Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0039349 Camellia sinensis var. sinensis HOM05D007556 ORTHO05D002252 1.0e-60 236.5 116 100.0
CSS0014637 Camellia sinensis var. sinensis HOM05D007556 ORTHO05D002252 2.7e-45 185.3 125 77.6
Actinidia00509 Actinidia chinensis HOM05D007556 ORTHO05D002252 2.8e-18 95.5 95 56.8
vmacro17186 Vaccinium macrocarpon HOM05D007556 ORTHO05D002252 7.0e-17 90.9 111 49.5
Dinv23538 Davidia involucrata HOM05D007556 ORTHO05D002252 1.6e-16 89.7 95 54.7
Rhsim11G0175400 Rhododendron simsii HOM05D007556 ORTHO05D002252 1.6e-16 89.7 111 49.5
TAR628G1474 Trochodendron aralioides HOM05D007556 ORTHO05D002252 1.6e-16 89.7 96 53.1
vmacro02121 Vaccinium macrocarpon HOM05D007556 ORTHO05D002252 1.6e-16 89.7 97 51.5
Rhsim11G0175600 Rhododendron simsii HOM05D007556 ORTHO05D002252 7.7e-16 87.4 111 48.6
Rhsim11G0175100 Rhododendron simsii HOM05D007556 ORTHO05D002252 2.9e-15 85.5 111 45.9
Rhsim11G0175800 Rhododendron simsii HOM05D007556 ORTHO05D002252 3.8e-15 85.1 115 46.1
TAR628G0569 Trochodendron aralioides HOM05D007556 ORTHO05D002252 6.5e-15 84.3 96 50.0
Potri.009G114800 Populus trichocarpa HOM05D007556 ORTHO05D002252 1.6e-13 79.7 113 46.9
TWI79G0288 Tripterygium wilfordii HOM05D007556 ORTHO05D002252 6.1e-13 77.8 82 48.8
Potri.009G114701 Populus trichocarpa HOM05D007556 ORTHO05D002252 8.0e-13 77.4 113 46.0
Thecc.02G086800 Theobroma cacao HOM05D007556 ORTHO05D002252 8.0e-13 77.4 105 41.0
Duzib132G0033 Durio zibethinus HOM05D007556 ORTHO05D002252 2.3e-12 75.9 123 38.2
vmacro02123 Vaccinium macrocarpon HOM05D007556 ORTHO05D002252 3.0e-12 75.5 81 48.1
Aqoxy5G01653 Aquilegia oxysepala HOM05D007556 ORTHO05D002252 6.8e-12 74.3 123 40.7
Nitab4.5_0000959g0110 Nicotiana tabacum HOM05D007556 ORTHO05D002252 3.4e-11 72.0 126 37.3
QL11p043321 Quercus lobata HOM05D007556 ORTHO05D002252 9.8e-11 70.5 112 42.0
GSVIVG01031943001 Vitis vinifera HOM05D007556 ORTHO05D002252 2.2e-10 69.3 95 43.2
Atru.chr5.2996 Acer truncatum HOM05D007556 ORTHO05D002252 6.3e-10 67.8 85 48.2
Gorai.012G152300 Gossypium raimondii HOM05D007556 ORTHO05D002252 6.3e-10 67.8 109 35.8
Oeu014344.1 Olea europaea HOM05D007556 ORTHO05D002252 6.3e-10 67.8 76 46.1
TWI79G1510 Tripterygium wilfordii HOM05D007556 ORTHO05D002252 6.3e-10 67.8 97 41.2
GSVIVG01031948001 Vitis vinifera HOM05D007556 ORTHO05D002252 8.3e-10 67.4 98 45.9
Dinv42073 Davidia involucrata HOM05D007227 ORTHO05D002252 1.8e-09 66.2 129 36.4
Gohir.A04G122100 Gossypium hirsutum HOM05D007556 ORTHO05D002252 1.8e-09 66.2 109 35.8
COL.COLO4_25915 Corchorus olitorius HOM05D007556 ORTHO05D002252 3.1e-09 65.5 118 35.6
Lj3g0003579 Lotus japonicus HOM05D010359 ORTHO05D002252 3.1e-09 65.5 112 39.3
Thecc.02G086700 Theobroma cacao HOM05D007556 ORTHO05D002252 4.1e-09 65.1 95 40.0
Aqoxy5G01668 Aquilegia oxysepala HOM05D007556 ORTHO05D002252 5.4e-09 64.7 99 40.4
