Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0039150 Camellia sinensis var. sinensis HOM05D003515 ORTHO05D004347 4.9e-160 567.8 289 100.0
CSS0041884 Camellia sinensis var. sinensis HOM05D003515 ORTHO05D004347 6.7e-101 371.3 262 77.9
CSS0015899 Camellia sinensis var. sinensis HOM05D003515 ORTHO05D004347 1.7e-96 356.7 272 74.3
CSS0004888 Camellia sinensis var. sinensis HOM05D003515 ORTHO05D004347 6.5e-96 354.8 267 73.4
CSS0001709 Camellia sinensis var. sinensis HOM05D003515 ORTHO05D004347 8.4e-96 354.4 288 70.1
CSS0002085 Camellia sinensis var. sinensis HOM05D003515 ORTHO05D004347 2.5e-87 326.2 220 80.0
CSS0029313 Camellia sinensis var. sinensis HOM05D003515 ORTHO05D004347 1.4e-77 293.9 206 77.7
vmacro03558 Vaccinium macrocarpon HOM05D003515 ORTHO05D004347 1.1e-39 167.9 269 44.2
RhsimUnG0176900 Rhododendron simsii HOM05D003515 ORTHO05D004347 4.4e-36 156.0 314 40.8
Dinv07004 Davidia involucrata HOM05D003515 ORTHO05D004347 6.4e-35 152.1 286 40.2
Rhsim13G0134000 Rhododendron simsii HOM05D003515 ORTHO05D004347 4.7e-30 136.0 357 36.4
Lj1C1149T14 Lonicera japonica HOM05D003515 ORTHO05D004347 1.4e-26 124.4 270 36.7
CSS0035626 Camellia sinensis var. sinensis HOM05D003515 ORTHO05D004347 9.5e-23 111.7 87 71.3
CSS0002123 Camellia sinensis var. sinensis HOM05D003515 ORTHO05D004347 2.1e-22 110.5 94 66.0
QL11p012061 Quercus lobata HOM05D003515 ORTHO05D004347 2.8e-22 110.2 289 33.6
CSS0032761 Camellia sinensis var. sinensis HOM05D003515 ORTHO05D004347 3.6e-22 109.8 94 66.0
CSS0031993 Camellia sinensis var. sinensis HOM05D003515 ORTHO05D004347 8.9e-21 105.1 277 34.3
TWI63G0015 Tripterygium wilfordii HOM05D003515 ORTHO05D004347 2.2e-19 100.5 264 33.3
Atru.chr10.315 Acer truncatum HOM05D003515 ORTHO05D004347 4.9e-19 99.4 277 33.2
CiPaw.10G105500 Carya illinoinensis HOM05D003515 ORTHO05D004347 2.4e-18 97.1 260 35.0
Cfa001125 Carpinus fangiana HOM05D003515 ORTHO05D004347 9.2e-18 95.1 264 32.2
Cc09_g05170 Coffea canephora HOM05D003515 ORTHO05D004347 2.1e-17 94.0 262 34.0
Thecc.02G003700 Theobroma cacao HOM05D003515 ORTHO05D004347 2.7e-17 93.6 255 34.5
Haze_05267 Corylus avellana HOM05D003515 ORTHO05D004347 5.1e-16 89.4 288 30.6
RcHm_v2.0_Chr5g0021201 Rosa chinensis HOM05D003515 ORTHO05D004347 5.6e-15 85.9 277 30.7
FvH4_3g13010 Fragaria vesca HOM05D003515 ORTHO05D004347 2.1e-14 84.0 268 30.6
FAN11G3814 Fragaria x ananassa HOM05D003515 ORTHO05D004347 2.1e-14 84.0 268 30.6
RcHm_v2.0_Chr5g0021121 Rosa chinensis HOM05D003515 ORTHO05D004347 4.7e-14 82.8 267 31.5
TAR624G0550 Trochodendron aralioides HOM05D003515 ORTHO05D004347 1.4e-10 71.2 217 32.7
GSVIVG01012151001 Vitis vinifera HOM05D003515 ORTHO05D004347 5.4e-10 69.3 309 27.2
Potri.003G152600 Populus trichocarpa HOM05D003515 ORTHO05D004347 2.1e-09 67.4 249 28.5
Hma1.2p1_0088F.1_g045250 Hydrangea macrophylla HOM05D003515 ORTHO05D004347 1.1e-07 61.6 108 40.7
FAN16G1075 Fragaria x ananassa HOM05D003515 ORTHO05D004347 1.9e-07 60.8 278 27.7
RcHm_v2.0_Chr5g0021171 Rosa chinensis HOM05D003515 ORTHO05D004347 1.9e-07 60.8 186 31.2
Glyma.08G088900 Glycine max HOM05D003515 ORTHO05D004347 2.5e-07 60.5 262 30.2
Gorai.009G257800 Gossypium raimondii HOM05D003515 ORTHO05D004347 2.5e-07 60.5 242 30.6
FAN21G1878 Fragaria x ananassa HOM05D003515 ORTHO05D004347 4.3e-07 59.7 268 27.6
Prupe.4G118000 Prunus persica HOM05D003515 ORTHO05D004347 4.3e-07 59.7 269 29.0
HanXRQChr14g0439721 Helianthus annuus HOM05D003515 ORTHO05D004347 5.6e-07 59.3 233 27.5
ECA238G0584 Erigeron canadensis HOM05D003515 ORTHO05D004347 9.6e-07 58.5 231 27.7
Lalb_Chr13g0293411 Lupinus albus HOM05D003515 ORTHO05D004347 2.1e-06 57.4 252 26.6
Ca_18232_v3 Cicer arietinum L. HOM05D003515 ORTHO05D004347 2.8e-06 57.0 251 30.3
Gohir.D05G247100 Gossypium hirsutum HOM05D003515 ORTHO05D004347 2.8e-06 57.0 237 30.0


User provided reference genes

Program Settings