Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0038929 Camellia sinensis var. sinensis HOM05D007227 ORTHO05D002252 9.0e-107 390.2 187 100.0
CSS0026369 Camellia sinensis var. sinensis HOM05D007227 ORTHO05D002252 2.0e-42 176.4 88 93.2
CSS0037950 Camellia sinensis var. sinensis HOM05D007227 ORTHO05D002252 2.0e-13 80.1 94 53.2
Dinv23539 Davidia involucrata HOM05D007227 ORTHO05D002252 3.4e-13 79.3 83 49.4
Dinv42073 Davidia involucrata HOM05D007227 ORTHO05D002252 4.4e-13 79.0 102 48.0
GSVIVG01031940001 Vitis vinifera HOM05D007227 ORTHO05D002252 2.9e-12 76.3 118 34.7
Rhsim11G0174800 Rhododendron simsii HOM05D007227 ORTHO05D002252 6.0e-10 68.6 72 45.8
Glyma.12G044400 Glycine max HOM05D007227 ORTHO05D002252 2.5e-08 63.2 86 36.0
Lsat_1_v5_gn_9_109540 Lactuca sativa HOM05D007227 ORTHO05D002252 3.3e-08 62.8 67 41.8
Lj3g0002713 Lotus japonicus HOM05D007227 ORTHO05D002252 3.3e-08 62.8 65 41.5
Phvul.011G046400 Phaseolus vulgaris HOM05D007227 ORTHO05D002252 4.3e-08 62.4 59 47.5
Glyma.06G013300 Glycine max HOM05D007227 ORTHO05D002252 5.6e-08 62.0 85 37.6
Oeu014341.1 Olea europaea HOM05D007227 ORTHO05D002252 5.6e-08 62.0 58 44.8
CiPaw.05G063200 Carya illinoinensis HOM05D007227 ORTHO05D002252 1.2e-07 60.8 65 41.5
MSTRG.20093 Avicennia marina HOM05D007227 ORTHO05D002252 2.1e-07 60.1 95 31.6
Glyma.11G119200 Glycine max HOM05D007227 ORTHO05D002252 2.1e-07 60.1 59 44.1
Glyma.04G013400 Glycine max HOM05D007227 ORTHO05D002252 2.8e-07 59.7 88 35.2
LjContig00081g0025580 Lotus japonicus HOM05D007227 ORTHO05D002252 3.6e-07 59.3 79 34.2
Lalb_Chr23g0265441 Lupinus albus HOM05D007227 ORTHO05D002252 4.7e-07 58.9 99 34.3
QL11p043287 Quercus lobata HOM05D007227 ORTHO05D002252 4.7e-07 58.9 59 47.5
MSTRG.27703 Avicennia marina HOM05D007227 ORTHO05D002252 6.2e-07 58.5 67 44.8
CiPaw.06G136700 Carya illinoinensis HOM05D007227 ORTHO05D002252 8.1e-07 58.2 82 39.0
Gorai.002G211000 Gossypium raimondii HOM05D007227 ORTHO05D002252 8.1e-07 58.2 99 36.4
Lalb_Chr19g0138601 Lupinus albus HOM05D007227 ORTHO05D002252 8.1e-07 58.2 82 36.6
Lj9C368G9 Lonicera japonica HOM05D007227 ORTHO05D002252 1.1e-06 57.8 63 41.3
Sabra04G0101600 Salix brachista HOM05D007227 ORTHO05D002252 1.1e-06 57.8 58 48.3
Gohir.D01G169400 Gossypium hirsutum HOM05D007227 ORTHO05D002252 1.4e-06 57.4 75 40.0
VMungo1127G0518 Vigna mungo HOM05D007227 ORTHO05D002252 1.8e-06 57.0 85 35.3
Actinidia00511 Actinidia chinensis HOM05D007227 ORTHO05D002252 2.4e-06 56.6 63 46.0
Gohir.A01G178500 Gossypium hirsutum HOM05D007227 ORTHO05D002252 2.4e-06 56.6 75 40.0
Cfa005018 Carpinus fangiana HOM05D007227 ORTHO05D002252 3.1e-06 56.2 81 35.8
arahy.Tifrunner.gnm1.ann1.16ZZBQ Arachis hypogaea HOM05D007227 ORTHO05D002252 5.2e-06 55.5 81 40.7
Ciclev10029608m.g Citrus clementina HOM05D007227 ORTHO05D002252 5.2e-06 55.5 97 35.1
Cc07_g14570 Coffea canephora HOM05D007227 ORTHO05D002252 5.2e-06 55.5 113 32.7
Glyma.02G300900 Glycine max HOM05D007227 ORTHO05D002252 5.2e-06 55.5 64 37.5
SalBow6G0041 Salvia bowleyana HOM05D007227 ORTHO05D002252 5.2e-06 55.5 49 42.9
SalBow6G1279 Salvia bowleyana HOM05D007227 ORTHO05D002252 5.2e-06 55.5 49 42.9
Potri.004G153200 Populus trichocarpa HOM05D007227 ORTHO05D002252 6.8e-06 55.1 58 44.8
arahy.Tifrunner.gnm1.ann1.ZTQ30L Arachis hypogaea HOM05D007227 ORTHO05D002252 8.9e-06 54.7 68 41.2


User provided reference genes

Program Settings