Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0039366 Camellia sinensis var. sinensis HOM05D007673 ORTHO05D009278 1.6e-74 282.7 147 100.0
Dinv41432 Davidia involucrata HOM05D007673 ORTHO05D009278 3.7e-39 165.2 157 62.4
Actinidia04238 Actinidia chinensis HOM05D007673 ORTHO05D009278 1.1e-35 153.7 150 64.0
Actinidia21918 Actinidia chinensis HOM05D007673 ORTHO05D009278 8.0e-34 147.5 150 60.7
TAR383G0338 Trochodendron aralioides HOM05D007673 ORTHO05D009278 3.3e-32 142.1 159 50.9
TAR625G1436 Trochodendron aralioides HOM05D007673 ORTHO05D009278 3.7e-31 138.7 158 53.8
Dinv43178 Davidia involucrata HOM05D007673 ORTHO05D009278 4.4e-24 115.2 156 48.1
Rhsim01G0051900 Rhododendron simsii HOM05D007673 ORTHO05D009278 1.4e-22 110.2 188 43.6
Sabra06G0043300 Salix brachista HOM05D007673 ORTHO05D009278 1.8e-22 109.8 163 45.4
Potri.006G060000 Populus trichocarpa HOM05D007673 ORTHO05D009278 7.7e-21 104.4 160 43.8
Nn2g12220 Nelumbo nucifera HOM05D007673 ORTHO05D009278 1.5e-19 100.1 161 46.6
PGSC0003DMG400030693 Solanum tuberosum HOM05D007673 ORTHO05D009278 1.5e-19 100.1 151 46.4
GSVIVG01012874001 Vitis vinifera HOM05D007673 ORTHO05D009278 3.3e-19 99.0 162 44.4
Manes.06G043400 Manihot esculenta HOM05D007673 ORTHO05D009278 4.2e-19 98.6 161 43.5
Thecc.09G139900 Theobroma cacao HOM05D007673 ORTHO05D009278 9.5e-19 97.4 157 43.9
Aqoxy7G03558 Aquilegia oxysepala HOM05D007673 ORTHO05D009278 2.8e-18 95.9 167 44.3
MBI14_g03622_MAGBIO Magnolia biondii HOM05D007673 ORTHO05D009278 2.8e-18 95.9 158 44.3
CiPaw.15G183400 Carya illinoinensis HOM05D007673 ORTHO05D009278 4.7e-18 95.1 164 40.9
Solyc07g007270.3 Solanum lycopersicum HOM05D007673 ORTHO05D009278 1.8e-17 93.2 151 44.4
Sopen07g003330 Solanum pennellii HOM05D007673 ORTHO05D009278 2.6e-16 89.4 151 43.0
COL.COLO4_24126 Corchorus olitorius HOM05D007673 ORTHO05D009278 5.7e-16 88.2 163 43.6
QL02p091069 Quercus lobata HOM05D007673 ORTHO05D009278 5.7e-16 88.2 160 40.6
Cc06_g07510 Coffea canephora HOM05D007673 ORTHO05D009278 7.5e-16 87.8 167 40.1
Lalb_Chr13g0301271 Lupinus albus HOM05D007673 ORTHO05D009278 9.8e-16 87.4 164 42.7
Nn8g39681 Nelumbo nucifera HOM05D007673 ORTHO05D009278 9.8e-16 87.4 157 43.3
Glyma.13G165000 Glycine max HOM05D007673 ORTHO05D009278 1.1e-14 84.0 160 40.0
Lj6g0015094 Lotus japonicus HOM05D007673 ORTHO05D009278 1.8e-14 83.2 160 38.8
Manes.14G120200 Manihot esculenta HOM05D007673 ORTHO05D009278 7.0e-14 81.3 161 39.1
Peaxi162Scf00088g00016 Petunia axillaris HOM05D007673 ORTHO05D009278 7.0e-14 81.3 159 37.7
Lalb_Chr07g0179441 Lupinus albus HOM05D007673 ORTHO05D009278 1.2e-13 80.5 162 38.3
CAN.G877.9 Capsicum annuum HOM05D007673 ORTHO05D009278 1.6e-13 80.1 151 41.7
Nitab4.5_0003305g0020 Nicotiana tabacum HOM05D007673 ORTHO05D009278 1.6e-13 80.1 46 78.3
Potri.018G115601 Populus trichocarpa HOM05D007673 ORTHO05D009278 1.6e-13 80.1 160 37.5
Oeu051709.1 Olea europaea HOM05D007673 ORTHO05D009278 2.0e-13 79.7 151 39.1
Prupe.7G256100 Prunus persica HOM05D007673 ORTHO05D009278 4.5e-13 78.6 173 38.7
MD15G1160900 Malus domestica HOM05D007673 ORTHO05D009278 7.8e-13 77.8 154 37.7
Oeu055924.1 Olea europaea HOM05D007673 ORTHO05D009278 7.8e-13 77.8 155 39.4
DCAR_014921 Daucus carota HOM05D007673 ORTHO05D009278 1.3e-12 77.0 79 54.4
CiPaw.16G118400 Carya illinoinensis HOM05D007673 ORTHO05D009278 1.7e-12 76.6 170 40.6
