Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0039334 Camellia sinensis var. sinensis HOM05D004217 ORTHO05D005561 6.8e-157 557.4 299 100.0
CSS0007689 Camellia sinensis var. sinensis HOM05D004217 ORTHO05D005561 5.3e-117 424.9 299 75.6
Dinv34387 Davidia involucrata HOM05D004217 ORTHO05D005561 1.4e-114 416.8 299 74.6
Actinidia39171 Actinidia chinensis HOM05D004217 ORTHO05D005561 7.9e-113 411.0 299 72.9
GSVIVG01027868001 Vitis vinifera HOM05D004217 ORTHO05D005561 1.8e-112 409.8 299 71.9
vmacro08529 Vaccinium macrocarpon HOM05D004217 ORTHO05D005561 2.5e-111 406.0 308 71.4
Actinidia20826 Actinidia chinensis HOM05D004217 ORTHO05D005561 4.3e-111 405.2 276 77.9
Rhsim04G0175000 Rhododendron simsii HOM05D004217 ORTHO05D005561 9.6e-111 404.1 297 71.7
TWI53G1501 Tripterygium wilfordii HOM05D004217 ORTHO05D005561 9.6e-111 404.1 285 74.7
Lj2A395G21 Lonicera japonica HOM05D004217 ORTHO05D005561 4.8e-110 401.7 286 73.8
TAR623G0725 Trochodendron aralioides HOM05D004217 ORTHO05D005561 1.1e-109 400.6 299 71.6
vmacro07818 Vaccinium macrocarpon HOM05D004217 ORTHO05D005561 3.1e-109 399.1 288 72.9
Manes.09G007800 Manihot esculenta HOM05D004217 ORTHO05D005561 5.3e-109 398.3 299 70.6
SGA_v2.0_scaffold273G46404 Striga asiatica HOM05D004217 ORTHO05D005561 4.5e-108 395.2 283 73.5
TWI77G0241 Tripterygium wilfordii HOM05D004217 ORTHO05D005561 4.5e-108 395.2 285 73.3
Ah.04g151110 Amaranthus hybridus HOM05D004217 ORTHO05D005561 7.6e-108 394.4 301 68.8
RhsimUnG0216700 Rhododendron simsii HOM05D000657 ORTHO05D002092 7.6e-108 394.4 307 70.0
AUR62030333 Chenopodium quinoa HOM05D004217 ORTHO05D005561 1.3e-107 393.7 301 69.4
RhsimUnG0219800 Rhododendron simsii HOM05D004217 ORTHO05D005561 1.3e-107 393.7 307 70.0
EL10Ac3g07207 Beta vulgaris HOM05D004217 ORTHO05D005561 1.7e-107 393.3 299 68.9
HanXRQChr06g0176941 Helianthus annuus HOM05D004217 ORTHO05D005561 2.2e-107 392.9 282 73.0
HanXRQChr10g0316411 Helianthus annuus HOM05D004217 ORTHO05D005561 2.2e-107 392.9 282 73.0
AUR62031989 Chenopodium quinoa HOM05D004217 ORTHO05D005561 2.9e-107 392.5 301 68.4
Solyc10g079740.2 Solanum lycopersicum HOM05D004217 ORTHO05D005561 2.9e-107 392.5 306 68.3
Sopen10g030370 Solanum pennellii HOM05D004217 ORTHO05D005561 2.9e-107 392.5 306 68.3
Cpa.g.sc5.203 Carica papaya HOM05D004217 ORTHO05D005561 3.8e-107 392.1 300 70.0
Gohir.A11G057400 Gossypium hirsutum HOM05D004217 ORTHO05D005561 3.8e-107 392.1 278 73.7
Gohir.D11G061600 Gossypium hirsutum HOM05D004217 ORTHO05D005561 3.8e-107 392.1 278 73.7
Ciclev10021431m.g Citrus clementina HOM05D004217 ORTHO05D005561 4.9e-107 391.7 299 71.2
Potri.006G046200 Populus trichocarpa HOM05D004217 ORTHO05D005561 4.9e-107 391.7 301 70.8
Migut.K00125 Erythranthe guttata HOM05D004217 ORTHO05D005561 6.4e-107 391.3 295 69.8
Gorai.007G066400 Gossypium raimondii HOM05D004217 ORTHO05D005561 8.4e-107 391.0 278 73.7
