Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0038993 Camellia sinensis var. sinensis HOM05D005957 ORTHO05D007318 3.2e-62 241.5 115 100.0
Hma1.2p1_0119F.1_g056870 Hydrangea macrophylla HOM05D005957 ORTHO05D007318 3.5e-45 184.9 114 75.4
Peaxi162Scf01692g00003 Petunia axillaris HOM05D005957 ORTHO05D007318 1.5e-43 179.5 114 75.4
Nitab4.5_0007927g0010 Nicotiana tabacum HOM05D005957 ORTHO05D007318 2.5e-43 178.7 109 78.0
Nitab4.5_0000002g0080 Nicotiana tabacum HOM05D005957 ORTHO05D007318 4.8e-42 174.5 109 75.2
Dinv04837 Davidia involucrata HOM05D005957 ORTHO05D007318 1.8e-41 172.6 105 74.3
Nitab4.5_0002091g0020 Nicotiana tabacum HOM05D005957 ORTHO05D007318 3.1e-41 171.8 115 67.8
CAN.G1872.4 Capsicum annuum HOM05D005957 ORTHO05D007318 5.3e-41 171.0 115 71.3
PGSC0003DMG400046061 Solanum tuberosum HOM05D005957 ORTHO05D007318 6.9e-41 170.6 115 75.7
Oeu064677.1 Olea europaea HOM05D005957 ORTHO05D007318 4.5e-40 167.9 114 69.3
Peaxi162Scf00390g00049 Petunia axillaris HOM05D005957 ORTHO05D007318 5.8e-40 167.5 115 70.4
Cfa011817 Carpinus fangiana HOM05D005957 ORTHO05D007318 7.6e-40 167.2 115 69.6
Solyc01g090870.1 Solanum lycopersicum HOM05D005957 ORTHO05D007318 9.9e-40 166.8 115 73.0
Sopen01g036610 Solanum pennellii HOM05D005957 ORTHO05D007318 9.9e-40 166.8 115 73.0
Haze_24453 Corylus avellana HOM05D005957 ORTHO05D007318 2.2e-39 165.6 115 68.7
Lsat_1_v5_gn_0_40840 Lactuca sativa HOM05D005957 ORTHO05D007318 2.2e-39 165.6 108 72.2
Solyc06g082450.1 Solanum lycopersicum HOM05D005957 ORTHO05D007318 2.2e-39 165.6 114 67.5
GSVIVG01024580001 Vitis vinifera HOM05D005957 ORTHO05D007318 2.2e-39 165.6 110 71.8
Cc01_g15210 Coffea canephora HOM05D005957 ORTHO05D007318 2.9e-39 165.2 109 71.6
vmacro02888 Vaccinium macrocarpon HOM05D005957 ORTHO05D007318 3.8e-39 164.9 115 72.2
Sopen06g033830 Solanum pennellii HOM05D005957 ORTHO05D007318 4.9e-39 164.5 109 70.6
Rhsim13G0060900 Rhododendron simsii HOM05D005957 ORTHO05D007318 1.4e-38 162.9 107 75.7
Sabra13G0125100 Salix brachista HOM05D005957 ORTHO05D007318 1.4e-38 162.9 110 71.8
Potri.013G155300 Populus trichocarpa HOM05D005957 ORTHO05D007318 7.1e-38 160.6 110 70.0
Thecc.09G362300 Theobroma cacao HOM05D005957 ORTHO05D007318 7.1e-38 160.6 115 67.8
Duzib168G0649 Durio zibethinus HOM05D005957 ORTHO05D007318 2.7e-37 158.7 117 65.8
QL01p025125 Quercus lobata HOM05D005957 ORTHO05D007318 3.5e-37 158.3 114 65.8
MSTRG.17909 Avicennia marina HOM05D005957 ORTHO05D007318 6.0e-37 157.5 110 63.6
TAR623G0423 Trochodendron aralioides HOM05D005957 ORTHO05D007318 6.0e-37 157.5 109 69.7
ECA236G1285 Erigeron canadensis HOM05D005957 ORTHO05D007318 1.0e-36 156.8 113 66.4
Atru.chr1.2524 Acer truncatum HOM05D005957 ORTHO05D007318 1.3e-36 156.4 122 64.8
TWI79G1455 Tripterygium wilfordii HOM05D005957 ORTHO05D007318 2.3e-36 155.6 110 68.2
