Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0038918 Camellia sinensis var. sinensis HOM05D006772 ORTHO05D008367 8.0e-64 246.9 122 100.0
CSS0016213 Camellia sinensis var. sinensis HOM05D006772 ORTHO05D008367 1.5e-62 242.7 122 97.5
Cc08_g02570 Coffea canephora HOM05D006772 ORTHO05D008367 4.1e-44 181.4 125 72.0
Prupe.5G037100 Prunus persica HOM05D006772 ORTHO05D008367 4.6e-43 177.9 128 70.3
RcHm_v2.0_Chr7g0209491 Rosa chinensis HOM05D006772 ORTHO05D008367 1.7e-42 176.0 128 65.6
QL12p005804 Quercus lobata HOM05D006772 ORTHO05D008367 3.0e-42 175.3 125 71.2
QL12p005837 Quercus lobata HOM05D006772 ORTHO05D008367 6.6e-42 174.1 125 71.2
MD16G1275100 Malus domestica HOM05D006772 ORTHO05D008367 1.9e-41 172.6 127 67.7
Peaxi162Scf00460g00052 Petunia axillaris HOM05D006772 ORTHO05D008367 2.5e-41 172.2 122 70.5
Hma1.2p1_0991F.1_g245070 Hydrangea macrophylla HOM05D006772 ORTHO05D008367 3.3e-41 171.8 124 71.8
FvH4_5g21990 Fragaria vesca HOM05D006772 ORTHO05D008367 7.3e-41 170.6 126 63.5
FAN18G1611 Fragaria x ananassa HOM05D006772 ORTHO05D008367 7.3e-41 170.6 126 63.5
FAN04G3098 Fragaria x ananassa HOM05D006772 ORTHO05D008367 2.8e-40 168.7 126 62.7
Nitab4.5_0001666g0010 Nicotiana tabacum HOM05D006772 ORTHO05D008367 1.1e-39 166.8 122 68.9
FAN08G3182 Fragaria x ananassa HOM05D006772 ORTHO05D008367 1.8e-39 166.0 126 61.9
Rhsim07G0126400 Rhododendron simsii HOM05D006772 ORTHO05D008367 3.1e-39 165.2 120 65.8
PGSC0003DMG400043394 Solanum tuberosum HOM05D006772 ORTHO05D008367 4.0e-39 164.9 122 68.0
Potri.003G091400 Populus trichocarpa HOM05D006772 ORTHO05D008367 8.9e-39 163.7 124 67.7
Sopen08g025600 Solanum pennellii HOM05D006772 ORTHO05D008367 1.2e-38 163.3 122 68.0
COL.COLO4_17058 Corchorus olitorius HOM05D006772 ORTHO05D008367 2.6e-38 162.2 123 66.7
MD06G1033600 Malus domestica HOM05D006772 ORTHO05D008367 3.4e-38 161.8 126 64.3
Solyc08g077020.1 Solanum lycopersicum HOM05D006772 ORTHO05D008367 3.4e-38 161.8 122 67.2
FAN13G1934 Fragaria x ananassa HOM05D006772 ORTHO05D008367 9.9e-38 160.2 119 63.9
Sabra03G0061100 Salix brachista HOM05D006772 ORTHO05D008367 9.9e-38 160.2 124 66.1
TAR375G0733 Trochodendron aralioides HOM05D006772 ORTHO05D008367 9.9e-38 160.2 125 68.8
Lsat_1_v5_gn_6_78680 Lactuca sativa HOM05D006772 ORTHO05D008367 1.7e-37 159.5 134 60.4
Aqoxy3G02398 Aquilegia oxysepala HOM05D006772 ORTHO05D008367 2.2e-37 159.1 124 68.5
Haze_08246 Corylus avellana HOM05D006772 ORTHO05D008367 2.2e-37 159.1 129 67.4
HanXRQChr03g0084031 Helianthus annuus HOM05D006772 ORTHO05D008367 3.7e-37 158.3 130 63.8
Eucgr.E00285 Eucalyptus grandis HOM05D006772 ORTHO05D008367 6.4e-37 157.5 129 64.3
Thecc.03G229400 Theobroma cacao HOM05D006772 ORTHO05D008367 6.4e-37 157.5 125 63.2
Sabra01G0111500 Salix brachista HOM05D006772 ORTHO05D008367 1.4e-36 156.4 125 63.2
