Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0038956 Camellia sinensis var. sinensis HOM05D007186 ORTHO05D008970 3.2e-98 361.7 176 100.0
Dinv07835 Davidia involucrata HOM05D007186 ORTHO05D008970 9.5e-66 253.8 173 73.4
Rhsim06G0171800 Rhododendron simsii HOM05D007186 ORTHO05D008970 6.1e-65 251.1 152 78.3
Peaxi162Scf00147g01818 Petunia axillaris HOM05D007186 ORTHO05D008970 5.0e-59 231.5 166 68.1
FvH4_6g41490 Fragaria vesca HOM05D007186 ORTHO05D008970 8.6e-59 230.7 165 69.7
RcHm_v2.0_Chr2g0157151 Rosa chinensis HOM05D007186 ORTHO05D008970 8.6e-59 230.7 165 70.9
FAN05G2361 Fragaria x ananassa HOM05D007186 ORTHO05D008970 2.5e-58 229.2 165 69.7
COL.COLO4_06941 Corchorus olitorius HOM05D007186 ORTHO05D008970 3.3e-58 228.8 163 67.5
FAN09G3526 Fragaria x ananassa HOM05D007186 ORTHO05D008970 3.3e-58 228.8 165 70.9
Nitab4.5_0011275g0030 Nicotiana tabacum HOM05D007186 ORTHO05D008970 3.3e-58 228.8 166 69.3
Gohir.D07G195800 Gossypium hirsutum HOM05D007186 ORTHO05D008970 5.6e-58 228.0 156 70.5
Gorai.001G219300 Gossypium raimondii HOM05D007186 ORTHO05D008970 1.6e-57 226.5 156 69.9
Atru.chr6.3329 Acer truncatum HOM05D007186 ORTHO05D008970 1.4e-56 223.4 166 65.1
QL08p029418 Quercus lobata HOM05D007186 ORTHO05D008970 1.4e-56 223.4 168 65.5
Potri.014G162700 Populus trichocarpa HOM05D007186 ORTHO05D008970 4.0e-56 221.9 165 64.2
Nitab4.5_0002877g0030 Nicotiana tabacum HOM05D007186 ORTHO05D008970 6.8e-56 221.1 165 66.7
Sopen05g025420 Solanum pennellii HOM05D007186 ORTHO05D008970 8.9e-56 220.7 166 65.7
PSO675G5362 Papaver somniferum HOM05D007186 ORTHO05D008970 2.0e-55 219.5 165 64.8
Prupe.3G204800 Prunus persica HOM05D007186 ORTHO05D008970 2.0e-55 219.5 164 65.9
Solyc05g041430.3 Solanum lycopersicum HOM05D007186 ORTHO05D008970 2.6e-55 219.2 166 65.1
Ciclev10016992m.g Citrus clementina HOM05D007186 ORTHO05D008970 3.4e-55 218.8 165 66.7
Hma1.2p1_0133F.1_g061060 Hydrangea macrophylla HOM05D007186 ORTHO05D008970 7.5e-55 217.6 136 77.2
PGSC0003DMG400030273 Solanum tuberosum HOM05D007186 ORTHO05D008970 9.8e-55 217.2 154 69.5
TAR624G0839 Trochodendron aralioides HOM05D007186 ORTHO05D008970 1.3e-54 216.9 173 64.7
Actinidia07891 Actinidia chinensis HOM05D007186 ORTHO05D008970 1.7e-54 216.5 146 76.7
AUR62015089 Chenopodium quinoa HOM05D007186 ORTHO05D008970 1.7e-54 216.5 157 65.6
AUR62044229 Chenopodium quinoa HOM05D007186 ORTHO05D008970 1.7e-54 216.5 157 65.6
AUR62044345 Chenopodium quinoa HOM05D007186 ORTHO05D008970 1.7e-54 216.5 157 65.6
TWI36G0211 Tripterygium wilfordii HOM05D007186 ORTHO05D008970 1.7e-54 216.5 166 64.5
GSVIVG01030422001 Vitis vinifera HOM05D007186 ORTHO05D008970 2.9e-54 215.7 154 66.9
CiPaw.04G194300 Carya illinoinensis HOM05D007186 ORTHO05D008970 3.7e-54 215.3 151 70.2
CANSAT54G2500 Cannabis sativa HOM05D007186 ORTHO05D008970 4.9e-54 214.9 155 66.5
AUR62017547 Chenopodium quinoa HOM05D007186 ORTHO05D008970 4.9e-54 214.9 157 65.0
Sabra14G0124100 Salix brachista HOM05D007186 ORTHO05D008970 6.4e-54 214.5 169 62.7
PGR142G1014 Punica granatum HOM05D007186 ORTHO05D008970 1.4e-53 213.4 164 64.0
Eucgr.K00670 Eucalyptus grandis HOM05D007186 ORTHO05D008970 2.4e-53 212.6 155 67.1