Potri.019G128400 Populus trichocarpa HOM05D005957 ORTHO05D007318 3.0e-36 155.2 110 66.4
COL.COLO4_11196 Corchorus olitorius HOM05D005957 ORTHO05D007318 6.7e-36 154.1 112 67.9
Sabra19G0126000 Salix brachista HOM05D005957 ORTHO05D007318 6.7e-36 154.1 110 66.4
CANSAT54G0691 Cannabis sativa HOM05D005957 ORTHO05D007318 1.9e-35 152.5 113 68.1
HanXRQChr01g0028631 Helianthus annuus HOM05D005957 ORTHO05D007318 1.9e-35 152.5 113 66.4
HanXRQChr17g0565391 Helianthus annuus HOM05D005957 ORTHO05D007318 2.5e-35 152.1 111 67.6
Ah.08g217120 Amaranthus hybridus HOM05D005957 ORTHO05D007318 3.3e-35 151.8 103 66.0
Nitab4.5_0002759g0020 Nicotiana tabacum HOM05D005957 ORTHO05D007318 5.6e-35 151.0 115 63.5
Prupe.6G042800 Prunus persica HOM05D005957 ORTHO05D007318 9.6e-35 150.2 113 65.5
Manes.18G139500 Manihot esculenta HOM05D005957 ORTHO05D007318 3.7e-34 148.3 116 65.5
Psat2g052120 Pisum sativum HOM05D005957 ORTHO05D007318 3.7e-34 148.3 109 66.1
Cpa.g.sc2.317 Carica papaya HOM05D005957 ORTHO05D007318 4.8e-34 147.9 110 65.5
Dinv28722 Davidia involucrata HOM05D005957 ORTHO05D007318 6.2e-34 147.5 91 78.0
RcHm_v2.0_Chr5g0072641 Rosa chinensis HOM05D005957 ORTHO05D007318 6.2e-34 147.5 105 68.6
CiPaw.14G051700 Carya illinoinensis HOM05D005957 ORTHO05D007318 1.4e-33 146.4 109 67.0
FAN21G1009 Fragaria x ananassa HOM05D005957 ORTHO05D007318 1.8e-33 146.0 105 66.7
LjContig00141g0008224 Lotus japonicus HOM05D005957 ORTHO05D007318 4.0e-33 144.8 90 75.6
FvH4_3g40300 Fragaria vesca HOM05D005957 ORTHO05D007318 5.3e-33 144.4 105 65.7
FAN11G2330 Fragaria x ananassa HOM05D005957 ORTHO05D007318 5.3e-33 144.4 105 65.7
FAN16G3236 Fragaria x ananassa HOM05D005957 ORTHO05D007318 5.3e-33 144.4 105 65.7
SGA_v2.0_scaffold77G25368 Striga asiatica HOM05D005957 ORTHO05D007318 5.3e-33 144.4 113 61.9
Sed0019639 Sechium edule HOM05D005957 ORTHO05D007318 9.0e-33 143.7 114 64.0
Migut.N00743 Erythranthe guttata HOM05D005957 ORTHO05D007318 1.2e-32 143.3 115 60.0
FAN25G1085 Fragaria x ananassa HOM05D005957 ORTHO05D007318 1.5e-32 142.9 106 67.9
Glyma.14G203500 Glycine max HOM05D005957 ORTHO05D007318 2.0e-32 142.5 109 67.0
Glyma.02G235500 Glycine max HOM05D005957 ORTHO05D007318 2.6e-32 142.1 109 66.1
CiPaw.13G065100 Carya illinoinensis HOM05D005957 ORTHO05D007318 7.6e-32 140.6 115 60.9
Ca_05700_v3 Cicer arietinum L. HOM05D005957 ORTHO05D007318 7.6e-32 140.6 108 65.7
Ca_30026_v3 Cicer arietinum L. HOM05D005957 ORTHO05D007318 7.6e-32 140.6 108 65.7
Nn5g26879 Nelumbo nucifera HOM05D005957 ORTHO05D007318 7.6e-32 140.6 109 64.2
MD11G1055300 Malus domestica HOM05D005957 ORTHO05D007318 1.0e-31 140.2 113 62.8
MBI03_g02190_MAGBIO Magnolia biondii HOM05D005957 ORTHO05D007318 1.3e-31 139.8 113 61.1
Migut.D00827 Erythranthe guttata HOM05D005957 ORTHO05D007318 1.7e-31 139.4 103 64.1
