Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0039326 Camellia sinensis var. sinensis HOM05D000599 ORTHO05D006883 1.1e-119 433.3 227 100.0
CSS0008026 Camellia sinensis var. sinensis HOM05D000599 ORTHO05D006883 2.5e-58 229.6 208 66.3
CSS0043173 Camellia sinensis var. sinensis HOM05D000599 ORTHO05D006883 4.6e-57 225.3 208 65.4
Haze_09378 Corylus avellana HOM05D000599 ORTHO05D006883 3.6e-49 199.1 231 51.9
vmacro11900 Vaccinium macrocarpon HOM05D000599 ORTHO05D006883 6.1e-49 198.4 208 57.7
Oeu025350.3 Olea europaea HOM05D000599 ORTHO05D006883 7.9e-49 198.0 208 57.2
Dinv20217 Davidia involucrata HOM05D000599 ORTHO05D006883 1.4e-48 197.2 208 56.7
Cfa020625 Carpinus fangiana HOM05D000599 ORTHO05D006883 3.0e-48 196.1 208 55.8
Rhsim06G0203600 Rhododendron simsii HOM05D000599 ORTHO05D006883 8.8e-48 194.5 206 57.8
Lj1A836G33 Lonicera japonica HOM05D000599 ORTHO05D006883 9.7e-47 191.0 208 56.2
TWI38G1662 Tripterygium wilfordii HOM05D000599 ORTHO05D006883 1.7e-46 190.3 208 53.4
Manes.12G158400 Manihot esculenta HOM05D000599 ORTHO05D006883 2.2e-46 189.9 208 53.4
CAN.G329.7 Capsicum annuum HOM05D000599 ORTHO05D006883 4.8e-46 188.7 208 54.8
TAR627G0901 Trochodendron aralioides HOM05D000599 ORTHO05D006883 4.8e-46 188.7 208 54.3
GSVIVG01014259001 Vitis vinifera HOM05D000599 ORTHO05D006883 6.3e-46 188.3 208 54.3
QL08p023388 Quercus lobata HOM05D000599 ORTHO05D006883 1.4e-45 187.2 208 52.9
CiPaw.12G116700 Carya illinoinensis HOM05D000599 ORTHO05D006883 1.8e-45 186.8 208 53.8
Cpa.g.sc80.13 Carica papaya HOM05D000599 ORTHO05D006883 2.4e-45 186.4 210 53.3
PGSC0003DMG400015372 Solanum tuberosum HOM05D000599 ORTHO05D006883 2.4e-45 186.4 207 54.1
ClCG05G009200 Citrullus lanatus HOM05D000599 ORTHO05D006883 3.1e-45 186.0 207 53.1
PGR083G0548 Punica granatum HOM05D000599 ORTHO05D006883 5.3e-45 185.3 208 53.4
Solyc12g014050.2 Solanum lycopersicum HOM05D000599 ORTHO05D006883 5.3e-45 185.3 207 53.6
CANSAT35G1865 Cannabis sativa HOM05D000599 ORTHO05D006883 1.2e-44 184.1 207 54.1
arahy.Tifrunner.gnm1.ann1.10FGX8 Arachis hypogaea HOM05D000599 ORTHO05D006883 1.5e-44 183.7 208 52.4
Sopen12g005790 Solanum pennellii HOM05D000599 ORTHO05D006883 1.5e-44 183.7 207 53.1
Potri.001G373200 Populus trichocarpa HOM05D000599 ORTHO05D006883 2.0e-44 183.3 246 48.8
RcHm_v2.0_Chr5g0031931 Rosa chinensis HOM05D000599 ORTHO05D006883 2.0e-44 183.3 208 51.9
arahy.Tifrunner.gnm1.ann1.PD8C8E Arachis hypogaea HOM05D000599 ORTHO05D006883 2.6e-44 183.0 208 52.9
Peaxi162Scf00000g00284 Petunia axillaris HOM05D000599 ORTHO05D006883 2.6e-44 183.0 207 52.7
Sc16g0007340 Simmondsia chinensis HOM05D000599 ORTHO05D006883 2.6e-44 183.0 208 51.4
