Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0039058 Camellia sinensis var. sinensis HOM05D005385 ORTHO05D006768 1.2e-169 599.7 301 100.0
CSS0010990 Camellia sinensis var. sinensis HOM05D005385 ORTHO05D006768 8.2e-118 427.6 318 74.2
Dinv39728 Davidia involucrata HOM05D005385 ORTHO05D006768 2.2e-70 270.0 321 51.1
CSS0011006 Camellia sinensis var. sinensis HOM05D005385 ORTHO05D006768 4.9e-70 268.9 293 56.7
Rhsim06G0165400 Rhododendron simsii HOM05D005385 ORTHO05D006768 1.5e-66 257.3 321 51.7
vmacro12184 Vaccinium macrocarpon HOM05D005385 ORTHO05D006768 6.8e-64 248.4 321 49.8
Dinv08748 Davidia involucrata HOM05D005385 ORTHO05D006768 6.0e-60 235.3 320 47.8
Actinidia09739 Actinidia chinensis HOM05D005385 ORTHO05D006768 1.3e-59 234.2 252 55.2
Hma1.2p1_0895F.1_g233780 Hydrangea macrophylla HOM05D005385 ORTHO05D006768 7.5e-55 218.4 299 46.5
Cfa014342 Carpinus fangiana HOM05D005385 ORTHO05D006768 1.3e-43 181.0 318 40.3
Haze_12803 Corylus avellana HOM05D005385 ORTHO05D006768 5.1e-43 179.1 318 39.6
QL08p031674 Quercus lobata HOM05D005385 ORTHO05D006768 3.6e-41 172.9 318 39.3
CiPaw.03G158000 Carya illinoinensis HOM05D005385 ORTHO05D006768 2.7e-36 156.8 254 39.4
Rhsim06G0165100 Rhododendron simsii HOM05D005385 ORTHO05D006768 2.5e-34 150.2 175 54.9
Potri.002G227200 Populus trichocarpa HOM05D005385 ORTHO05D006768 1.6e-33 147.5 328 34.5
Rhsim06G0164700 Rhododendron simsii HOM05D005385 ORTHO05D006768 6.2e-33 145.6 287 39.7
RhsimUnG0010700 Rhododendron simsii HOM05D005385 ORTHO05D006768 6.2e-33 145.6 287 39.7
GSVIVG01030472001 Vitis vinifera HOM05D005385 ORTHO05D006768 3.1e-32 143.3 323 34.7
Thecc.01G177600 Theobroma cacao HOM05D005385 ORTHO05D006768 5.4e-29 132.5 333 32.4
Prupe.3G214000 Prunus persica HOM05D005385 ORTHO05D006768 1.2e-28 131.3 344 34.6
TAR627G0869 Trochodendron aralioides HOM05D005385 ORTHO05D006768 1.0e-27 128.3 325 33.2
Sabra02G0173800 Salix brachista HOM05D005385 ORTHO05D006768 5.1e-27 125.9 324 33.0
Duzib138G1383 Durio zibethinus HOM05D005385 ORTHO05D006768 8.7e-27 125.2 335 30.7
Manes.12G072400 Manihot esculenta HOM05D005385 ORTHO05D006768 8.7e-27 125.2 348 33.3
Oeu036745.2 Olea europaea HOM05D005385 ORTHO05D006768 3.3e-26 123.2 272 35.3
CANSAT64G0851 Cannabis sativa HOM05D005385 ORTHO05D006768 1.1e-24 118.2 311 34.4
PGR142G3338 Punica granatum HOM05D005385 ORTHO05D006768 1.8e-24 117.5 291 32.3
Lj8A127T46 Lonicera japonica HOM05D005385 ORTHO05D006768 2.4e-24 117.1 420 28.6
Eucgr.K00777 Eucalyptus grandis HOM05D005385 ORTHO05D006768 4.0e-24 116.3 314 30.3
MSTRG.14146 Avicennia marina HOM05D005385 ORTHO05D006768 2.6e-23 113.6 341 31.4
Cc05_g03620 Coffea canephora HOM05D005385 ORTHO05D006768 1.3e-22 111.3 405 29.6
Gohir.A07G081700 Gossypium hirsutum HOM05D005385 ORTHO05D006768 2.2e-22 110.5 308 30.2