Cfa012424 Carpinus fangiana HOM05D006772 ORTHO05D008367 3.2e-36 155.2 128 64.1
Manes.17G012000 Manihot esculenta HOM05D006772 ORTHO05D008367 3.2e-36 155.2 130 66.9
Potri.001G142700 Populus trichocarpa HOM05D006772 ORTHO05D008367 3.2e-36 155.2 125 64.0
Nn6g33607 Nelumbo nucifera HOM05D006772 ORTHO05D008367 4.1e-36 154.8 120 65.8
Duzib205G2036 Durio zibethinus HOM05D006772 ORTHO05D008367 5.4e-36 154.5 126 65.9
CANSAT21G2446 Cannabis sativa HOM05D006772 ORTHO05D008367 2.7e-35 152.1 134 59.0
CiPaw.12G062700 Carya illinoinensis HOM05D006772 ORTHO05D008367 2.7e-35 152.1 131 63.4
Nitab4.5_0000804g0080 Nicotiana tabacum HOM05D006772 ORTHO05D008367 3.5e-35 151.8 127 63.0
Gohir.D03G170700 Gossypium hirsutum HOM05D006772 ORTHO05D008367 3.9e-34 148.3 122 61.5
Nn1g00537 Nelumbo nucifera HOM05D006772 ORTHO05D008367 6.6e-34 147.5 127 63.8
Sc01g0007510 Simmondsia chinensis HOM05D006772 ORTHO05D008367 6.6e-34 147.5 128 65.6
Gohir.A03G001600 Gossypium hirsutum HOM05D006772 ORTHO05D008367 8.6e-34 147.1 122 63.9
Gorai.003G181100 Gossypium raimondii HOM05D006772 ORTHO05D008367 8.6e-34 147.1 122 61.5
Ciclev10033079m.g Citrus clementina HOM05D006772 ORTHO05D008367 5.6e-33 144.4 124 62.1
arahy.Tifrunner.gnm1.ann1.6N9PAN Arachis hypogaea HOM05D006772 ORTHO05D008367 7.3e-33 144.1 125 57.6
arahy.Tifrunner.gnm1.ann1.WNGN5W Arachis hypogaea HOM05D006772 ORTHO05D008367 7.3e-33 144.1 125 57.6
ECA240G4560 Erigeron canadensis HOM05D000236 ORTHO05D000192 1.2e-32 143.3 127 58.3
Eucgr.D02187 Eucalyptus grandis HOM05D006772 ORTHO05D008367 4.7e-32 141.4 120 62.5
Gohir.A12G208800 Gossypium hirsutum HOM05D006772 ORTHO05D008367 4.0e-31 138.3 122 60.7
Gohir.D12G211500 Gossypium hirsutum HOM05D006772 ORTHO05D008367 4.0e-31 138.3 122 60.7
Gorai.008G227000 Gossypium raimondii HOM05D006772 ORTHO05D008367 4.0e-31 138.3 122 60.7
Lj2g0019736 Lotus japonicus HOM05D006772 ORTHO05D008367 4.0e-31 138.3 133 54.1
Atru.chr6.1734 Acer truncatum HOM05D006772 ORTHO05D008367 5.2e-31 137.9 122 62.3
PGR042G0478 Punica granatum HOM05D006772 ORTHO05D008367 5.2e-31 137.9 130 57.7
Medtr5g014370 Medicago truncatula HOM05D006772 ORTHO05D008367 1.5e-30 136.3 131 52.7
Psat2g173920 Pisum sativum HOM05D006772 ORTHO05D008367 1.5e-30 136.3 133 54.1
Glyma.05G111700 Glycine max HOM05D006772 ORTHO05D008367 2.6e-30 135.6 128 56.2
TWI15G0236 Tripterygium wilfordii HOM05D006772 ORTHO05D008367 2.6e-30 135.6 124 60.5
VMungo1215G2403 Vigna mungo HOM05D006772 ORTHO05D008367 3.4e-30 135.2 128 58.6
Glyma.11G043000 Glycine max HOM05D006772 ORTHO05D008367 5.8e-30 134.4 126 53.2
Sed0022952 Sechium edule HOM05D006772 ORTHO05D008367 9.9e-30 133.7 127 56.7
Lalb_Chr16g0379141 Lupinus albus HOM05D006772 ORTHO05D008367 1.7e-29 132.9 128 53.1
TWI60G0285 Tripterygium wilfordii HOM05D006772 ORTHO05D008367 1.7e-29 132.9 124 58.9
