Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0039147 Camellia sinensis var. sinensis HOM05D001750 ORTHO05D001825 4.7e-111 404.4 189 100.0
Hma1.2p1_0034F.1_g021420 Hydrangea macrophylla HOM05D001750 ORTHO05D001825 6.8e-86 320.9 187 84.0
Sed0023702 Sechium edule HOM05D001750 ORTHO05D001825 1.8e-83 312.8 187 82.4
Cfa022996 Carpinus fangiana HOM05D001750 ORTHO05D001825 4.2e-80 301.6 187 80.2
Gorai.001G163400 Gossypium raimondii HOM05D001750 ORTHO05D001825 3.8e-73 278.5 188 76.6
SalBow1G5977 Salvia bowleyana HOM05D001750 ORTHO05D001825 1.4e-54 216.9 170 65.9
Ah.10g027940 Amaranthus hybridus HOM05D001750 ORTHO05D001825 2.4e-51 206.1 110 90.0
Ah.10g028650 Amaranthus hybridus HOM05D001750 ORTHO05D001825 2.4e-51 206.1 110 90.0
FAN14G0206 Fragaria x ananassa HOM05D001750 ORTHO05D001825 5.6e-48 194.9 114 84.2
SGA_v2.0_scaffold245G44452 Striga asiatica HOM05D001750 ORTHO05D001825 1.9e-40 169.9 114 74.6
Ca_15051_v3 Cicer arietinum L. HOM05D001750 ORTHO05D010080 9.9e-37 157.5 151 55.6
ECA039G0010 Erigeron canadensis HOM05D001750 ORTHO05D001825 1.2e-34 150.6 68 98.5
SabraMtG0002600 Salix brachista HOM05D001750 ORTHO05D001825 2.5e-32 142.9 76 89.5
Ca_22167_v3 Cicer arietinum L. HOM05D001750 ORTHO05D001825 1.3e-28 130.6 73 83.6
Ca_22168_v3 Cicer arietinum L. HOM05D001750 ORTHO05D001825 1.3e-28 130.6 73 83.6
Dinv06672 Davidia involucrata HOM05D001750 ORTHO05D001825 6.4e-28 128.3 187 45.5
Dinv18904 Davidia involucrata HOM05D001750 ORTHO05D001825 6.4e-28 128.3 187 45.5
Actinidia34923 Actinidia chinensis HOM05D001750 ORTHO05D001825 5.1e-25 118.6 187 43.3
arahy.Tifrunner.gnm1.ann1.KHE2M7 Arachis hypogaea HOM05D001750 ORTHO05D001825 9.6e-24 114.4 187 42.8
Hund27557 Selenicereus undatus HOM05D001750 ORTHO05D007069 4.8e-23 112.1 187 42.2
Hund27692 Selenicereus undatus HOM05D001750 ORTHO05D001825 4.8e-23 112.1 187 42.2
Hund29121 Selenicereus undatus HOM05D001750 ORTHO05D001825 4.8e-23 112.1 187 42.2
QL06p024879 Quercus lobata HOM05D001750 ORTHO05D001825 7.9e-18 94.7 185 37.3
Sc08g0004620 Simmondsia chinensis HOM05D001750 ORTHO05D001825 2.5e-16 89.7 43 95.3
Sc08g0004910 Simmondsia chinensis HOM05D001750 ORTHO05D001825 2.5e-16 89.7 43 95.3
CAN.G1159.8 Capsicum annuum HOM05D001750 ORTHO05D001825 9.6e-16 87.8 43 93.0
arahy.Tifrunner.gnm1.ann1.BE3YYP Arachis hypogaea HOM05D001750 ORTHO05D001825 2.1e-15 86.7 47 87.2
Nitab4.5_0001788g0200 Nicotiana tabacum HOM05D001750 ORTHO05D001825 4.0e-14 82.4 43 88.4
arahy.Tifrunner.gnm1.ann1.KJ11LV Arachis hypogaea HOM05D001750 ORTHO05D001825 3.8e-12 75.9 34 100.0
Sopen04g020440 Solanum pennellii HOM05D000017 ORTHO05D001349 8.4e-12 74.7 43 81.4
Peaxi162Scf01267g00005 Petunia axillaris HOM05D005210 ORTHO05D010080 9.3e-11 71.2 33 97.0
Nitab4.5_0000172g0080 Nicotiana tabacum HOM05D001750 ORTHO05D001825 3.9e-09 65.9 37 81.1
Nitab4.5_0000299g0070 Nicotiana tabacum HOM05D005210 ORTHO05D010080 1.1e-08 64.3 33 81.8
ClCG09G014590 Citrullus lanatus HOM05D001750 ORTHO05D001825 3.3e-08 62.8 50 68.0
Lj2A1235G104 Lonicera japonica HOM05D001750 ORTHO05D001825 3.3e-08 62.8 64 54.7


User provided reference genes

Program Settings