Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0039010 Camellia sinensis var. sinensis HOM05D008138 ORTHO05D010043 1.9e-66 255.8 135 100.0
CSS0008280 Camellia sinensis var. sinensis HOM05D008138 ORTHO05D010043 4.9e-62 241.1 133 95.5
CSS0048436 Camellia sinensis var. sinensis HOM05D008138 ORTHO05D010043 3.1e-56 221.9 133 88.0
CSS0004656 Camellia sinensis var. sinensis HOM05D008138 ORTHO05D010043 1.2e-55 219.9 129 89.9
CSS0046654 Camellia sinensis var. sinensis HOM05D008138 ORTHO05D010043 1.2e-55 219.9 133 88.0
CSS0015628 Camellia sinensis var. sinensis HOM05D008138 ORTHO05D010043 1.7e-54 216.1 133 86.5
CSS0008104 Camellia sinensis var. sinensis HOM05D008138 ORTHO05D010043 1.9e-53 212.6 133 84.2
CSS0030227 Camellia sinensis var. sinensis HOM05D008138 ORTHO05D010043 3.9e-51 204.9 133 84.2
CSS0025185 Camellia sinensis var. sinensis HOM05D008138 ORTHO05D010043 5.0e-51 204.5 133 84.2
CSS0022599 Camellia sinensis var. sinensis HOM05D008138 ORTHO05D010043 2.6e-47 192.2 133 80.5
GSVIVG01010138001 Vitis vinifera HOM05D008138 ORTHO05D010043 1.4e-13 80.1 94 51.1
Cpa.g.sc53.120 Carica papaya HOM05D008138 ORTHO05D010043 1.9e-13 79.7 113 38.9
Thecc.02G319500 Theobroma cacao HOM05D008138 ORTHO05D010043 3.5e-12 75.5 102 39.2
Sed0002378 Sechium edule HOM05D008138 ORTHO05D010043 6.0e-12 74.7 109 41.3
ClCG05G023400 Citrullus lanatus HOM05D008138 ORTHO05D010043 1.0e-11 73.9 109 41.3
RhsimUnG0062800 Rhododendron simsii HOM05D009462 ORTHO05D013623 1.0e-11 73.9 77 49.4
GSVIVG01010131001 Vitis vinifera HOM05D008138 ORTHO05D010043 1.8e-11 73.2 117 40.2
Potri.013G126000 Populus trichocarpa HOM05D008138 ORTHO05D010043 3.0e-11 72.4 104 44.2
Nn4g23585 Nelumbo nucifera HOM05D008138 ORTHO05D010043 3.9e-11 72.0 97 39.2
Lj2g0015438 Lotus japonicus HOM05D008138 ORTHO05D010043 8.7e-11 70.9 94 42.6
TAR629G0219 Trochodendron aralioides HOM05D008138 ORTHO05D010043 1.1e-10 70.5 113 37.2
Nn3g17583 Nelumbo nucifera HOM05D008138 ORTHO05D010043 1.5e-10 70.1 103 35.9
RhsimUnG0090100 Rhododendron simsii HOM05D009462 ORTHO05D013623 3.3e-10 68.9 80 45.0
RhsimUnG0090300 Rhododendron simsii HOM05D009462 ORTHO05D013623 5.6e-10 68.2 128 34.4
ClCG01G007380 Citrullus lanatus HOM05D022360 ORTHO05D010043 1.3e-09 67.0 110 40.0
Glyma.01G069000 Glycine max HOM05D008138 ORTHO05D010043 1.3e-09 67.0 93 38.7
TAR629G0644 Trochodendron aralioides HOM05D008138 ORTHO05D010043 1.3e-09 67.0 97 39.2
RhsimUnG0175000 Rhododendron simsii HOM05D009462 ORTHO05D013623 1.6e-09 66.6 90 43.3
Sed0011337 Sechium edule HOM05D022360 ORTHO05D010043 1.6e-09 66.6 110 39.1
RhsimUnG0060000 Rhododendron simsii HOM05D009462 ORTHO05D013623 2.1e-09 66.2 73 46.6
