Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0039055 Camellia sinensis var. sinensis HOM05D058272 ORTHO05D109206 2.2e-75 285.4 133 100.0
CSS0045134 Camellia sinensis var. sinensis HOM05D058272 ORTHO05D109697 6.3e-62 240.7 133 85.7
CSS0035898 Camellia sinensis var. sinensis HOM05D002358 ORTHO05D002454 1.5e-34 149.8 142 59.9
CSS0021433 Camellia sinensis var. sinensis HOM05D002358 ORTHO05D002454 5.5e-34 147.9 132 60.6
CSS0018472 Camellia sinensis var. sinensis HOM05D002358 ORTHO05D002454 5.0e-27 124.8 114 59.6
CSS0014457 Camellia sinensis var. sinensis HOM05D002358 ORTHO05D002454 9.4e-26 120.6 132 53.0
CSS0015709 Camellia sinensis var. sinensis HOM05D002358 ORTHO05D002454 2.2e-22 109.4 113 55.8
CSS0001237 Camellia sinensis var. sinensis HOM05D002358 ORTHO05D002454 8.9e-16 87.4 110 48.2
CSS0005041 Camellia sinensis var. sinensis HOM05D002358 ORTHO05D002454 8.9e-16 87.4 110 48.2
Dinv05446 Davidia involucrata HOM05D002358 ORTHO05D002454 3.5e-12 75.5 112 40.2
Hma1.2p1_1768F.1_g301580 Hydrangea macrophylla HOM05D002358 ORTHO05D002454 1.3e-11 73.6 114 41.2
Hma1.2p1_0328F.1_g126810 Hydrangea macrophylla HOM05D002358 ORTHO05D002454 3.9e-11 72.0 114 40.4
Dinv39703 Davidia involucrata HOM05D002358 ORTHO05D002454 3.3e-10 68.9 112 37.5
CAN.G80.41 Capsicum annuum HOM05D002358 ORTHO05D002454 4.3e-10 68.6 104 42.3
Nitab4.5_0000631g0130 Nicotiana tabacum HOM05D002358 ORTHO05D002454 1.0e-08 63.9 114 40.4
CSS0040511 Camellia sinensis var. sinensis HOM05D002358 ORTHO05D002454 1.4e-08 63.5 35 80.0
Nitab4.5_0003509g0050 Nicotiana tabacum HOM05D002358 ORTHO05D002454 1.4e-08 63.5 109 38.5
PGSC0003DMG400008738 Solanum tuberosum HOM05D002358 ORTHO05D002454 1.8e-08 63.2 105 37.1
Peaxi162Scf00007g00935 Petunia axillaris HOM05D002358 ORTHO05D002454 4.0e-08 62.0 142 37.3
CSS0010929 Camellia sinensis var. sinensis HOM05D002358 ORTHO05D002454 5.2e-08 61.6 32 84.4
CAN.G846.7 Capsicum annuum HOM05D002358 ORTHO05D002454 6.8e-08 61.2 94 42.6
CSS0046815 Camellia sinensis var. sinensis HOM05D002358 ORTHO05D002454 8.9e-08 60.8 25 100.0
Nitab4.5_0000006g0130 Nicotiana tabacum HOM05D002358 ORTHO05D002454 1.2e-07 60.5 96 43.8
Peaxi162Scf00462g00028 Petunia axillaris HOM05D002358 ORTHO05D002454 1.2e-07 60.5 97 43.3
GSVIVG01030602001 Vitis vinifera HOM05D000109 ORTHO05D000520 1.5e-07 60.1 89 46.1
Solyc12g005840.2 Solanum lycopersicum HOM05D002358 ORTHO05D002454 3.4e-07 58.9 90 38.9
Sopen12g001790 Solanum pennellii HOM05D002358 ORTHO05D002454 3.4e-07 58.9 90 38.9
Peaxi162Scf00932g00518 Petunia axillaris HOM05D002358 ORTHO05D002454 4.4e-07 58.5 93 40.9
Gorai.008G173200 Gossypium raimondii HOM05D002358 ORTHO05D002454 5.8e-07 58.2 106 39.6
TAR629G1843 Trochodendron aralioides HOM05D002358 ORTHO05D002454 5.8e-07 58.2 113 35.4
vmacro12209 Vaccinium macrocarpon HOM05D002358 ORTHO05D002454 7.5e-07 57.8 76 43.4
Carub.0003s2175 Capsella rubella HOM05D002358 ORTHO05D002454 9.8e-07 57.4 86 41.9
Oeu021398.1 Olea europaea HOM05D002358 ORTHO05D002454 9.8e-07 57.4 109 39.4
MD17G1096000 Malus domestica HOM05D002358 ORTHO05D002454 1.7e-06 56.6 67 44.8
Prupe.3G217900 Prunus persica HOM05D000109 ORTHO05D000520 1.7e-06 56.6 80 43.8
CSS0030668 Camellia sinensis var. sinensis HOM05D002358 ORTHO05D002454 2.2e-06 56.2 35 74.3
Solyc05g045660.3 Solanum lycopersicum HOM05D002358 ORTHO05D002454 2.2e-06 56.2 83 44.6
Sopen05g026970 Solanum pennellii HOM05D002358 ORTHO05D002454 2.2e-06 56.2 83 44.6
PGSC0003DMG400005268 Solanum tuberosum HOM05D002358 ORTHO05D002454 2.2e-06 56.2 83 44.6
AT3G21700 Arabidopsis thaliana HOM05D002358 ORTHO05D002454 2.9e-06 55.8 86 41.9
Duzib251G0132 Durio zibethinus HOM05D002358 ORTHO05D002454 2.9e-06 55.8 104 37.5
MD09G1069800 Malus domestica HOM05D002358 ORTHO05D002454 2.9e-06 55.8 67 44.8
Nitab4.5_0002137g0160 Nicotiana tabacum HOM05D002358 ORTHO05D002454 2.9e-06 55.8 111 38.7
MSTRG.12285 Avicennia marina HOM05D002358 ORTHO05D002454 3.7e-06 55.5 112 33.0
Lsat_1_v5_gn_7_92081 Lactuca sativa HOM05D002358 ORTHO05D002454 3.7e-06 55.5 95 37.9
CAN.G37.12 Capsicum annuum HOM05D002358 ORTHO05D002454 4.9e-06 55.1 115 33.9
DCAR_021178 Daucus carota HOM05D002358 ORTHO05D002454 8.3e-06 54.3 88 37.5
Lj8A167G46 Lonicera japonica HOM05D002358 ORTHO05D002454 8.3e-06 54.3 110 37.3


User provided reference genes

Program Settings