Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0038924 Camellia sinensis var. sinensis HOM05D052657 ORTHO05D016853 4.7e-59 231.1 125 100.0
CSS0042752 Camellia sinensis var. sinensis HOM05D052657 ORTHO05D016853 5.7e-57 224.2 124 98.4
Haze_06126 Corylus avellana HOM05D007913 ORTHO05D009599 3.9e-13 78.6 118 47.5
TAR371G0046 Trochodendron aralioides HOM05D007913 ORTHO05D009599 9.5e-12 73.9 119 46.2
Peaxi162Scf00382g00034 Petunia axillaris HOM05D016979 ORTHO05D016853 3.6e-11 72.0 123 41.5
Cfa000684 Carpinus fangiana HOM05D008124 ORTHO05D004072 6.8e-10 67.8 128 43.0
Ciclev10033117m.g Citrus clementina HOM05D013794 ORTHO05D009599 1.2e-09 67.0 122 41.8
TAR629G2111 Trochodendron aralioides HOM05D007913 ORTHO05D009599 4.4e-09 65.1 115 43.5
Solyc05g009480.1 Solanum lycopersicum HOM05D016979 ORTHO05D016853 9.9e-09 63.9 127 37.8
QL01p043322 Quercus lobata HOM05D013794 ORTHO05D009599 1.3e-08 63.5 119 46.2
Dinv21097 Davidia involucrata HOM05D007913 ORTHO05D009599 3.7e-08 62.0 69 50.7
CAN.G656.17 Capsicum annuum HOM05D016979 ORTHO05D016853 1.4e-07 60.1 126 41.3
Duzib248G0949 Durio zibethinus HOM05D013794 ORTHO05D009599 1.4e-07 60.1 111 40.5
Potri.008G119900 Populus trichocarpa HOM05D013794 ORTHO05D009599 1.9e-07 59.7 122 39.3
MBI16_g11028_MAGBIO Magnolia biondii HOM05D007913 ORTHO05D009599 2.4e-07 59.3 138 35.5
Sabra08G0090900 Salix brachista HOM05D013794 ORTHO05D009599 2.4e-07 59.3 122 37.7
Duzib268G1152 Durio zibethinus HOM05D013794 ORTHO05D009599 4.1e-07 58.5 124 38.7
TAR374G0796 Trochodendron aralioides HOM05D007913 ORTHO05D009599 4.1e-07 58.5 114 41.2
Eucgr.G02329 Eucalyptus grandis HOM05D007913 ORTHO05D009599 7.1e-07 57.8 117 37.6
Sopen05g005280 Solanum pennellii HOM05D016979 ORTHO05D016853 7.1e-07 57.8 128 41.4
CiPaw.16G064300 Carya illinoinensis HOM05D007913 ORTHO05D009599 1.2e-06 57.0 132 35.6
PGSC0003DMG400014559 Solanum tuberosum HOM05D016979 ORTHO05D016853 1.2e-06 57.0 125 41.6
COL.COLO4_07914 Corchorus olitorius HOM05D007913 ORTHO05D009599 1.6e-06 56.6 123 36.6
RcHm_v2.0_Chr4g0435331 Rosa chinensis HOM05D007913 ORTHO05D009599 1.6e-06 56.6 116 37.9
Hma1.2p1_0061F.1_g034050 Hydrangea macrophylla HOM05D007913 ORTHO05D009599 2.1e-06 56.2 116 41.4
Ciclev10033073m.g Citrus clementina HOM05D007913 ORTHO05D009599 2.7e-06 55.8 122 38.5
MBI10_g16032_MAGBIO Magnolia biondii HOM05D007913 ORTHO05D009599 2.7e-06 55.8 141 35.5
Duzib251G0161 Durio zibethinus HOM05D013794 ORTHO05D009599 3.5e-06 55.5 123 38.2
Thecc.02G356100 Theobroma cacao HOM05D013794 ORTHO05D009599 3.5e-06 55.5 127 38.6
Manes.05G137750 Manihot esculenta HOM05D021252 ORTHO05D012395 7.8e-06 54.3 130 32.3


User provided reference genes

Program Settings