PGSC0003DMG400029850 Solanum tuberosum HOM05D004217 ORTHO05D005561 8.4e-107 391.0 306 67.6
Aqoxy2G04056 Aquilegia oxysepala HOM05D004217 ORTHO05D005561 1.1e-106 390.6 301 71.1
Lsat_1_v5_gn_8_82561 Lactuca sativa HOM05D004217 ORTHO05D005561 1.1e-106 390.6 286 72.0
GSVIVG01034596001 Vitis vinifera HOM05D004217 ORTHO05D005561 1.1e-106 390.6 299 69.6
Peaxi162Scf01378g00115 Petunia axillaris HOM05D004217 ORTHO05D005561 2.4e-106 389.4 303 68.6
Nn7g37855 Nelumbo nucifera HOM05D004217 ORTHO05D005561 3.2e-106 389.0 300 70.3
Peaxi162Scf00620g00012 Petunia axillaris HOM05D004217 ORTHO05D005561 3.2e-106 389.0 299 69.2
Nn7g36831 Nelumbo nucifera HOM05D004217 ORTHO05D005561 4.2e-106 388.7 300 70.0
Thecc.01G136700 Theobroma cacao HOM05D004217 ORTHO05D005561 4.2e-106 388.7 302 70.2
Duzib264G1114 Durio zibethinus HOM05D004217 ORTHO05D005561 9.3e-106 387.5 302 69.5
Eucgr.A00412 Eucalyptus grandis HOM05D004217 ORTHO05D005561 1.6e-105 386.7 278 72.3
SalBow1G4717 Salvia bowleyana HOM05D004217 ORTHO05D005561 4.6e-105 385.2 307 68.4
CAN.G322.6 Capsicum annuum HOM05D004217 ORTHO05D005561 1.3e-104 383.6 283 71.0
unitig_748.g7226 Utricularia gibba HOM05D004217 ORTHO05D005561 1.3e-104 383.6 295 67.1
MBI14_g19459_MAGBIO Magnolia biondii HOM05D004217 ORTHO05D005561 1.8e-104 383.3 301 68.4
MBI15_g40529_MAGBIO Magnolia biondii HOM05D004217 ORTHO05D005561 1.8e-104 383.3 289 69.6
PSO339G2795 Papaver somniferum HOM05D004217 ORTHO05D005561 2.3e-104 382.9 291 69.8
Ca_16232_v3 Cicer arietinum L. HOM05D004217 ORTHO05D005561 3.0e-104 382.5 284 71.5
Lalb_Chr04g0255801 Lupinus albus HOM05D004217 ORTHO05D005561 3.9e-104 382.1 293 68.3
Sc13g0001310 Simmondsia chinensis HOM05D004217 ORTHO05D005561 3.9e-104 382.1 290 67.9
TAR369G0413 Trochodendron aralioides HOM05D004217 ORTHO05D005561 6.7e-104 381.3 300 69.0
Hund24631 Selenicereus undatus HOM05D004217 ORTHO05D005561 8.7e-104 380.9 301 67.8
THA.LOC104824417 Tarenaya hassleriana HOM05D004217 ORTHO05D005561 8.7e-104 380.9 292 68.2
PGR142G4280 Punica granatum HOM05D004217 ORTHO05D005561 1.1e-103 380.6 291 69.8
ATR0580G123 Amborella trichopoda HOM05D004217 ORTHO05D005561 3.3e-103 379.0 299 67.2
DCAR_020547 Daucus carota HOM05D004217 ORTHO05D005561 4.3e-103 378.6 283 71.4
THA.LOC104803276 Tarenaya hassleriana HOM05D004217 ORTHO05D005561 7.4e-103 377.9 291 68.0
Oeu029495.1 Olea europaea HOM05D004217 ORTHO05D005561 1.3e-102 377.1 283 70.3
Cc06_g18810 Coffea canephora HOM05D004217 ORTHO05D005561 1.6e-102 376.7 304 66.4
arahy.Tifrunner.gnm1.ann1.GAG45E Arachis hypogaea HOM05D004217 ORTHO05D005561 4.8e-102 375.2 294 68.0
CiPaw.10G038800 Carya illinoinensis HOM05D004217 ORTHO05D005561 4.8e-102 375.2 292 67.5
arahy.Tifrunner.gnm1.ann1.35MU93 Arachis hypogaea HOM05D004217 ORTHO05D005561 6.2e-102 374.8 294 68.0
Cfa016692 Carpinus fangiana HOM05D004217 ORTHO05D005561 6.2e-102 374.8 292 67.8