Cc05_g11570 Coffea canephora HOM05D000599 ORTHO05D006883 4.5e-44 182.2 209 53.6
Nitab4.5_0000332g0200 Nicotiana tabacum HOM05D000599 ORTHO05D006883 4.5e-44 182.2 208 54.3
CsaV3_3G019590 Cucumis sativus L. HOM05D000599 ORTHO05D006883 5.9e-44 181.8 207 51.2
ECA234G4269 Erigeron canadensis HOM05D001613 ORTHO05D006883 1.0e-43 181.0 208 51.9
CiPaw.11G166300 Carya illinoinensis HOM05D000599 ORTHO05D006883 1.3e-43 180.6 201 53.7
Lalb_Chr25g0286171 Lupinus albus HOM05D000599 ORTHO05D006883 1.3e-43 180.6 208 52.4
Aqoxy4G00576 Aquilegia oxysepala HOM05D000599 ORTHO05D006883 1.7e-43 180.3 246 46.7
FAN16G1937 Fragaria x ananassa HOM05D000599 ORTHO05D006883 1.7e-43 180.3 208 51.9
MBI06_g45594_MAGBIO Magnolia biondii HOM05D000599 ORTHO05D006883 2.9e-43 179.5 208 52.9
Os01g0753100 Oryza sativa ssp. japonica HOM05D000599 ORTHO05D006883 2.9e-43 179.5 207 51.2
Sabra16G0245600 Salix brachista HOM05D000599 ORTHO05D006883 2.9e-43 179.5 246 49.2
Duzib213G1012 Durio zibethinus HOM05D000599 ORTHO05D006883 3.8e-43 179.1 208 52.9
FAN21G2449 Fragaria x ananassa HOM05D000599 ORTHO05D006883 3.8e-43 179.1 208 51.4
FAN11G3855 Fragaria x ananassa HOM05D000599 ORTHO05D006883 5.0e-43 178.7 208 51.0
AUR62019503 Chenopodium quinoa HOM05D000599 ORTHO05D006883 6.5e-43 178.3 207 50.2
HanXRQChr10g0302461 Helianthus annuus HOM05D000599 ORTHO05D006883 6.5e-43 178.3 208 51.9
HPP92_021507 Vanilla planifolia HOM05D000599 ORTHO05D006883 6.5e-43 178.3 208 50.5
Migut.M00767 Erythranthe guttata HOM05D000599 ORTHO05D006883 1.1e-42 177.6 208 51.9
Phvul.005G069200 Phaseolus vulgaris HOM05D000599 ORTHO05D006883 1.1e-42 177.6 207 51.7
DCAR_021003 Daucus carota HOM05D000599 ORTHO05D006883 1.5e-42 177.2 208 50.0
Glyma.12G227400 Glycine max HOM05D000599 ORTHO05D006883 1.5e-42 177.2 208 51.4
Sed0014270 Sechium edule HOM05D000599 ORTHO05D006883 1.5e-42 177.2 208 50.0
Eucgr.F01180 Eucalyptus grandis HOM05D000599 ORTHO05D006883 1.9e-42 176.8 206 51.9
AUR62036135 Chenopodium quinoa HOM05D000599 ORTHO05D006883 2.5e-42 176.4 207 50.2
EL10Ac4g08277 Beta vulgaris HOM05D000599 ORTHO05D006883 4.2e-42 175.6 218 48.2
Atru.chr2.2379 Acer truncatum HOM05D000599 ORTHO05D006883 7.2e-42 174.9 207 51.7
SalBow7G1016 Salvia bowleyana HOM05D000599 ORTHO05D006883 7.2e-42 174.9 208 50.0
Prupe.4G173000 Prunus persica HOM05D000599 ORTHO05D006883 9.4e-42 174.5 207 51.2
MELO3C019391.2 Cucumis melo HOM05D000599 ORTHO05D006883 1.2e-41 174.1 201 50.2
DCAR_019576 Daucus carota HOM05D000599 ORTHO05D006883 1.2e-41 174.1 246 46.3
VMungo1080G1405 Vigna mungo HOM05D000599 ORTHO05D006883 1.6e-41 173.7 207 51.2
Gorai.002G066100 Gossypium raimondii HOM05D000599 ORTHO05D006883 2.1e-41 173.3 208 51.0
