-17 93.2 75 70.7
Dinv28012 Davidia involucrata HOM05D007238 ORTHO05D009206 1.7e-17 92.8 63 81.0
Thecc.03G317700 Theobroma cacao HOM05D007238 ORTHO05D009206 3.7e-12 75.1 75 57.3
Atru.chr6.1480 Acer truncatum HOM05D007238 ORTHO05D009206 1.1e-11 73.6 91 53.8
Potri.003G103100 Populus trichocarpa HOM05D007238 ORTHO05D009206 1.9e-11 72.8 74 55.4
Prupe.5G020000 Prunus persica HOM05D007238 ORTHO05D009206 2.4e-11 72.4 75 54.7
Actinidia32774 Actinidia chinensis HOM05D007238 ORTHO05D009206 4.1e-11 71.6 66 62.1
TAR629G0677 Trochodendron aralioides HOM05D007238 ORTHO05D009206 3.5e-10 68.6 74 54.1
DCAR_008182 Daucus carota HOM05D007238 ORTHO05D009206 6.6e-09 64.3 70 54.3
Aqoxy3G02024 Aquilegia oxysepala HOM05D007238 ORTHO05D009206 8.6e-09 63.9 63 58.7
Gohir.A12G202500 Gossypium hirsutum HOM05D007238 ORTHO05D009206 1.5e-08 63.2 86 50.0
Gohir.D12G205200 Gossypium hirsutum HOM05D007238 ORTHO05D009206 1.5e-08 63.2 86 50.0
Gorai.008G220100 Gossypium raimondii HOM05D007238 ORTHO05D009206 1.5e-08 63.2 86 50.0
Haze_08066 Corylus avellana HOM05D007238 ORTHO05D009206 7.3e-08 60.8 73 50.7
HanXRQChr03g0081381 Helianthus annuus HOM05D007238 ORTHO05D009206 1.6e-07 59.7 73 43.8
TWI36G0279 Tripterygium wilfordii HOM05D007238 ORTHO05D009206 1.1e-06 57.0 60 56.7
CSS0038403 Camellia sinensis var. sinensis HOM05D007238 ORTHO05D009206 1.4e-06 56.6 32 84.4
Sabra03G0070300 Salix brachista HOM05D007238 ORTHO05D009206 1.8e-06 56.2 74 44.6
GSVIVG01022787001 Vitis vinifera HOM05D007238 ORTHO05D009206 1.8e-06 56.2 31 87.1


User provided reference genes

Program Settings