Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0039234 Camellia sinensis var. sinensis HOM05D005405 ORTHO05D006333 3.4e-65 251.5 127 100.0
CSS0043604 Camellia sinensis var. sinensis HOM05D005405 ORTHO05D006333 7.6e-25 117.5 66 90.9
CSS0016720 Camellia sinensis var. sinensis HOM05D005405 ORTHO05D006333 2.2e-24 115.9 66 89.4
Actinidia11394 Actinidia chinensis HOM05D005405 ORTHO05D006333 5.7e-12 74.7 60 65.0
DCAR_030784 Daucus carota HOM05D005405 ORTHO05D006333 7.4e-12 74.3 64 62.5
Rhsim02G0053500 Rhododendron simsii HOM05D005405 ORTHO05D006333 3.7e-11 72.0 93 46.2
Lj6A613T36 Lonicera japonica HOM05D005405 ORTHO05D006333 1.0e-08 63.9 65 58.5
Nitab4.5_0002920g0020 Nicotiana tabacum HOM05D005405 ORTHO05D006333 2.2e-08 62.8 90 45.6
Dinv38269 Davidia involucrata HOM05D005405 ORTHO05D006333 2.9e-08 62.4 62 54.8
Nitab4.5_0003904g0030 Nicotiana tabacum HOM05D005405 ORTHO05D006333 2.9e-08 62.4 90 45.6
Peaxi162Scf00047g01223 Petunia axillaris HOM05D005405 ORTHO05D006333 3.8e-08 62.0 103 43.7
vmacro23320 Vaccinium macrocarpon HOM05D005405 ORTHO05D006333 3.8e-08 62.0 113 38.1
Solyc09g091480.4 Solanum lycopersicum HOM05D005405 ORTHO05D006333 5.0e-08 61.6 74 51.4
Sopen09g034410 Solanum pennellii HOM05D005405 ORTHO05D006333 5.0e-08 61.6 74 51.4
PGSC0003DMG400029647 Solanum tuberosum HOM05D005405 ORTHO05D006333 1.1e-07 60.5 74 50.0
Cc03_g07300 Coffea canephora HOM05D005405 ORTHO05D006333 1.2e-06 57.0 67 49.3
Oeu022333.1 Olea europaea HOM05D005405 ORTHO05D006333 1.2e-06 57.0 62 56.5
MSTRG.21949 Avicennia marina HOM05D005405 ORTHO05D006333 7.9e-06 54.3 61 54.1


User provided reference genes

Program Settings