MD09G1119400 Malus domestica HOM05D007186 ORTHO05D008970 3.2e-53 212.2 168 63.7
Phvul.008G287400 Phaseolus vulgaris HOM05D007186 ORTHO05D008970 3.0e-51 205.7 165 63.6
CsaV3_6G009340 Cucumis sativus L. HOM05D007186 ORTHO05D008970 5.0e-51 204.9 152 65.1
VMungo0647G1315 Vigna mungo HOM05D007186 ORTHO05D008970 6.6e-51 204.5 151 66.2
MELO3C019365.2 Cucumis melo HOM05D007186 ORTHO05D008970 2.5e-50 202.6 166 62.0
Glyma.02G307400 Glycine max HOM05D007186 ORTHO05D008970 3.3e-50 202.2 167 62.3
TPR.G15068 Trifolium pratense HOM05D007186 ORTHO05D008970 5.6e-50 201.4 151 64.2
Duzib138G0377 Durio zibethinus HOM05D007186 ORTHO05D008970 1.6e-49 199.9 149 66.4
Medtr5g097970 Medicago truncatula HOM05D007186 ORTHO05D008970 1.1e-48 197.2 153 62.1
Aqoxy1G02832 Aquilegia oxysepala HOM05D007186 ORTHO05D008970 2.3e-48 196.1 149 62.4
ECA240G1183 Erigeron canadensis HOM05D007186 ORTHO05D008970 3.1e-48 195.7 153 64.1
Hund24136 Selenicereus undatus HOM05D007186 ORTHO05D008970 6.8e-48 194.5 167 56.3
Lsat_1_v5_gn_9_105540 Lactuca sativa HOM05D007186 ORTHO05D008970 1.2e-47 193.7 152 64.5
HanXRQChr03g0075731 Helianthus annuus HOM05D007186 ORTHO05D008970 1.5e-47 193.4 154 64.9
Psat2g003840 Pisum sativum HOM05D007186 ORTHO05D008970 2.6e-47 192.6 150 61.3
THA.LOC104808856 Tarenaya hassleriana HOM05D007186 ORTHO05D008970 2.6e-47 192.6 148 62.8
unitig_578.g16640 Utricularia gibba HOM05D007186 ORTHO05D008970 5.8e-47 191.4 150 58.0
Haze_12721 Corylus avellana HOM05D007186 ORTHO05D008970 9.8e-47 190.7 230 47.0
MBI19_g06151_MAGBIO Magnolia biondii HOM05D007186 ORTHO05D008970 2.2e-46 189.5 133 69.2
Lalb_Chr04g0247191 Lupinus albus HOM05D007186 ORTHO05D008970 1.1e-45 187.2 146 61.0
LjContig00081g0025535 Lotus japonicus HOM05D000229 ORTHO05D008970 3.2e-45 185.7 166 57.2
Manes.13G063846 Manihot esculenta HOM05D007186 ORTHO05D008970 7.0e-45 184.5 138 63.0
ClCG02G009490 Citrullus lanatus HOM05D007186 ORTHO05D008970 2.7e-44 182.6 209 48.8
AL3G42380 Arabidopsis lyrata HOM05D007186 ORTHO05D008970 4.6e-44 181.8 166 57.2
Thhalv10002690m.g Eutrema salsugineum HOM05D007186 ORTHO05D008970 6.0e-44 181.4 152 57.9
arahy.Tifrunner.gnm1.ann1.HI5B62 Arachis hypogaea HOM05D007186 ORTHO05D008970 1.3e-43 180.3 152 56.6
Carub.0003s2639 Capsella rubella HOM05D007186 ORTHO05D008970 3.9e-43 178.7 162 56.2
CARHR102760 Cardamine hirsuta HOM05D007186 ORTHO05D008970 6.6e-43 177.9 149 57.7
AUR62044292 Chenopodium quinoa HOM05D007186 ORTHO05D008970 8.6e-43 177.6 155 56.8
arahy.Tifrunner.gnm1.ann1.CRYT1U Arachis hypogaea HOM05D007186 ORTHO05D008970 2.5e-42 176.0 162 54.3
HPP92_022801 Vanilla planifolia HOM05D007186 ORTHO05D008970 7.3e-42 174.5 148 56.1
Lj8A132T57 Lonicera japonica HOM05D007186 ORTHO05D008970 1.2e-41 173.7 165 56.4
Sp3g23400 Schrenkiella parvula HOM05D007186 ORTHO05D008970 1.6e-41 173.3 155 54.2
C03p55060 Brassica napus HOM05D007186 ORTHO05D008970 2.1e-41 172.9 160 55.0
BolC3t17781H Brassica oleracea HOM05D007186 ORTHO05D008970 2.1e-41 172.9 160 55.0
BcaC01g03189 Brassica carinata HOM05D007186 ORTHO05D008970 8.1e-41 171.0 160 55.0
Migut.M00010 Erythranthe guttata HOM05D007186 ORTHO05D008970 1.1e-40 170.6 152 59.2
ATR0712G003 Amborella trichopoda HOM05D007186 ORTHO05D008970 1.8e-40 169.9 141 58.9
