Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0039078 Camellia sinensis var. sinensis HOM05D000770 ORTHO05D024734 1.7e-37 158.7 74 100.0
CSS0042418 Camellia sinensis var. sinensis HOM05D000770 ORTHO05D024734 2.6e-33 144.8 74 93.2
CSS0009090 Camellia sinensis var. sinensis HOM05D000770 ORTHO05D024734 2.2e-32 141.7 74 91.9
Dinv40546 Davidia involucrata HOM05D000770 ORTHO05D000586 3.4e-17 91.3 66 65.2
TAR626G1074 Trochodendron aralioides HOM05D000770 ORTHO05D000586 3.4e-17 91.3 66 65.2
Rhsim02G0128500 Rhododendron simsii HOM05D000770 ORTHO05D000586 1.3e-16 89.4 70 70.0
Glyma.15G073100 Glycine max HOM05D000770 ORTHO05D000586 1.4e-15 85.9 66 59.1
Phvul.006G186600 Phaseolus vulgaris HOM05D000770 ORTHO05D000586 1.9e-15 85.5 66 59.1
VMungo0540G1272 Vigna mungo HOM05D000770 ORTHO05D000586 3.2e-15 84.7 66 57.6
Cpa.g.sc27.53 Carica papaya HOM05D000770 ORTHO05D000586 4.2e-15 84.3 66 63.6
Aqoxy1G02514 Aquilegia oxysepala HOM05D000770 ORTHO05D000586 4.6e-14 80.9 66 59.1
Nn1g06584 Nelumbo nucifera HOM05D000770 ORTHO05D000586 7.9e-14 80.1 66 59.1
Oeu050842.1 Olea europaea HOM05D000770 ORTHO05D000586 7.9e-14 80.1 67 56.7
Oeu026013.1 Olea europaea HOM05D000770 ORTHO05D000586 1.0e-13 79.7 67 59.7
Hma1.2p1_0881F.1_g232070 Hydrangea macrophylla HOM05D000770 ORTHO05D000586 1.8e-13 79.0 66 54.5
Ciclev10018115m.g Citrus clementina HOM05D000770 ORTHO05D000586 3.0e-13 78.2 66 56.1
Lalb_Chr15g0089861 Lupinus albus HOM05D000770 ORTHO05D000586 1.1e-12 76.3 67 55.2
Haze_06485 Corylus avellana HOM05D002535 ORTHO05D008858 2.5e-12 75.1 66 51.5
COL.COLO4_31492 Corchorus olitorius HOM05D000770 ORTHO05D000586 3.3e-12 74.7 68 57.4
Lalb_Chr20g0121941 Lupinus albus HOM05D000770 ORTHO05D000586 4.3e-12 74.3 67 50.7
Thecc.06G189500 Theobroma cacao HOM05D000770 ORTHO05D000586 4.3e-12 74.3 68 55.9
TWI38G1179 Tripterygium wilfordii HOM05D000770 ORTHO05D000586 4.3e-12 74.3 67 53.7
Gohir.A10G025000 Gossypium hirsutum HOM05D000770 ORTHO05D000586 7.4e-12 73.6 70 52.9
Peaxi162Scf00461g00017 Petunia axillaris HOM05D000770 ORTHO05D000586 1.3e-11 72.8 69 52.2
Gohir.D10G025700 Gossypium hirsutum HOM05D000770 ORTHO05D000586 1.6e-11 72.4 68 55.9
Gorai.011G027000 Gossypium raimondii HOM05D000770 ORTHO05D000586 1.6e-11 72.4 68 55.9
Oeu005075.2 Olea europaea HOM05D002535 ORTHO05D008858 1.6e-11 72.4 68 51.5
PGSC0003DMG400022388 Solanum tuberosum HOM05D000770 ORTHO05D000586 1.6e-11 72.4 66 54.5
Atru.chr10.1902 Acer truncatum HOM05D000770 ORTHO05D000586 2.8e-11 71.6 67 53.7
arahy.Tifrunner.gnm1.ann1.I6EE1A Arachis hypogaea HOM05D000770 ORTHO05D000586 8.1e-11 70.1 68 50.0
QL05p039948 Quercus lobata HOM05D000770 ORTHO05D000586 8.1e-11 70.1 66 50.0
CANSAT35G0325 Cannabis sativa HOM05D000770 ORTHO05D000586 1.1e-10 69.7 66 51.5
Duzib235G1319 Durio zibethinus HOM05D000770 ORTHO05D000586 1.1e-10 69.7 68 50.0
arahy.Tifrunner.gnm1.ann1.KPLK3V Arachis hypogaea HOM05D000770 ORTHO05D000586 1.4e-10 69.3 68 50.0
Haze_05739 Corylus avellana HOM05D002535 ORTHO05D024734 1.8e-10 68.9 62 48.4
Nitab4.5_0002158g0070 Nicotiana tabacum HOM05D000770 ORTHO05D000586 2.4e-10 68.6 68 50.0
MBI18_g16994_MAGBIO Magnolia biondii HOM05D000770 ORTHO05D000586 5.3e-10 67.4 66 50.0
Cfa000431 Carpinus fangiana HOM05D002535 ORTHO05D008858 9.0e-10 66.6 62 51.6
Nitab4.5_0007855g0050 Nicotiana tabacum HOM05D000770 ORTHO05D000586 9.0e-10 66.6 68 50.0
PSO675G7755 Papaver somniferum HOM05D000770 ORTHO05D000586 9.0e-10 66.6 70 52.9
Sopen02g023240 Solanum pennellii HOM05D000770 ORTHO05D000586 9.0e-10 66.6 68 48.5
Prupe.4G045300 Prunus persica HOM05D000770 ORTHO05D000586 1.2e-09 66.2 61 54.1
Solyc02g078380.3 Solanum lycopersicum HOM05D000770 ORTHO05D000586 1.5e-09 65.9 68 48.5
Migut.M01150 Erythranthe guttata HOM05D000770 ORTHO05D000586 5.8e-09 63.9 67 50.7
RcHm_v2.0_Chr5g0008201 Rosa chinensis HOM05D000770 ORTHO05D000586 1.3e-08 62.8 66 45.5
CAN.G1164.17 Capsicum annuum HOM05D000770 ORTHO05D000586 2.2e-08 62.0 66 47.0
MD00G1095400 Malus domestica HOM05D000770 ORTHO05D000586 4.9e-08 60.8 61 47.5
HanXRQChr04g0124091 Helianthus annuus HOM05D000770 ORTHO05D000586 1.6e-06 55.8 66 43.9


User provided reference genes

Program Settings