Aqoxy2G00718 Aquilegia oxysepala HOM05D005957 ORTHO05D007318 2.2e-31 139.0 109 59.6
EL10Ac7g16454 Beta vulgaris HOM05D005957 ORTHO05D007318 2.2e-31 139.0 100 64.0
TPR.G25771 Trifolium pratense HOM05D005957 ORTHO05D007318 2.2e-31 139.0 107 66.4
Gohir.D05G134050 Gossypium hirsutum HOM05D005957 ORTHO05D007318 2.9e-31 138.7 124 58.1
Gorai.009G137600 Gossypium raimondii HOM05D005957 ORTHO05D007318 3.8e-31 138.3 124 58.1
Medtr5g075190 Medicago truncatula HOM05D005957 ORTHO05D007318 4.9e-31 137.9 105 66.7
SalBow6G3501 Salvia bowleyana HOM05D005957 ORTHO05D007318 8.4e-31 137.1 105 66.7
Gohir.A05G129400 Gossypium hirsutum HOM05D005957 ORTHO05D007318 1.1e-30 136.7 124 58.1
Oeu011373.1 Olea europaea HOM05D005957 ORTHO05D007318 3.2e-30 135.2 110 60.0
Dinv12270 Davidia involucrata HOM05D005957 ORTHO05D007318 5.5e-30 134.4 86 72.1
MD03G1053700 Malus domestica HOM05D005957 ORTHO05D007318 7.1e-30 134.0 113 60.2
CsaV3_6G019090 Cucumis sativus L. HOM05D005957 ORTHO05D007318 1.2e-29 133.3 117 57.3
Lalb_Chr17g0345591 Lupinus albus HOM05D005957 ORTHO05D007318 1.2e-29 133.3 110 60.9
VMungo0647G0754 Vigna mungo HOM05D005957 ORTHO05D007318 2.7e-29 132.1 96 67.7
Ciclev10003853m.g Citrus clementina HOM05D005957 ORTHO05D007318 6.0e-29 131.0 85 72.9
ClCG02G019100 Citrullus lanatus HOM05D005957 ORTHO05D007318 1.3e-28 129.8 69 82.6
Phvul.008G248400 Phaseolus vulgaris HOM05D005957 ORTHO05D007318 2.3e-28 129.0 106 62.3
Phvul.006G076900 Phaseolus vulgaris HOM05D005957 ORTHO05D007318 3.0e-28 128.6 118 52.5
PSO017G7297 Papaver somniferum HOM05D005957 ORTHO05D007318 3.3e-27 125.2 94 64.9
PSO170G5428 Papaver somniferum HOM05D005957 ORTHO05D007318 4.3e-27 124.8 94 64.9
MELO3C026874.2 Cucumis melo HOM05D005957 ORTHO05D007318 1.3e-26 123.2 64 84.4
Eucgr.J01842 Eucalyptus grandis HOM05D005957 ORTHO05D007318 8.2e-26 120.6 110 56.4
THA.LOC104800785 Tarenaya hassleriana HOM05D005957 ORTHO05D007318 2.4e-25 119.0 111 55.9
ATR0681G143 Amborella trichopoda HOM05D005957 ORTHO05D007318 6.9e-25 117.5 106 57.5
PGR119G2032 Punica granatum HOM05D005957 ORTHO05D007318 1.5e-24 116.3 59 88.1
Carub.0004s1155 Capsella rubella HOM05D005957 ORTHO05D007318 2.6e-24 115.5 106 55.7
Sc21g0004870 Simmondsia chinensis HOM05D005957 ORTHO05D007318 4.5e-24 114.8 106 52.8
CARHR123750 Cardamine hirsuta HOM05D005957 ORTHO05D007318 5.9e-24 114.4 104 55.8
AL4G25260 Arabidopsis lyrata HOM05D005957 ORTHO05D007318 7.6e-24 114.0 90 58.9
BcaC02g11133 Brassica carinata HOM05D005957 ORTHO05D007318 1.7e-23 112.8 110 54.5
AT2G30395 Arabidopsis thaliana HOM05D005957 ORTHO05D007318 2.9e-23 112.1 90 58.9
BolC4t23551H Brassica oleracea HOM05D005957 ORTHO05D007318 3.8e-23 111.7 110 53.6
DCAR_023195 Daucus carota HOM05D005957 ORTHO05D007318 3.8e-23 111.7 64 71.9
Sp4g12950 Schrenkiella parvula HOM05D005957 ORTHO05D007318 3.8e-23 111.7 106 52.8