Gohir.A03G048200 Gossypium hirsutum HOM05D004217 ORTHO05D005561 6.2e-102 374.8 266 74.1
PSO384G3185 Papaver somniferum HOM05D004217 ORTHO05D005561 8.2e-102 374.4 291 68.4
MSTRG.15652 Avicennia marina HOM05D004217 ORTHO05D005561 1.4e-101 373.6 335 61.2
Gohir.D03G072900 Gossypium hirsutum HOM05D004217 ORTHO05D005561 2.4e-101 372.9 265 73.6
MELO3C019047.2 Cucumis melo HOM05D004217 ORTHO05D005561 4.0e-101 372.1 278 69.8
CsaV3_4G027820 Cucumis sativus L. HOM05D004217 ORTHO05D005561 4.0e-101 372.1 278 70.1
CsaV3_3G041090 Cucumis sativus L. HOM05D004217 ORTHO05D005561 5.3e-101 371.7 278 69.8
TPR.G5939 Trifolium pratense HOM05D004217 ORTHO05D005561 5.3e-101 371.7 284 70.1
VMungo0464G0563 Vigna mungo HOM05D004217 ORTHO05D005561 6.9e-101 371.3 276 71.0
A03p23240 Brassica napus HOM05D004217 ORTHO05D005561 9.0e-101 370.9 298 65.8
C03p27740 Brassica napus HOM05D004217 ORTHO05D005561 9.0e-101 370.9 298 65.8
Thhalv10017004m.g Eutrema salsugineum HOM05D004217 ORTHO05D005561 1.2e-100 370.5 291 66.7
Gohir.D11G169000 Gossypium hirsutum HOM05D004217 ORTHO05D005561 1.5e-100 370.2 268 72.4
Sc25g0005400 Simmondsia chinensis HOM05D004217 ORTHO05D005561 1.5e-100 370.2 299 65.2
TPR.G15791 Trifolium pratense HOM05D004217 ORTHO05D005561 1.5e-100 370.2 284 69.0
CANSAT78G1576 Cannabis sativa HOM05D004217 ORTHO05D005561 2.6e-100 369.4 278 70.9
Gohir.A03G146300 Gossypium hirsutum HOM05D004217 ORTHO05D005561 3.4e-100 369.0 265 72.8
BcaC01g05340 Brassica carinata HOM05D004217 ORTHO05D005561 4.5e-100 368.6 298 65.4
Lj6g0025691 Lotus japonicus HOM05D004217 ORTHO05D005561 4.5e-100 368.6 276 70.3
BraA03t11543Z Brassica rapa HOM05D004217 ORTHO05D005561 7.6e-100 367.9 299 65.6
Phvul.004G165200 Phaseolus vulgaris HOM05D004217 ORTHO05D005561 7.6e-100 367.9 274 71.2
Sed0000264 Sechium edule HOM05D004217 ORTHO05D005561 1.0e-99 367.5 299 66.6
Atru.chr1.1483 Acer truncatum HOM05D004217 ORTHO05D005561 1.3e-99 367.1 278 69.4
CARHR136470 Cardamine hirsuta HOM05D004217 ORTHO05D005561 1.7e-99 366.7 285 66.7
Sp4g23650 Schrenkiella parvula HOM05D004217 ORTHO05D005561 2.2e-99 366.3 294 64.6
Aa31LG5G11710 Aethionema arabicum HOM05D004217 ORTHO05D005561 2.9e-99 365.9 286 67.1
BolC3t15143H Brassica oleracea HOM05D004217 ORTHO05D005561 3.8e-99 365.5 299 65.2
AT2G41350 Arabidopsis thaliana HOM05D004217 ORTHO05D005561 4.9e-99 365.2 285 66.7
Lalb_Chr17g0341031 Lupinus albus HOM05D004217 ORTHO05D005561 6.5e-99 364.8 289 66.4
BcaB01g03471 Brassica carinata HOM05D004217 ORTHO05D005561 1.4e-98 363.6 295 64.7
Carub.0004s2365 Capsella rubella HOM05D004217 ORTHO05D005561 3.2e-98 362.5 285 65.6
RcHm_v2.0_Chr2g0125061 Rosa chinensis HOM05D004217 ORTHO05D005561 1.2e-97 360.5 299 65.9
AL4G39350 Arabidopsis lyrata HOM05D004217 ORTHO05D005561 1.6e-97 360.1 284 66.5
ClCG04G004230 Citrullus lanatus HOM05D004217 ORTHO05D005561 1.6e-97 360.1 307 63.8
MD14G1084500 Malus domestica HOM05D004217 ORTHO05D005561 1.6e-97 360.1 278 68.0