Migut.H01229 Erythranthe guttata HOM05D005385 ORTHO05D006768 6.4e-22 109.0 381 28.3
COL.COLO4_21830 Corchorus olitorius HOM05D005385 ORTHO05D006768 1.1e-21 108.2 333 29.4
SGA_v2.0_scaffold159G37574 Striga asiatica HOM05D005385 ORTHO05D006768 1.1e-21 108.2 292 31.8
FAN14G3333 Fragaria x ananassa HOM05D005385 ORTHO05D006768 4.2e-21 106.3 353 30.9
RcHm_v2.0_Chr2g0158651 Rosa chinensis HOM05D005385 ORTHO05D006768 7.1e-21 105.5 337 29.4
Gohir.D07G088200 Gossypium hirsutum HOM05D005385 ORTHO05D006768 9.3e-21 105.1 309 29.4
FvH4_6g42760 Fragaria vesca HOM05D005385 ORTHO05D006768 2.1e-20 104.0 353 30.6
Gorai.001G094400 Gossypium raimondii HOM05D005385 ORTHO05D006768 2.1e-20 104.0 309 29.4
FAN02G3845 Fragaria x ananassa HOM05D005385 ORTHO05D006768 6.0e-20 102.4 353 29.2
FAN05G0986 Fragaria x ananassa HOM05D005385 ORTHO05D006768 2.3e-19 100.5 351 30.5
TWI36G1417 Tripterygium wilfordii HOM05D005385 ORTHO05D006768 8.7e-19 98.6 438 26.7
Sopen07g025370 Solanum pennellii HOM05D005385 ORTHO05D006768 1.1e-18 98.2 388 27.8
FAN09G2639 Fragaria x ananassa HOM05D005385 ORTHO05D006768 1.9e-18 97.4 349 29.2
Solyc07g049750.3 Solanum lycopersicum HOM05D005385 ORTHO05D006768 1.9e-18 97.4 388 28.1
DCAR_021157 Daucus carota HOM05D005385 ORTHO05D006768 3.3e-18 96.7 166 34.9
Ciclev10014304m.g Citrus clementina HOM05D005385 ORTHO05D006768 4.3e-18 96.3 192 38.5
Sed0009256 Sechium edule HOM05D005385 ORTHO05D006768 7.4e-18 95.5 323 26.6
PGSC0003DMG400001080 Solanum tuberosum HOM05D005385 ORTHO05D006768 2.8e-17 93.6 389 27.2
SalBow1G8666 Salvia bowleyana HOM05D005385 ORTHO05D006768 3.7e-17 93.2 418 27.8
Duzib133G0609 Durio zibethinus HOM05D005385 ORTHO05D006768 6.9e-16 89.0 269 27.9
Nitab4.5_0000130g0270 Nicotiana tabacum HOM05D005385 ORTHO05D006768 4.5e-15 86.3 437 27.5
ClCG02G009040 Citrullus lanatus HOM05D005385 ORTHO05D006768 5.8e-15 85.9 313 27.2
CsaV3_2G034680 Cucumis sativus L. HOM05D005385 ORTHO05D006768 5.8e-15 85.9 319 26.3
SalBow1G7937 Salvia bowleyana HOM05D005385 ORTHO05D006768 7.6e-15 85.5 418 26.6
Sed0009527 Sechium edule HOM05D005385 ORTHO05D006768 1.3e-14 84.7 317 27.8
MELO3C019298.2 Cucumis melo HOM05D005385 ORTHO05D006768 2.9e-14 83.6 317 27.1
Nitab4.5_0008855g0010 Nicotiana tabacum HOM05D005385 ORTHO05D006768 1.1e-13 81.6 442 26.0
DCAR_021158 Daucus carota HOM05D005385 ORTHO05D006768 5.5e-13 79.3 168 31.5
Lj1A770T48 Lonicera japonica HOM05D005385 ORTHO05D006768 7.1e-13 79.0 70 60.0
Lj1A781G48 Lonicera japonica HOM05D005385 ORTHO05D006768 2.7e-12 77.0 70 57.1
Phvul.003G071200 Phaseolus vulgaris HOM05D005385 ORTHO05D006768 3.5e-12 76.6 213 32.4
TWI75G1493 Tripterygium wilfordii HOM05D005385 ORTHO05D006768 4.6e-12 76.3 431 26.9