C04p20120 Brassica napus HOM05D005957 ORTHO05D007318 5.0e-23 111.3 110 53.6
Aa31LG5G6330 Aethionema arabicum HOM05D005957 ORTHO05D007318 8.4e-23 110.5 91 59.3
A05p15090 Brassica napus HOM05D005957 ORTHO05D007318 8.4e-23 110.5 106 53.8
Ah.15g095100 Amaranthus hybridus HOM05D005957 ORTHO05D007318 3.2e-22 108.6 82 59.8
BcaB02g10322 Brassica carinata HOM05D005957 ORTHO05D007318 3.2e-22 108.6 111 53.2
Thhalv10017867m.g Eutrema salsugineum HOM05D005957 ORTHO05D007318 4.2e-22 108.2 91 58.2
BraA05t20430Z Brassica rapa HOM05D005957 ORTHO05D007318 1.6e-21 106.3 109 52.3
AUR62007156 Chenopodium quinoa HOM05D003140 ORTHO05D003851 4.6e-21 104.8 109 46.8
Thhalv10017852m.g Eutrema salsugineum HOM05D005957 ORTHO05D007318 1.3e-20 103.2 91 58.2
Os05g0328300 Oryza sativa ssp. japonica HOM05D005957 ORTHO05D007318 1.3e-20 103.2 67 70.1
BcaB06g28364 Brassica carinata HOM05D005957 ORTHO05D007318 1.8e-20 102.8 120 47.5
A04p23170 Brassica napus HOM05D005957 ORTHO05D007318 8.7e-20 100.5 88 53.4
Os07g0679100 Oryza sativa ssp. japonica HOM05D005957 ORTHO05D007318 1.5e-19 99.8 70 64.3
Thhalv10009633m.g Eutrema salsugineum HOM05D005957 ORTHO05D007318 1.9e-19 99.4 82 51.2
AT1G06923 Arabidopsis thaliana HOM05D005957 ORTHO05D007318 3.3e-19 98.6 88 46.6
BraA04t17844Z Brassica rapa HOM05D005957 ORTHO05D007318 3.3e-19 98.6 88 52.3
CARHR006600 Cardamine hirsuta HOM05D005957 ORTHO05D007318 3.3e-19 98.6 80 52.5
Carub.0001s0622 Capsella rubella HOM05D005957 ORTHO05D007318 4.3e-19 98.2 66 59.1
AL1G16950 Arabidopsis lyrata HOM05D005957 ORTHO05D007318 7.4e-19 97.4 87 47.1
BcaC02g08022 Brassica carinata HOM05D005957 ORTHO05D007318 7.4e-19 97.4 88 52.3
C04p59320 Brassica napus HOM05D005957 ORTHO05D007318 7.4e-19 97.4 88 52.3
BolC4t27440H Brassica oleracea HOM05D005957 ORTHO05D007318 7.4e-19 97.4 88 52.3
Zm00001eb350230 Zea mays HOM05D005957 ORTHO05D007318 1.3e-18 96.7 98 49.0
Sp1g05630 Schrenkiella parvula HOM05D005957 ORTHO05D007318 2.4e-17 92.4 64 57.8
Zm00001eb330630 Zea mays HOM05D005957 ORTHO05D007318 2.4e-17 92.4 66 62.1
BcaC07g42550 Brassica carinata HOM05D005957 ORTHO05D007318 9.0e-17 90.5 67 53.7
BcaC07g42036 Brassica carinata HOM05D005957 ORTHO05D007318 6.5e-15 84.3 67 52.2
BcaC07g42037 Brassica carinata HOM05D005957 ORTHO05D007318 6.5e-15 84.3 67 52.2
C08p50900 Brassica napus HOM05D005957 ORTHO05D007318 6.5e-15 84.3 67 52.2
BolC8t52618H Brassica oleracea HOM05D005957 ORTHO05D007318 6.5e-15 84.3 67 52.2
A09p66670 Brassica napus HOM05D005957 ORTHO05D007318 8.5e-15 84.0 62 56.5
BraA09t42007Z Brassica rapa HOM05D005957 ORTHO05D007318 8.5e-15 84.0 62 56.5
SEGI_34718 Sequoiadendron giganteum HOM05D005957 ORTHO05D007318 5.9e-08 61.2 61 41.0


User provided reference genes

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