Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0039006 Camellia sinensis var. sinensis HOM05D000311 ORTHO05D000183 2.5e-74 282.0 138 100.0
CSS0031678 Camellia sinensis var. sinensis HOM05D000311 ORTHO05D000183 7.0e-32 141.0 128 60.2
CSS0044420 Camellia sinensis var. sinensis HOM05D000311 ORTHO05D000183 4.2e-29 131.7 97 74.2
CSS0000641 Camellia sinensis var. sinensis HOM05D000311 ORTHO05D000183 7.5e-26 120.9 81 77.8
CSS0006016 Camellia sinensis var. sinensis HOM05D000311 ORTHO05D000183 4.1e-24 115.2 81 75.3
CSS0028153 Camellia sinensis var. sinensis HOM05D000311 ORTHO05D000183 1.0e-19 100.5 81 66.7
Actinidia23543 Actinidia chinensis HOM05D000311 ORTHO05D000183 1.1e-13 80.5 126 42.1
Actinidia02870 Actinidia chinensis HOM05D000311 ORTHO05D000183 1.2e-12 77.0 126 41.3
CSS0008959 Camellia sinensis var. sinensis HOM05D000311 ORTHO05D000183 8.1e-12 74.3 65 61.5
Actinidia26343 Actinidia chinensis HOM05D000311 ORTHO05D000183 6.8e-11 71.2 126 38.9
Actinidia23544 Actinidia chinensis HOM05D000311 ORTHO05D000183 9.8e-10 67.4 96 44.8
Potri.003G013700 Populus trichocarpa HOM05D000311 ORTHO05D000183 1.7e-09 66.6 129 37.2
Dinv41536 Davidia involucrata HOM05D000311 ORTHO05D000183 2.2e-09 66.2 145 33.8
CSS0030458 Camellia sinensis var. sinensis HOM05D000311 ORTHO05D000183 2.9e-09 65.9 45 68.9
Duzib019G0001 Durio zibethinus HOM05D000311 ORTHO05D000183 2.9e-09 65.9 134 33.6
Dinv42933 Davidia involucrata HOM05D000311 ORTHO05D000183 1.4e-08 63.5 144 34.0
Dinv43167 Davidia involucrata HOM05D000311 ORTHO05D000183 1.4e-08 63.5 144 34.0
Gorai.005G031700 Gossypium raimondii HOM05D000311 ORTHO05D000183 1.6e-07 60.1 126 31.7
Nitab4.5_0009518g0030 Nicotiana tabacum HOM05D000311 ORTHO05D000183 7.8e-07 57.8 126 30.2
Gohir.D02G027100 Gossypium hirsutum HOM05D000311 ORTHO05D000183 1.0e-06 57.4 165 27.9
Rhsim01G0024100 Rhododendron simsii HOM05D000311 ORTHO05D000183 1.3e-06 57.0 106 39.6
TWI34G1219 Tripterygium wilfordii HOM05D000311 ORTHO05D000183 1.3e-06 57.0 147 31.3
TWI14G0374 Tripterygium wilfordii HOM05D000311 ORTHO05D000183 3.0e-06 55.8 148 33.8
Potri.018G120800 Populus trichocarpa HOM05D000311 ORTHO05D000183 5.1e-06 55.1 111 32.4
Duzib212G0651 Durio zibethinus HOM05D000311 ORTHO05D000183 8.6e-06 54.3 128 31.2
Gorai.005G032000 Gossypium raimondii HOM05D000311 ORTHO05D000183 8.6e-06 54.3 105 37.1


User provided reference genes

Program Settings