Glyma.07G084800 Glycine max HOM05D004217 ORTHO05D005561 3.5e-97 359.0 274 69.7
Medtr3g079220 Medicago truncatula HOM05D004217 ORTHO05D005561 4.6e-97 358.6 281 68.3
FvH4_6g25170 Fragaria vesca HOM05D004217 ORTHO05D005561 1.8e-96 356.7 285 66.3
FAN14G1007 Fragaria x ananassa HOM05D004217 ORTHO05D005561 1.8e-96 356.7 285 66.3
Glyma.09G192100 Glycine max HOM05D004217 ORTHO05D005561 3.9e-96 355.5 274 69.0
MD12G1092800 Malus domestica HOM05D004217 ORTHO05D005561 8.7e-96 354.4 299 63.9
FAN09G3751 Fragaria x ananassa HOM05D004217 ORTHO05D005561 1.5e-95 353.6 285 66.0
Gohir.A12G042000 Gossypium hirsutum HOM05D004217 ORTHO05D005561 1.9e-95 353.2 266 71.4
QL07p008431 Quercus lobata HOM05D004217 ORTHO05D005561 4.3e-95 352.1 311 62.1
Sabra06G0031800 Salix brachista HOM05D004217 ORTHO05D005561 4.3e-95 352.1 301 65.8
CDE04G1366 Ceratophyllum demersum HOM05D004217 ORTHO05D005561 5.7e-95 351.7 299 62.5
Haze_19719 Corylus avellana HOM05D004217 ORTHO05D005561 9.7e-95 350.9 328 59.8
Psat5g112680 Pisum sativum HOM05D004217 ORTHO05D005561 1.3e-94 350.5 293 63.8
Gohir.A07G124200 Gossypium hirsutum HOM05D004217 ORTHO05D005561 4.1e-93 345.5 265 70.2
Prupe.7G043700 Prunus persica HOM05D004217 ORTHO05D005561 6.9e-93 344.7 297 63.3
Gohir.D11G296900 Gossypium hirsutum HOM05D004217 ORTHO05D005561 1.5e-92 343.6 284 66.5
SalBow6G4102 Salvia bowleyana HOM05D004217 ORTHO05D005561 3.8e-91 339.0 275 63.3
HPP92_018983 Vanilla planifolia HOM05D004217 ORTHO05D005561 2.5e-90 336.3 283 63.3
CAN.G541.30 Capsicum annuum HOM05D004217 ORTHO05D005561 1.1e-87 327.4 283 63.3
Nitab4.5_0000571g0060 Nicotiana tabacum HOM05D004217 ORTHO05D005561 2.5e-87 326.2 302 61.3
SMO118G0157 Selaginella moellendorffii HOM05D004217 ORTHO05D005561 3.3e-87 325.9 279 59.9
Nitab4.5_0000636g0010 Nicotiana tabacum HOM05D004217 ORTHO05D005561 5.7e-87 325.1 279 63.8
Gohir.A02G062500 Gossypium hirsutum HOM05D004217 ORTHO05D005561 9.7e-87 324.3 233 72.1
Nitab4.5_0001874g0050 Nicotiana tabacum HOM05D004217 ORTHO05D005561 1.3e-86 323.9 283 62.9
Pp3c1_31980 Physcomitrium patens HOM05D004217 ORTHO05D005561 1.1e-85 320.9 280 61.1
Sc13g0001330 Simmondsia chinensis HOM05D004217 ORTHO05D005561 2.4e-85 319.7 257 64.6
QL07p008692 Quercus lobata HOM05D004217 ORTHO05D005561 4.5e-84 315.5 339 54.6
COL.COLO4_35807 Corchorus olitorius HOM05D004217 ORTHO05D005561 8.5e-83 311.2 278 61.5
Hma1.2p1_0521F.1_g171490 Hydrangea macrophylla HOM05D004217 ORTHO05D005561 2.0e-79 300.1 212 75.0
AagrBONN_evm.TU.Sc2ySwM_362.1682 Anthoceros agrestis HOM05D004217 ORTHO05D005561 1.5e-76 290.4 284 53.2
DCAR_027531 Daucus carota HOM05D004217 ORTHO05D005561 2.6e-76 289.7 283 60.1
Zm00001eb178240 Zea mays HOM05D004217 ORTHO05D005561 7.2e-74 281.6 308 51.9
SEGI_06876 Sequoiadendron giganteum HOM05D004217 ORTHO05D005561 1.6e-73 280.4 275 52.0
Eucgr.A00321 Eucalyptus grandis HOM05D004217 ORTHO05D005561 3.5e-68 262.7 196 69.9