Oeu040479.1 Olea europaea HOM05D007186 ORTHO05D008970 2.6e-39 166.0 113 71.7
Sed0024069 Sechium edule HOM05D007186 ORTHO05D008970 1.3e-38 163.7 145 55.9
BcaC01g03185 Brassica carinata HOM05D007186 ORTHO05D008970 4.9e-38 161.8 155 53.5
SalBow7G1582 Salvia bowleyana HOM05D000037 ORTHO05D000150 4.9e-38 161.8 148 56.8
Glyma.14G005600 Glycine max HOM05D007186 ORTHO05D008970 6.4e-38 161.4 136 59.6
Zm00001eb245650 Zea mays HOM05D007186 ORTHO05D008970 3.2e-37 159.1 149 55.0
BcaB08g34487 Brassica carinata HOM05D007186 ORTHO05D008970 4.1e-37 158.7 143 53.8
A03p44430 Brassica napus HOM05D007186 ORTHO05D008970 5.4e-37 158.3 155 51.0
BolC3t17784H Brassica oleracea HOM05D007186 ORTHO05D008970 5.4e-37 158.3 155 52.9
BraA03t13576Z Brassica rapa HOM05D007186 ORTHO05D008970 5.4e-37 158.3 165 50.3
vmacro12130 Vaccinium macrocarpon HOM05D007186 ORTHO05D008970 8.6e-35 151.0 170 55.9
C03p55120 Brassica napus HOM05D007186 ORTHO05D008970 1.5e-34 150.2 142 53.5
BcaC01g03187 Brassica carinata HOM05D007186 ORTHO05D008970 1.6e-33 146.7 130 53.8
Aa31sc53G20 Aethionema arabicum HOM05D007186 ORTHO05D006113 2.1e-33 146.4 148 49.3
SEGI_21441 Sequoiadendron giganteum HOM05D007186 ORTHO05D008970 2.1e-33 146.4 148 48.6
DCAR_032166 Daucus carota HOM05D000693 ORTHO05D008970 8.1e-33 144.4 111 61.3
Os02g0588600 Oryza sativa ssp. japonica HOM05D007186 ORTHO05D008970 8.9e-32 141.0 155 48.4
FAN14G0401 Fragaria x ananassa HOM05D007186 ORTHO05D008970 1.6e-28 130.2 102 66.7
Gohir.A07G189700 Gossypium hirsutum HOM05D007186 ORTHO05D008970 1.0e-27 127.5 85 75.3
Thecc.01G185600 Theobroma cacao HOM05D007186 ORTHO05D008970 1.3e-27 127.1 92 73.9
EL10Ac9g22768 Beta vulgaris HOM05D007186 ORTHO05D008970 5.1e-27 125.2 86 69.8
FAN02G3692 Fragaria x ananassa HOM05D007186 ORTHO05D008970 4.3e-26 122.1 98 67.3
Sc20g0003870 Simmondsia chinensis HOM05D007186 ORTHO05D008970 1.4e-24 117.1 81 63.0
MSTRG.6661 Avicennia marina HOM05D007186 ORTHO05D008970 9.9e-23 110.9 90 65.6
Pp3c15_5880 Physcomitrium patens HOM05D007186 ORTHO05D008970 6.4e-22 108.2 141 42.6
arahy.Tifrunner.gnm1.ann1.I316DY Arachis hypogaea HOM05D007186 ORTHO05D008970 1.9e-21 106.7 88 53.4
Nn1g07413 Nelumbo nucifera HOM05D007186 ORTHO05D008970 3.2e-21 105.9 74 63.5
Eucgr.K00669 Eucalyptus grandis HOM05D007186 ORTHO05D008970 1.2e-20 104.0 74 60.8
arahy.Tifrunner.gnm1.ann1.ZIY68Y Arachis hypogaea HOM05D007186 ORTHO05D008970 3.0e-19 99.4 85 52.9
Mapoly0123s0026 Marchantia polymorpha HOM05D007186 ORTHO05D008970 1.1e-18 97.4 146 36.3
AUR62025215 Chenopodium quinoa HOM05D007186 ORTHO05D008970 2.5e-18 96.3 68 69.1
SMO364G0535 Selaginella moellendorffii HOM05D007186 ORTHO05D008970 2.8e-17 92.8 140 35.7
arahy.Tifrunner.gnm1.ann1.5R4F72 Arachis hypogaea HOM05D007186 ORTHO05D008970 2.9e-14 82.8 106 41.5
Sopen05g025410 Solanum pennellii HOM05D007186 ORTHO05D008970 1.6e-12 77.0 88 47.7
AT2G04790 Arabidopsis thaliana HOM05D007186 ORTHO05D008970 1.3e-09 67.4 60 65.0
MD17G1110300 Malus domestica HOM05D007186 ORTHO05D008970 5.3e-08 62.0 44 72.7
Thhalv10002943m.g Eutrema salsugineum HOM05D007186 ORTHO05D008970 1.2e-07 60.8 72 40.3


User provided reference genes

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