Aqoxy5G00128 Aquilegia oxysepala HOM05D005385 ORTHO05D006768 1.3e-11 74.7 328 27.4
Glyma.18G128300 Glycine max HOM05D005385 ORTHO05D006768 3.0e-11 73.6 287 27.9
AL1G14860 Arabidopsis lyrata HOM05D005385 ORTHO05D006768 6.7e-11 72.4 344 26.5
Lj4g0021844 Lotus japonicus HOM05D005385 ORTHO05D006768 6.7e-11 72.4 328 27.1
PSO384G2490 Papaver somniferum HOM05D005385 ORTHO05D006768 8.7e-11 72.0 290 27.9
CAN.G290.3 Capsicum annuum HOM05D005385 ORTHO05D006768 1.5e-10 71.2 395 25.6
MD09G1071600 Malus domestica HOM05D005385 ORTHO05D006768 1.5e-10 71.2 279 30.8
MBI14_g48057_MAGBIO Magnolia biondii HOM05D005385 ORTHO05D006768 1.9e-10 70.9 302 25.8
PSO339G4227 Papaver somniferum HOM05D005385 ORTHO05D006768 1.9e-10 70.9 291 27.8
Nitab4.5_0004549g0030 Nicotiana tabacum HOM05D005385 ORTHO05D006768 4.3e-10 69.7 195 32.3
Lalb_Chr10g0107231 Lupinus albus HOM05D005385 ORTHO05D006768 2.1e-09 67.4 120 35.8
Medtr8g061890 Medicago truncatula HOM05D005385 ORTHO05D006768 2.1e-09 67.4 286 28.3
Ca_22840_v3 Cicer arietinum L. HOM05D005385 ORTHO05D006768 2.8e-09 67.0 138 39.1
Duzib133G0129 Durio zibethinus HOM05D005385 ORTHO05D006768 4.8e-09 66.2 167 35.9
VMungo0251G0036 Vigna mungo HOM05D005385 ORTHO05D006768 6.2e-09 65.9 213 31.9
Psat4g129200 Pisum sativum HOM05D005385 ORTHO05D006768 8.2e-09 65.5 287 27.2
TPR.G29371 Trifolium pratense HOM05D005385 ORTHO05D006768 8.2e-09 65.5 284 27.1
MD17G1100100 Malus domestica HOM05D005385 ORTHO05D006768 1.1e-08 65.1 167 34.7
Carub.0001s0438 Capsella rubella HOM05D005385 ORTHO05D006768 5.3e-08 62.8 193 32.6
AT4G20720 Arabidopsis thaliana HOM05D005385 ORTHO05D006768 1.2e-07 61.6 374 25.4
Lsat_1_v5_gn_7_93260 Lactuca sativa HOM05D005385 ORTHO05D006768 1.5e-07 61.2 348 25.9
THA.LOC104801549 Tarenaya hassleriana HOM05D005385 ORTHO05D006768 1.5e-07 61.2 160 30.6
BcaC05g24419 Brassica carinata HOM05D005385 ORTHO05D006768 2.0e-07 60.8 71 50.7
C05p03280 Brassica napus HOM05D005385 ORTHO05D006768 2.0e-07 60.8 71 50.7
BolC5t29109H Brassica oleracea HOM05D005385 ORTHO05D006768 2.0e-07 60.8 71 50.7
Glyma.08G294700 Glycine max HOM05D005385 ORTHO05D006768 3.4e-07 60.1 287 28.2
AT1G05090 Arabidopsis thaliana HOM05D005385 ORTHO05D006768 5.8e-07 59.3 374 24.9
Duzib211G0060 Durio zibethinus HOM05D005385 ORTHO05D006768 5.8e-07 59.3 168 33.9
Peaxi162Scf00007g00224 Petunia axillaris HOM05D005385 ORTHO05D006768 5.8e-07 59.3 430 22.8
Sc21g0001240 Simmondsia chinensis HOM05D005385 ORTHO05D006768 5.8e-07 59.3 215 27.9
CARHR004550 Cardamine hirsuta HOM05D005385 ORTHO05D006768 7.6e-07 58.9 323 27.2
Atru.chr6.3225 Acer truncatum HOM05D005385 ORTHO05D006768 1.0e-06 58.5 193 30.6
Nitab4.5_0004549g0040 Nicotiana tabacum HOM05D005385 ORTHO05D006768 2.9e-06 57.0 104 40.4


User provided reference genes

Program Settings