PSO832G3682 Papaver somniferum HOM05D000599 ORTHO05D006883 2.1e-41 173.3 209 49.3
Thhalv10020985m.g Eutrema salsugineum HOM05D000599 ORTHO05D006883 2.7e-41 172.9 212 50.0
ATR0602G106 Amborella trichopoda HOM05D000599 ORTHO05D006883 4.7e-41 172.2 208 47.1
Lj3g0008187 Lotus japonicus HOM05D000599 ORTHO05D006883 6.1e-41 171.8 208 49.5
THA.LOC104810454 Tarenaya hassleriana HOM05D000599 ORTHO05D006883 8.0e-41 171.4 212 49.1
Gohir.D01G046600 Gossypium hirsutum HOM05D000599 ORTHO05D006883 1.0e-40 171.0 208 52.4
Hund22810 Selenicereus undatus HOM05D000599 ORTHO05D006883 1.4e-40 170.6 207 50.2
Zm00001eb152950 Zea mays HOM05D000599 ORTHO05D006883 1.4e-40 170.6 205 49.8
Duzib170G0842 Durio zibethinus HOM05D000599 ORTHO05D006883 1.8e-40 170.2 200 51.5
C03p47500 Brassica napus HOM05D000599 ORTHO05D006883 2.3e-40 169.9 212 48.6
BolC3t17014H Brassica oleracea HOM05D000599 ORTHO05D006883 2.3e-40 169.9 212 48.6
Glyma.13G272900 Glycine max HOM05D000599 ORTHO05D006883 2.3e-40 169.9 208 49.5
MD11G1257100 Malus domestica HOM05D000599 ORTHO05D006883 3.0e-40 169.5 207 49.3
Sp3g13290 Schrenkiella parvula HOM05D000599 ORTHO05D006883 3.0e-40 169.5 211 49.8
MD03G1236200 Malus domestica HOM05D000599 ORTHO05D006883 4.0e-40 169.1 208 49.5
PSO210G4318 Papaver somniferum HOM05D000599 ORTHO05D006883 4.0e-40 169.1 209 47.8
SGA_v2.0_scaffold73G24221 Striga asiatica HOM05D000599 ORTHO05D006883 4.0e-40 169.1 208 51.4
AT3G15090 Arabidopsis thaliana HOM05D000599 ORTHO05D006883 5.2e-40 168.7 207 49.3
BraA03t13064Z Brassica rapa HOM05D000599 ORTHO05D006883 5.2e-40 168.7 212 48.6
Ciclev10008721m.g Citrus clementina HOM05D000599 ORTHO05D006883 5.2e-40 168.7 211 49.3
A03p39150 Brassica napus HOM05D000599 ORTHO05D006883 6.7e-40 168.3 212 48.1
CARHR090050 Cardamine hirsuta HOM05D000599 ORTHO05D006883 6.7e-40 168.3 207 49.3
Ah.04g164460 Amaranthus hybridus HOM05D000599 ORTHO05D006883 3.3e-39 166.0 207 46.9
Carub.0003s1473 Capsella rubella HOM05D000599 ORTHO05D006883 3.3e-39 166.0 207 48.3
AL3G27440 Arabidopsis lyrata HOM05D000599 ORTHO05D006883 4.4e-39 165.6 207 48.8
A05p34360 Brassica napus HOM05D000599 ORTHO05D006883 4.4e-39 165.6 209 48.8
BcaB06g29534 Brassica carinata HOM05D000599 ORTHO05D006883 5.7e-39 165.2 209 48.8
C05p52130 Brassica napus HOM05D000599 ORTHO05D006883 5.7e-39 165.2 209 48.8
BolC5t33898H Brassica oleracea HOM05D000599 ORTHO05D006883 5.7e-39 165.2 209 48.8
BraA05t22256Z Brassica rapa HOM05D000599 ORTHO05D006883 1.3e-38 164.1 209 48.3
BcaC01g03898 Brassica carinata HOM05D000599 ORTHO05D006883 4.8e-38 162.2 207 47.3
Medtr2g078520 Medicago truncatula HOM05D000599 ORTHO05D006883 1.2e-36 157.5 207 47.3
