Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0039346 Camellia sinensis var. sinensis HOM05D009830 ORTHO05D011381 3.0e-31 137.9 70 100.0
CSS0034930 Camellia sinensis var. sinensis HOM05D009830 ORTHO05D011381 8.8e-31 136.3 70 98.6
CSS0039796 Camellia sinensis var. sinensis HOM05D009830 ORTHO05D011381 2.2e-10 68.6 70 62.9
Nn1g03405 Nelumbo nucifera HOM05D009830 ORTHO05D011381 1.5e-09 65.9 78 55.1
Prupe.3G212800 Prunus persica HOM05D009830 ORTHO05D011381 2.5e-09 65.1 74 54.1
Haze_12789 Corylus avellana HOM05D009830 ORTHO05D011381 1.0e-07 59.7 76 51.3
Nn1g07260 Nelumbo nucifera HOM05D009830 ORTHO05D011381 1.8e-07 58.9 78 51.3
TPR.G13535 Trifolium pratense HOM05D009830 ORTHO05D011381 1.8e-07 58.9 74 45.9
TPR.G14443 Trifolium pratense HOM05D009830 ORTHO05D011381 3.0e-07 58.2 73 49.3
Glyma.14G046400 Glycine max HOM05D009830 ORTHO05D011381 8.8e-07 56.6 74 45.9
Cfa014334 Carpinus fangiana HOM05D009830 ORTHO05D011381 1.2e-06 56.2 76 50.0
Lalb_Chr10g0105701 Lupinus albus HOM05D009830 ORTHO05D011381 1.2e-06 56.2 73 46.6
Phvul.008G211300 Phaseolus vulgaris HOM05D009830 ORTHO05D011381 1.2e-06 56.2 74 45.9
Thecc.01G179900 Theobroma cacao HOM05D013710 ORTHO05D011381 1.2e-06 56.2 76 50.0
Glyma.02G270600 Glycine max HOM05D009830 ORTHO05D011381 1.5e-06 55.8 74 45.9
Medtr5g085990 Medicago truncatula HOM05D009830 ORTHO05D011381 1.5e-06 55.8 74 47.3
CiPaw.03G157300 Carya illinoinensis HOM05D009830 ORTHO05D011381 4.4e-06 54.3 76 52.6
Gohir.D11G160600 Gossypium hirsutum HOM05D013710 ORTHO05D011381 4.4e-06 54.3 81 44.4
Gorai.007G171200 Gossypium raimondii HOM05D013710 ORTHO05D011381 4.4e-06 54.3 81 44.4
Medtr3g080060 Medicago truncatula HOM05D009830 ORTHO05D011381 4.4e-06 54.3 73 43.8
Potri.014G156600 Populus trichocarpa HOM05D009830 ORTHO05D011381 7.5e-06 53.5 75 46.7
Gohir.A11G153800 Gossypium hirsutum HOM05D013710 ORTHO05D011381 9.7e-06 53.1 81 43.2


User provided reference genes

Program Settings