EL10Ac6g14020 Beta vulgaris HOM05D004217 ORTHO05D005561 2.7e-65 253.1 267 53.9
SHI05064 Sapria himalayana HOM05D004217 ORTHO05D005561 5.2e-64 248.8 211 60.2
CDE07G0389 Ceratophyllum demersum HOM05D004217 ORTHO05D005561 2.6e-63 246.5 222 60.4
Os08g0240600 Oryza sativa ssp. japonica HOM05D004217 ORTHO05D005561 2.8e-62 243.0 252 54.4
Mapoly0239s0006 Marchantia polymorpha HOM05D004217 ORTHO05D005561 1.4e-61 240.7 278 50.0
Dinv08497 Davidia involucrata HOM05D004217 ORTHO05D005561 2.4e-61 240.0 196 68.4
ECA236G0163 Erigeron canadensis HOM05D004217 ORTHO05D005561 1.0e-56 224.6 162 69.1
CBR_g38257 Chara braunii HOM05D004217 ORTHO05D005561 5.0e-51 205.7 250 44.4
Actinidia32317 Actinidia chinensis HOM05D004217 ORTHO05D005561 2.6e-47 193.4 162 64.2
Carub.0004s0112 Capsella rubella HOM05D004217 ORTHO05D005561 4.3e-34 149.4 169 53.3
A04p31520 Brassica napus HOM05D004217 ORTHO05D005561 1.8e-32 144.1 178 47.8
BraA04t18609Z Brassica rapa HOM05D004217 ORTHO05D005561 1.8e-32 144.1 178 47.8
C04p68950 Brassica napus HOM05D004217 ORTHO05D005561 1.2e-31 141.4 107 65.4
BolC4t28396H Brassica oleracea HOM05D004217 ORTHO05D005561 1.2e-31 141.4 107 65.4
BcaC02g12897 Brassica carinata HOM05D004217 ORTHO05D005561 1.0e-27 128.3 95 65.3
Sabra16G0048200 Salix brachista HOM05D000002 ORTHO05D000047 5.1e-27 125.9 144 53.5
SHI39628 Sapria himalayana HOM05D004217 ORTHO05D005561 4.7e-25 119.4 81 70.4
Peaxi162Scf01233g00007 Petunia axillaris HOM05D004217 ORTHO05D005561 5.8e-23 112.5 94 63.8
MBI15_g39623_MAGBIO Magnolia biondii HOM05D004217 ORTHO05D016559 1.9e-21 107.5 96 63.5
Aqoxy5G00134 Aquilegia oxysepala HOM05D004217 ORTHO05D016559 9.5e-18 95.1 99 60.6
MD12G1067200 Malus domestica HOM05D004217 ORTHO05D005561 5.2e-16 89.4 81 56.8
arahy.Tifrunner.gnm1.ann1.505PCM Arachis hypogaea HOM05D003289 ORTHO05D016559 4.9e-14 82.8 83 53.0
arahy.Tifrunner.gnm1.ann1.XNH8SK Arachis hypogaea HOM05D004217 ORTHO05D016559 5.4e-13 79.3 83 49.4
AT2G21980 Arabidopsis thaliana HOM05D004217 ORTHO05D005561 2.7e-12 77.0 58 65.5
arahy.Tifrunner.gnm1.ann1.CY1WZS Arachis hypogaea HOM05D004217 ORTHO05D016559 1.7e-11 74.3 88 45.5
arahy.Tifrunner.gnm1.ann1.2C13MW Arachis hypogaea HOM05D004217 ORTHO05D016559 5.1e-11 72.8 91 42.9
FAN17G2754 Fragaria x ananassa HOM05D004217 ORTHO05D005561 8.7e-11 72.0 52 71.2
AL7G43680 Arabidopsis lyrata HOM05D004217 ORTHO05D026831 2.5e-10 70.5 58 58.6
arahy.Tifrunner.gnm1.ann1.5F2ED3 Arachis hypogaea HOM05D004217 ORTHO05D016559 3.3e-10 70.1 83 48.2
AL7G51080 Arabidopsis lyrata HOM05D004217 ORTHO05D080694 9.6e-10 68.6 58 58.6
FAN22G2236 Fragaria x ananassa HOM05D004217 ORTHO05D005561 8.1e-09 65.5 70 57.1
ATR0564G208 Amborella trichopoda HOM05D004217 ORTHO05D064567 9.0e-08 62.0 113 34.5
AL4G11300 Arabidopsis lyrata HOM05D004217 ORTHO05D005561 2.2e-06 57.4 59 50.8


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