Eucgr.G01572 Eucalyptus grandis HOM05D008138 ORTHO05D010043 4.8e-09 65.1 102 38.2
Cpa.g.sc9.360 Carica papaya HOM05D008138 ORTHO05D010043 6.2e-09 64.7 88 38.6
Eucgr.G02403 Eucalyptus grandis HOM05D008138 ORTHO05D010043 6.2e-09 64.7 102 38.2
CsaV3_5G018850 Cucumis sativus L. HOM05D022360 ORTHO05D034989 8.2e-09 64.3 94 41.5
RhsimUnG0204000 Rhododendron simsii HOM05D009462 ORTHO05D013623 1.4e-08 63.5 75 46.7
Glyma.02G125900 Glycine max HOM05D008138 ORTHO05D010043 1.8e-08 63.2 93 35.5
TPR.G2576 Trifolium pratense HOM05D008138 ORTHO05D010043 1.8e-08 63.2 99 37.4
RhsimUnG0216000 Rhododendron simsii HOM05D009462 ORTHO05D013623 5.3e-08 61.6 78 48.7
Eucgr.G01398 Eucalyptus grandis HOM05D008138 ORTHO05D010043 6.9e-08 61.2 98 36.7
CsaV3_5G033610 Cucumis sativus L. HOM05D008138 ORTHO05D010043 9.0e-08 60.8 75 46.7
RhsimUnG0201400 Rhododendron simsii HOM05D009462 ORTHO05D013623 9.0e-08 60.8 119 34.5
Eucgr.B03099 Eucalyptus grandis HOM05D008138 ORTHO05D010043 1.2e-07 60.5 95 38.9
RhsimUnG0216100 Rhododendron simsii HOM05D009462 ORTHO05D013623 1.2e-07 60.5 125 34.4
RhsimUnG0060400 Rhododendron simsii HOM05D009462 ORTHO05D013623 1.5e-07 60.1 120 34.2
RhsimUnG0201100 Rhododendron simsii HOM05D009462 ORTHO05D013623 1.5e-07 60.1 79 43.0
RhsimUnG0203600 Rhododendron simsii HOM05D009462 ORTHO05D013623 1.5e-07 60.1 111 38.7
QL10p055344 Quercus lobata HOM05D008138 ORTHO05D010043 2.0e-07 59.7 98 32.7
Rhsim09G0118100 Rhododendron simsii HOM05D008138 ORTHO05D010043 2.0e-07 59.7 103 37.9
RhsimUnG0222200 Rhododendron simsii HOM05D009462 ORTHO05D013623 2.0e-07 59.7 114 35.1
Dinv01548 Davidia involucrata HOM05D008138 ORTHO05D010043 2.6e-07 59.3 96 37.5
Manes.04G036300 Manihot esculenta HOM05D008138 ORTHO05D010043 3.4e-07 58.9 98 34.7
Manes.04G036500 Manihot esculenta HOM05D008138 ORTHO05D010043 3.4e-07 58.9 106 36.8
Sabra13G0105400 Salix brachista HOM05D008138 ORTHO05D010043 7.6e-07 57.8 104 35.6
Ciclev10022667m.g Citrus clementina HOM05D017113 ORTHO05D019028 2.9e-06 55.8 112 34.8
RhsimUnG0012100 Rhododendron simsii HOM05D009462 ORTHO05D013623 2.9e-06 55.8 119 32.8
RhsimUnG0108600 Rhododendron simsii HOM05D009462 ORTHO05D013623 2.9e-06 55.8 119 32.8
CSS0022846 Camellia sinensis var. sinensis HOM05D008138 ORTHO05D010043 3.8e-06 55.5 97 35.1
Nn1g02864 Nelumbo nucifera HOM05D008138 ORTHO05D010043 3.8e-06 55.5 93 35.5
QL10p055339 Quercus lobata HOM05D008138 ORTHO05D010043 4.9e-06 55.1 98 32.7
Rhsim09G0118800 Rhododendron simsii HOM05D008138 ORTHO05D010043 4.9e-06 55.1 104 36.5
Atru.chr4.1346 Acer truncatum HOM05D058995 ORTHO05D010043 6.5e-06 54.7 102 34.3
Ciclev10022615m.g Citrus clementina HOM05D017113 ORTHO05D019028 8.4e-06 54.3 106 34.9


User provided reference genes

Program Settings