Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0039021 Camellia sinensis var. sinensis HOM05D000173 ORTHO05D109923 3.4e-58 228.0 109 100.0
CSS0038764 Camellia sinensis var. sinensis HOM05D000083 ORTHO05D002968 3.0e-09 65.5 39 79.5
Phvul.001G060800 Phaseolus vulgaris HOM05D000173 ORTHO05D006747 1.4e-06 56.6 53 52.8
Cc02_g29690 Coffea canephora HOM05D000173 ORTHO05D006747 3.1e-06 55.5 52 51.9
Lsat_1_v5_gn_2_94360 Lactuca sativa HOM05D000173 ORTHO05D006747 3.1e-06 55.5 52 53.8
PSO017G4469 Papaver somniferum HOM05D000173 ORTHO05D006747 3.1e-06 55.5 52 53.8
PSO478G1649 Papaver somniferum HOM05D000173 ORTHO05D006747 3.1e-06 55.5 52 53.8
Peaxi162Scf00420g00638 Petunia axillaris HOM05D000173 ORTHO05D006747 3.1e-06 55.5 52 53.8
Potri.001G326600 Populus trichocarpa HOM05D000173 ORTHO05D006747 3.1e-06 55.5 52 53.8
Sabra16G0209100 Salix brachista HOM05D000173 ORTHO05D006747 3.1e-06 55.5 52 53.8
SEGI_18631 Sequoiadendron giganteum HOM05D000173 ORTHO05D006747 3.1e-06 55.5 52 53.8
Atru.chr6.2602 Acer truncatum HOM05D000173 ORTHO05D006747 4.0e-06 55.1 52 51.9
Actinidia37741 Actinidia chinensis HOM05D000173 ORTHO05D006747 4.0e-06 55.1 52 51.9
ATR0582G346 Amborella trichopoda HOM05D000173 ORTHO05D006747 4.0e-06 55.1 52 51.9
Aqoxy3G01650 Aquilegia oxysepala HOM05D000173 ORTHO05D006747 4.0e-06 55.1 52 51.9
arahy.Tifrunner.gnm1.ann1.AD81Q2 Arachis hypogaea HOM05D000173 ORTHO05D006747 4.0e-06 55.1 52 51.9
arahy.Tifrunner.gnm1.ann1.K2ZGEY Arachis hypogaea HOM05D000173 ORTHO05D006747 4.0e-06 55.1 52 51.9
BcaB04g19422 Brassica carinata HOM05D000173 ORTHO05D006747 4.0e-06 55.1 52 51.9
BcaC06g31028 Brassica carinata HOM05D000173 ORTHO05D006747 4.0e-06 55.1 54 51.9
A09p03230 Brassica napus HOM05D000173 ORTHO05D006747 4.0e-06 55.1 52 51.9
C09p03430 Brassica napus HOM05D000173 ORTHO05D006747 4.0e-06 55.1 52 51.9
BolC9t53264H Brassica oleracea HOM05D000173 ORTHO05D006747 4.0e-06 55.1 52 51.9
BraA09t35961Z Brassica rapa HOM05D000173 ORTHO05D006747 4.0e-06 55.1 52 51.9
CAN.G473.125 Capsicum annuum HOM05D000173 ORTHO05D006747 4.0e-06 55.1 52 51.9
Cfa007203 Carpinus fangiana HOM05D000173 ORTHO05D006747 4.0e-06 55.1 52 51.9
CiPaw.04G039700 Carya illinoinensis HOM05D000173 ORTHO05D006747 4.0e-06 55.1 52 51.9
CDE05G0318 Ceratophyllum demersum HOM05D000173 ORTHO05D006747 4.0e-06 55.1 52 51.9
Ca_06619_v3 Cicer arietinum L. HOM05D000173 ORTHO05D006747 4.0e-06 55.1 52 51.9
Ciclev10015545m.g Citrus clementina HOM05D000173 ORTHO05D006747 4.0e-06 55.1 52 51.9
Cc03_g14290 Coffea canephora HOM05D000173 ORTHO05D006747 4.0e-06 55.1 52 51.9
Haze_14903 Corylus avellana HOM05D000173 ORTHO05D006747 4.0e-06 55.1 52 51.9
CsaV3_2G033980 Cucumis sativus L. HOM05D000173 ORTHO05D006747 4.0e-06 55.1 52 51.9
Dinv33317 Davidia involucrata HOM05D000173 ORTHO05D006747 4.0e-06 55.1 52 51.9
Duzib147G0054 Durio zibethinus HOM05D000173 ORTHO05D006747 4.0e-06 55.1 52 51.9
Duzib264G0782 Durio zibethinus HOM05D000173 ORTHO05D006747 4.0e-06 55.1 52 51.9
ECA238G2010 Erigeron canadensis HOM05D000173 ORTHO05D006747 4.0e-06 55.1 52 51.9
Thhalv10004377m.g Eutrema salsugineum HOM05D000173 ORTHO05D006747 4.0e-06 55.1 52 51.9
Glyma.16G053400 Glycine max HOM05D000173 ORTHO05D006747 4.0e-06 55.1 52 51.9