Ca_04028_v3 Cicer arietinum L. HOM05D000599 ORTHO05D006883 2.0e-36 156.8 213 44.6
Aa31LG8G2300 Aethionema arabicum HOM05D000599 ORTHO05D006883 7.7e-36 154.8 238 42.4
Lsat_1_v5_gn_5_128780 Lactuca sativa HOM05D000599 ORTHO05D006883 2.2e-35 153.3 229 43.7
Psat5g241360 Pisum sativum HOM05D000599 ORTHO05D006883 5.0e-35 152.1 207 44.4
Nn1g04277 Nelumbo nucifera HOM05D000599 ORTHO05D006883 8.5e-35 151.4 187 50.3
Gohir.A01G060100 Gossypium hirsutum HOM05D000599 ORTHO05D006883 1.2e-33 147.5 208 47.6
unitig_52.g17400 Utricularia gibba HOM05D000599 ORTHO05D006883 5.2e-32 142.1 188 47.9
Dinv14951 Davidia involucrata HOM05D001613 ORTHO05D001556 1.2e-31 141.0 124 64.5
Nitab4.5_0003033g0020 Nicotiana tabacum HOM05D000599 ORTHO05D006883 2.2e-30 136.7 196 46.4
RcHm_v2.0_Chr5g0032041 Rosa chinensis HOM05D000599 ORTHO05D006883 3.1e-29 132.9 200 44.5
Thecc.07G100100 Theobroma cacao HOM05D000599 ORTHO05D006883 5.4e-29 132.1 196 45.9
Mapoly0049s0129 Marchantia polymorpha HOM05D000599 ORTHO05D006883 9.1e-29 131.3 208 39.9
FvH4_3g19130 Fragaria vesca HOM05D000599 ORTHO05D006883 1.0e-27 127.9 120 56.7
Pp3c14_1550 Physcomitrium patens HOM05D000599 ORTHO05D006883 5.5e-26 122.1 208 36.1
Actinidia12546 Actinidia chinensis HOM05D000599 ORTHO05D006883 8.8e-24 114.8 81 72.8
RcHm_v2.0_Chr5g0032001 Rosa chinensis HOM05D000599 ORTHO05D006883 6.3e-22 108.6 156 44.9
SMO116G0426 Selaginella moellendorffii HOM05D000599 ORTHO05D006883 1.4e-21 107.5 208 36.5
Oeu007447.1 Olea europaea HOM05D008214 ORTHO05D006883 2.7e-20 103.2 157 43.3
CSS0025668 Camellia sinensis var. sinensis HOM05D000599 ORTHO05D006883 3.8e-19 99.4 74 74.3
CSS0008464 Camellia sinensis var. sinensis HOM05D000599 ORTHO05D006883 8.6e-19 98.2 74 73.0
CBR_g49987 Chara braunii HOM05D000599 ORTHO05D006883 1.3e-14 84.3 115 43.5
FAN25G3373 Fragaria x ananassa HOM05D000599 ORTHO05D006883 9.2e-13 78.2 53 73.6
Duzib177G0850 Durio zibethinus HOM05D000599 ORTHO05D006883 4.6e-12 75.9 61 59.0
TPR.G40527 Trifolium pratense HOM05D000599 ORTHO05D006883 1.3e-11 74.3 62 58.1
AagrBONN_evm.TU.Sc2ySwM_368.514 Anthoceros agrestis HOM05D000599 ORTHO05D006883 1.5e-10 70.9 190 31.1
TPR.G22064 Trifolium pratense HOM05D000599 ORTHO05D006883 1.9e-10 70.5 116 39.7
arahy.Tifrunner.gnm1.ann1.QT2X3H Arachis hypogaea HOM05D000599 ORTHO05D006883 4.3e-10 69.3 63 57.1
COL.COLO4_34031 Corchorus olitorius HOM05D000599 ORTHO05D006883 2.8e-09 66.6 52 67.3
BcaC01g03893 Brassica carinata HOM05D000599 ORTHO05D006883 9.8e-07 58.2 53 54.7
SEGI_26852 Sequoiadendron giganteum HOM05D000599 ORTHO05D006883 6.4e-06 55.5 58 39.7


User provided reference genes

Program Settings