Atru.chr5.2995 Acer truncatum HOM05D007556 ORTHO05D002252 9.1e-09 63.9 108 38.0
Aqoxy2G01755 Aquilegia oxysepala HOM05D003825 ORTHO05D004491 1.2e-08 63.5 108 36.1
CiPaw.06G136500 Carya illinoinensis HOM05D007556 ORTHO05D002252 1.6e-08 63.2 90 43.3
Gohir.D04G164160 Gossypium hirsutum HOM05D007556 ORTHO05D002252 2.0e-08 62.8 70 44.3
Prupe.8G099600 Prunus persica HOM05D007556 ORTHO05D002252 2.0e-08 62.8 95 38.9
COL.COLO4_11793 Corchorus olitorius HOM05D007556 ORTHO05D002252 2.7e-08 62.4 105 40.0
Prupe.8G099400 Prunus persica HOM05D007556 ORTHO05D002252 4.5e-08 61.6 66 47.0
COL.COLO4_11794 Corchorus olitorius HOM05D007556 ORTHO05D002252 7.7e-08 60.8 116 37.9
COL.COLO4_25910 Corchorus olitorius HOM05D007556 ORTHO05D002252 7.7e-08 60.8 119 37.0
Nitab4.5_0002168g0010 Nicotiana tabacum HOM05D007556 ORTHO05D002252 7.7e-08 60.8 71 47.9
Nitab4.5_0000618g0010 Nicotiana tabacum HOM05D007556 ORTHO05D002252 1.0e-07 60.5 71 47.9
Peaxi162Scf00684g00413 Petunia axillaris HOM05D007556 ORTHO05D002252 1.0e-07 60.5 71 43.7
Eucgr.G00440 Eucalyptus grandis HOM05D040694 ORTHO05D002252 2.3e-07 59.3 99 41.4
Prupe.8G098800 Prunus persica HOM05D007556 ORTHO05D002252 2.9e-07 58.9 99 39.4
Cfa005014 Carpinus fangiana HOM05D007556 ORTHO05D002252 3.8e-07 58.5 95 37.9
Dinv23539 Davidia involucrata HOM05D007227 ORTHO05D002252 3.8e-07 58.5 72 44.4
GSVIVG01031946001 Vitis vinifera HOM05D007556 ORTHO05D002252 3.8e-07 58.5 121 35.5
EL10Ac9g21739 Beta vulgaris HOM05D007227 ORTHO05D002252 5.0e-07 58.2 52 44.2
Nitab4.5_0002168g0020 Nicotiana tabacum HOM05D007556 ORTHO05D002252 5.0e-07 58.2 71 45.1
Lj3g0013453 Lotus japonicus HOM05D010359 ORTHO05D002252 6.6e-07 57.8 87 39.1
Nitab4.5_0002053g0110 Nicotiana tabacum HOM05D000024 ORTHO05D000007 6.6e-07 57.8 55 49.1
Cfa005016 Carpinus fangiana HOM05D007556 ORTHO05D002252 1.1e-06 57.0 95 36.8
COL.COLO4_37463 Corchorus olitorius HOM05D007556 ORTHO05D002252 1.1e-06 57.0 107 37.4
CiPaw.06G136300 Carya illinoinensis HOM05D007556 ORTHO05D002252 1.5e-06 56.6 128 35.9
Ciclev10013967m.g Citrus clementina HOM05D060443 ORTHO05D002252 2.5e-06 55.8 107 39.3
Nitab4.5_0000295g0010 Nicotiana tabacum HOM05D007556 ORTHO05D002252 2.5e-06 55.8 59 45.8
Nitab4.5_0002892g0020 Nicotiana tabacum HOM05D007556 ORTHO05D002252 2.5e-06 55.8 71 43.7
QL11p043287 Quercus lobata HOM05D007227 ORTHO05D002252 2.5e-06 55.8 97 41.2
Psat0s1116g0120 Pisum sativum HOM05D010359 ORTHO05D002252 3.3e-06 55.5 87 35.6
Prupe.8G098600 Prunus persica HOM05D007556 ORTHO05D002252 4.2e-06 55.1 66 43.9
SGA_v2.0_scaffold55G19792 Striga asiatica HOM05D007556 ORTHO05D002252 5.5e-06 54.7 50 46.0
Nitab4.5_0002102g0030 Nicotiana tabacum HOM05D007556 ORTHO05D002252 7.2e-06 54.3 67 44.8
Gorai.002G211000 Gossypium raimondii HOM05D007227 ORTHO05D002252 9.5e-06 53.9 96 32.3


User provided reference genes

Program Settings