Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0038985 Camellia sinensis var. sinensis HOM05D000963 ORTHO05D010201 3.2e-22 107.5 51 100.0
Lsat_1_v5_gn_0_29380 Lactuca sativa HOM05D000963 ORTHO05D010201 1.9e-14 81.6 43 88.4
Lsat_1_v5_gn_2_98400 Lactuca sativa HOM05D000963 ORTHO05D010201 3.2e-14 80.9 43 88.4
Lsat_1_v5_gn_4_147701 Lactuca sativa HOM05D000963 ORTHO05D010201 3.2e-14 80.9 43 88.4
Lsat_1_v5_gn_4_147881 Lactuca sativa HOM05D000963 ORTHO05D010201 3.2e-14 80.9 43 88.4
Lsat_1_v5_gn_5_181901 Lactuca sativa HOM05D000963 ORTHO05D004715 3.2e-14 80.9 43 88.4
Lsat_1_v5_gn_9_39260 Lactuca sativa HOM05D000963 ORTHO05D010201 3.2e-14 80.9 43 88.4
Lsat_1_v5_gn_2_20500 Lactuca sativa HOM05D000963 ORTHO05D010201 4.2e-14 80.5 42 88.1
BraSC138t45526Z Brassica rapa HOM05D000963 ORTHO05D010201 5.4e-14 80.1 43 88.4
BraSC143t45649Z Brassica rapa HOM05D000963 ORTHO05D010201 5.4e-14 80.1 43 88.4
BraSC25t45902Z Brassica rapa HOM05D000963 ORTHO05D010201 5.4e-14 80.1 43 88.4
Lsat_1_v5_gn_5_4701 Lactuca sativa HOM05D000963 ORTHO05D004715 1.6e-13 78.6 43 86.0
Lsat_1_v5_gn_6_94280 Lactuca sativa HOM05D000963 ORTHO05D010201 1.6e-13 78.6 43 86.0
Atru.chr11.485 Acer truncatum HOM05D000003 ORTHO05D010201 2.1e-13 78.2 43 83.7
QL05p067011 Quercus lobata HOM05D000074 ORTHO05D001262 2.1e-13 78.2 42 85.7
QL93p1338_0001 Quercus lobata HOM05D000963 ORTHO05D010201 2.1e-13 78.2 42 85.7
DCAR_031888 Daucus carota HOM05D000963 ORTHO05D010201 2.7e-13 77.8 42 83.3
Gohir.D12G052550 Gossypium hirsutum HOM05D000963 ORTHO05D010201 2.7e-13 77.8 43 86.0
GSVIVG01004896001 Vitis vinifera HOM05D000963 ORTHO05D010201 2.7e-13 77.8 43 81.4
SHI36393 Sapria himalayana HOM05D000963 ORTHO05D010201 3.5e-13 77.4 39 92.3
CDE02G2524 Ceratophyllum demersum HOM05D000963 ORTHO05D010201 4.6e-13 77.0 42 85.7
FAN28G1706 Fragaria x ananassa HOM05D000963 ORTHO05D010201 4.6e-13 77.0 43 83.7
ECA074G0007 Erigeron canadensis HOM05D000963 ORTHO05D004715 6.0e-13 76.6 42 85.7
ECA074G0008 Erigeron canadensis HOM05D000963 ORTHO05D004715 6.0e-13 76.6 42 85.7
Migut.D01397 Erythranthe guttata HOM05D000963 ORTHO05D010201 7.8e-13 76.3 43 83.7
PGSC0003DMG402008784 Solanum tuberosum HOM05D000963 ORTHO05D010201 7.8e-13 76.3 43 83.7
PGSC0003DMG400039021 Solanum tuberosum HOM05D000963 ORTHO05D010201 1.0e-12 75.9 42 83.3
Gorai.008G055700 Gossypium raimondii HOM05D000963 ORTHO05D010201 1.7e-12 75.1 43 81.4
Nitab4.5_0002363g0010 Nicotiana tabacum HOM05D000963 ORTHO05D010201 1.7e-12 75.1 43 83.7
Sc16g0004780 Simmondsia chinensis HOM05D000963 ORTHO05D010201 3.0e-12 74.3 42 81.0
Oeu053980.2 Olea europaea HOM05D000963 ORTHO05D010201 3.9e-12 73.9 43 79.1
Nitab4.5_0000085g0180 Nicotiana tabacum HOM05D000963 ORTHO05D010201 4.3e-11 70.5 42 76.2
Oeu015125.1 Olea europaea HOM05D000963 ORTHO05D010201 4.3e-11 70.5 41 80.5
Sed0024925 Sechium edule HOM05D000963 ORTHO05D010201 4.3e-11 70.5 39 84.6
unitig_87.g27918 Utricularia gibba HOM05D000963 ORTHO05D010201 4.3e-11 70.5 43 79.1
unitig_87.g28034 Utricularia gibba HOM05D000963 ORTHO05D010201 4.3e-11 70.5 43 79.1
unitig_91.g26521 Utricularia gibba HOM05D000963 ORTHO05D010201 4.3e-11 70.5 43 79.1
unitig_91.g26528 Utricularia gibba HOM05D000963 ORTHO05D005131 5.6e-11 70.1 42 78.6
Migut.N02360 Erythranthe guttata HOM05D000963 ORTHO05D010201 7.3e-11 69.7 41 80.5
arahy.Tifrunner.gnm1.ann1.6MMU9N Arachis hypogaea HOM05D000963 ORTHO05D010201 1.6e-10 68.6 38 84.2
arahy.Tifrunner.gnm1.ann1.A86CS8 Arachis hypogaea HOM05D000963 ORTHO05D010201 1.6e-10 68.6 38 84.2
arahy.Tifrunner.gnm1.ann1.AH21CB Arachis hypogaea HOM05D000963 ORTHO05D010658 1.6e-10 68.6 38 84.2
arahy.Tifrunner.gnm1.ann1.JP0X74 Arachis hypogaea HOM05D000963 ORTHO05D010201 1.6e-10 68.6 38 84.2
Gohir.A02G134101 Gossypium hirsutum HOM05D000963 ORTHO05D004715 1.6e-10 68.6 38 84.2
Gohir.D03G074976 Gossypium hirsutum HOM05D000963 ORTHO05D004715 1.6e-10 68.6 38 84.2
Oeu015131.2 Olea europaea HOM05D000963 ORTHO05D004715 6.2e-10 66.6 42 71.4
Ca_23046_v3 Cicer arietinum L. HOM05D000963 ORTHO05D010658 8.1e-10 66.2 41 73.2
Gorai.005G170600 Gossypium raimondii HOM05D000963 ORTHO05D010201 1.1e-09 65.9 43 74.4
Lsat_1_v5_gn_3_5060 Lactuca sativa HOM05D000963 ORTHO05D010201 3.1e-09 64.3 41 75.6
Nitab4.5_0000924g0010 Nicotiana tabacum HOM05D000963 ORTHO05D010201 1.3e-07 58.9 37 75.7
Nitab4.5_0007400g0050 Nicotiana tabacum HOM05D000963 ORTHO05D010201 1.3e-07 58.9 37 78.4
arahy.Tifrunner.gnm1.ann1.QQ6I31 Arachis hypogaea HOM05D000963 ORTHO05D010201 6.4e-07 56.6 37 73.0
Nitab4.5_0006632g0010 Nicotiana tabacum HOM05D000963 ORTHO05D010201 1.1e-06 55.8 39 66.7


User provided reference genes

Program Settings