Glyma.19G095900 Glycine max HOM05D000173 ORTHO05D006747 4.0e-06 55.1 52 51.9
Gohir.A07G231900 Gossypium hirsutum HOM05D000173 ORTHO05D006747 4.0e-06 55.1 52 51.9
Gohir.D07G239100 Gossypium hirsutum HOM05D000173 ORTHO05D006747 4.0e-06 55.1 52 51.9
Gorai.001G275200 Gossypium raimondii HOM05D000173 ORTHO05D006747 4.0e-06 55.1 52 51.9
HanXRQChr14g0451231 Helianthus annuus HOM05D000173 ORTHO05D006747 4.0e-06 55.1 52 51.9
Hma1.2p1_0525F.1_g172580 Hydrangea macrophylla HOM05D000173 ORTHO05D006747 4.0e-06 55.1 52 51.9
Lj7A612G78 Lonicera japonica HOM05D000173 ORTHO05D006747 4.0e-06 55.1 52 51.9
Lj1g0002127 Lotus japonicus HOM05D000173 ORTHO05D006747 4.0e-06 55.1 52 51.9
MD09G1007700 Malus domestica HOM05D000173 ORTHO05D006747 4.0e-06 55.1 52 51.9
MD17G1011600 Malus domestica HOM05D000173 ORTHO05D006747 4.0e-06 55.1 52 51.9
Manes.04G088100 Manihot esculenta HOM05D000173 ORTHO05D006747 4.0e-06 55.1 52 51.9
Medtr7g027185 Medicago truncatula HOM05D000173 ORTHO05D006747 4.0e-06 55.1 52 51.9
Nn3g16375 Nelumbo nucifera HOM05D000173 ORTHO05D006747 4.0e-06 55.1 52 51.9
Nitab4.5_0000519g0040 Nicotiana tabacum HOM05D000173 ORTHO05D006747 4.0e-06 55.1 52 51.9
Nitab4.5_0005858g0140 Nicotiana tabacum HOM05D000173 ORTHO05D006747 4.0e-06 55.1 52 51.9
Oeu035207.1 Olea europaea HOM05D000173 ORTHO05D006747 4.0e-06 55.1 52 51.9
Prupe.3G309300 Prunus persica HOM05D000173 ORTHO05D006747 4.0e-06 55.1 52 51.9
QL02p070765 Quercus lobata HOM05D000173 ORTHO05D006747 4.0e-06 55.1 52 51.9
Rhsim08G0041400 Rhododendron simsii HOM05D000173 ORTHO05D006747 4.0e-06 55.1 52 51.9
RcHm_v2.0_Chr2g0176031 Rosa chinensis HOM05D000173 ORTHO05D006747 4.0e-06 55.1 52 51.9
Sp2g16120 Schrenkiella parvula HOM05D000173 ORTHO05D006747 4.0e-06 55.1 52 51.9
Sed0022862 Sechium edule HOM05D000173 ORTHO05D006747 4.0e-06 55.1 52 51.9
Solyc02g094320.3 Solanum lycopersicum HOM05D000173 ORTHO05D006747 4.0e-06 55.1 52 51.9
Sopen02g038960 Solanum pennellii HOM05D000173 ORTHO05D006747 4.0e-06 55.1 52 51.9
PGSC0003DMG400020244 Solanum tuberosum HOM05D000173 ORTHO05D006747 4.0e-06 55.1 52 51.9
THA.LOC104825634 Tarenaya hassleriana HOM05D000173 ORTHO05D006747 4.0e-06 55.1 52 51.9
Thecc.04G041000 Theobroma cacao HOM05D000173 ORTHO05D006747 4.0e-06 55.1 52 51.9
TPR.G8559 Trifolium pratense HOM05D000173 ORTHO05D006747 4.0e-06 55.1 52 51.9
TWI32G0131 Tripterygium wilfordii HOM05D000173 ORTHO05D006747 4.0e-06 55.1 52 51.9
TAR371G0832 Trochodendron aralioides HOM05D000173 ORTHO05D006747 4.0e-06 55.1 52 51.9
vmacro18361 Vaccinium macrocarpon HOM05D000173 ORTHO05D006747 4.0e-06 55.1 52 51.9
VMungo1383G1786 Vigna mungo HOM05D000173 ORTHO05D006747 4.0e-06 55.1 52 51.9
GSVIVG01033049001 Vitis vinifera HOM05D000173 ORTHO05D006747 4.0e-06 55.1 52 51.9
DCAR_000952 Daucus carota HOM05D000173 ORTHO05D006747 6.8e-06 54.3 52 51.9
Phvul.001G060900 Phaseolus vulgaris HOM05D000173 ORTHO05D006747 6.8e-06 54.3 52 51.9
unitig_699.g19569 Utricularia gibba HOM05D000173 ORTHO05D006747 6.8e-06 54.3 52 51.9
COL.COLO4_13298 Corchorus olitorius HOM05D000079 ORTHO05D000211 8.9e-06 53.9 52 50.0


User provided reference genes

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