TWI32G1294 Tripterygium wilfordii HOM05D007673 ORTHO05D009278 2.3e-12 76.3 158 36.7
TWI34G1167 Tripterygium wilfordii HOM05D007673 ORTHO05D009278 2.9e-12 75.9 163 39.3
Phvul.009G210216 Phaseolus vulgaris HOM05D007673 ORTHO05D009278 6.6e-12 74.7 163 37.4
MBI15_g28791_MAGBIO Magnolia biondii HOM05D007673 ORTHO05D009278 1.1e-11 73.9 109 47.7
TPR.G15789 Trifolium pratense HOM05D007673 ORTHO05D009278 1.5e-11 73.6 152 40.1
MSTRG.6086 Avicennia marina HOM05D007673 ORTHO05D009278 1.9e-11 73.2 158 39.9
Glyma.17G106100 Glycine max HOM05D007673 ORTHO05D009278 1.9e-11 73.2 161 37.3
vmacro21889 Vaccinium macrocarpon HOM05D007673 ORTHO05D009278 1.9e-11 73.2 182 37.4
MD02G1016300 Malus domestica HOM05D007673 ORTHO05D009278 2.5e-11 72.8 158 36.7
DCAR_017766 Daucus carota HOM05D007673 ORTHO05D009278 3.3e-11 72.4 97 48.5
HanXRQChr09g0243101 Helianthus annuus HOM05D007673 ORTHO05D009278 4.3e-11 72.0 154 37.0
Psat4g035400 Pisum sativum HOM05D007673 ORTHO05D009278 4.3e-11 72.0 152 40.1
PSO017G0897 Papaver somniferum HOM05D007673 ORTHO05D009278 9.5e-11 70.9 167 39.5
Medtr2g450420 Medicago truncatula HOM05D007673 ORTHO05D009278 2.8e-10 69.3 165 38.2
PSO170G6343 Papaver somniferum HOM05D007673 ORTHO05D009278 2.8e-10 69.3 155 37.4
Migut.K00385 Erythranthe guttata HOM05D007673 ORTHO05D009278 3.6e-10 68.9 46 71.7
Nitab4.5_0008829g0020 Nicotiana tabacum HOM05D007673 ORTHO05D009278 4.7e-10 68.6 130 40.0
Gohir.D05G013100 Gossypium hirsutum HOM05D007673 ORTHO05D009278 6.1e-10 68.2 159 39.0
Gorai.009G013100 Gossypium raimondii HOM05D007673 ORTHO05D009278 6.1e-10 68.2 159 39.0
Eucgr.C04106 Eucalyptus grandis HOM05D007673 ORTHO05D009278 8.0e-10 67.8 99 47.5
Migut.J01263 Erythranthe guttata HOM05D007673 ORTHO05D009278 1.8e-09 66.6 155 38.7
Medtr4g116360 Medicago truncatula HOM05D007673 ORTHO05D009278 2.3e-09 66.2 163 36.8
Gohir.A05G012100 Gossypium hirsutum HOM05D007673 ORTHO05D009278 5.2e-09 65.1 159 38.4
arahy.Tifrunner.gnm1.ann1.5L22XG Arachis hypogaea HOM05D007673 ORTHO05D009278 6.8e-09 64.7 167 34.1
Lsat_1_v5_gn_7_45981 Lactuca sativa HOM05D007673 ORTHO05D009278 8.9e-09 64.3 156 35.3
Phvul.003G173600 Phaseolus vulgaris HOM05D007673 ORTHO05D009278 1.2e-08 63.9 162 33.3
PGR102G0920 Punica granatum HOM05D007673 ORTHO05D009278 2.0e-08 63.2 78 55.1
ECA240G3592 Erigeron canadensis HOM05D007673 ORTHO05D009278 4.4e-08 62.0 164 38.4
Peaxi162Scf00108g00316 Petunia axillaris HOM05D007673 ORTHO05D009278 9.8e-08 60.8 153 37.9
FvH4_1g01840 Fragaria vesca HOM05D022859 ORTHO05D009278 2.9e-07 59.3 165 32.1
FAN28G1648 Fragaria x ananassa HOM05D022859 ORTHO05D009278 2.9e-07 59.3 165 32.1
Lsat_1_v5_gn_8_63020 Lactuca sativa HOM05D007673 ORTHO05D009278 4.9e-07 58.5 97 42.3
Psat0s503g0080 Pisum sativum HOM05D007673 ORTHO05D009278 6.4e-07 58.2 159 32.7
Psat0s5432g0040 Pisum sativum HOM05D007673 ORTHO05D009278 6.4e-07 58.2 159 32.7
SalBow1G8253 Salvia bowleyana HOM05D007673 ORTHO05D009278 8.3e-07 57.8 156 36.5
Sed0001942 Sechium edule HOM05D007673 ORTHO05D009278 1.9e-06 56.6 32 78.1
VMungo1215G2163 Vigna mungo HOM05D007673 ORTHO05D009278 1.9e-06 56.6 159 34.0
AUR62041460 Chenopodium quinoa HOM05D022392 ORTHO05D009278 3.2e-06 55.8 116 32.8
ECA236G3490 Erigeron canadensis HOM05D007673 ORTHO05D009278 7.0e-06 54.7 147 33.3
FAN26G0562 Fragaria x ananassa HOM05D022859 ORTHO05D009278 9.2e-06 54.3 106 37.7


User provided reference genes

Program Settings