Ca_24649_v3 Cicer arietinum L. HOM05D006772 ORTHO05D008367 2.2e-29 132.5 129 52.7
Glyma.17G155300 Glycine max HOM05D006772 ORTHO05D008367 2.2e-29 132.5 133 52.6
MELO3C003403.2 Cucumis melo HOM05D006772 ORTHO05D008367 8.4e-29 130.6 134 56.0
Ah.12g054950 Amaranthus hybridus HOM05D006772 ORTHO05D008367 1.9e-28 129.4 112 57.1
VMungo0251G2965 Vigna mungo HOM05D006772 ORTHO05D008367 1.9e-28 129.4 132 53.0
Sed0027084 Sechium edule HOM05D006772 ORTHO05D008367 4.2e-28 128.3 129 57.4
DCAR_024967 Daucus carota HOM05D006772 ORTHO05D008367 5.4e-28 127.9 129 57.4
PGSC0003DMG400036785 Solanum tuberosum HOM05D006772 ORTHO05D008367 7.1e-28 127.5 116 60.3
Lalb_Chr05g0213971 Lupinus albus HOM05D006772 ORTHO05D008367 1.6e-27 126.3 127 49.6
MBI02_g14426_MAGBIO Magnolia biondii HOM05D006772 ORTHO05D008367 1.6e-27 126.3 104 67.3
CsaV3_3G049240 Cucumis sativus L. HOM05D006772 ORTHO05D008367 2.1e-27 125.9 134 52.2
Phvul.002G006800 Phaseolus vulgaris HOM05D006772 ORTHO05D008367 2.1e-27 125.9 130 52.3
THA.LOC104807956 Tarenaya hassleriana HOM05D006772 ORTHO05D008367 2.1e-27 125.9 121 54.5
Gohir.A11G030300 Gossypium hirsutum HOM05D006772 ORTHO05D008367 1.3e-26 123.2 129 51.2
TPR.G7824 Trifolium pratense HOM05D006772 ORTHO05D008367 5.1e-26 121.3 124 53.2
A05p10490 Brassica napus HOM05D006772 ORTHO05D008367 1.1e-25 120.2 123 52.0
BraA05t19987Z Brassica rapa HOM05D006772 ORTHO05D008367 1.1e-25 120.2 123 52.0
MBI05_g46462_MAGBIO Magnolia biondii HOM05D006772 ORTHO05D008367 1.9e-25 119.4 115 55.7
BolC4t22934H Brassica oleracea HOM05D006772 ORTHO05D008367 2.5e-25 119.0 123 51.2
Lj4g0015139 Lotus japonicus HOM05D006772 ORTHO05D008367 3.3e-25 118.6 132 47.7
BcaB02g09453 Brassica carinata HOM05D006772 ORTHO05D008367 1.3e-24 116.7 123 50.4
BcaB02g09458 Brassica carinata HOM05D006772 ORTHO05D008367 1.3e-24 116.7 123 50.4
BcaB02g09462 Brassica carinata HOM05D006772 ORTHO05D008367 1.3e-24 116.7 123 50.4
BcaC02g11632 Brassica carinata HOM05D006772 ORTHO05D008367 1.3e-24 116.7 123 50.4
C04p12890 Brassica napus HOM05D006772 ORTHO05D008367 1.3e-24 116.7 123 50.4
CDE02G2078 Ceratophyllum demersum HOM05D004438 ORTHO05D005256 2.1e-24 115.9 119 52.9
CDE08G0662 Ceratophyllum demersum HOM05D006772 ORTHO05D008367 2.8e-24 115.5 118 54.2
Lj4g0019114 Lotus japonicus HOM05D006772 ORTHO05D008367 8.1e-24 114.0 136 47.8
Dinv28946 Davidia involucrata HOM05D006772 ORTHO05D008367 1.4e-23 113.2 76 72.4
BcaB02g09448 Brassica carinata HOM05D006772 ORTHO05D008367 1.8e-23 112.8 123 45.5
Thhalv10017432m.g Eutrema salsugineum HOM05D006772 ORTHO05D008367 4.0e-23 111.7 123 48.0
AT2G35290 Arabidopsis thaliana HOM05D006772 ORTHO05D008367 5.3e-23 111.3 124 49.2
CARHR129440 Cardamine hirsuta HOM05D006772 ORTHO05D008367 1.2e-22 110.2 124 49.2
Sp4g17500 Schrenkiella parvula HOM05D006772 ORTHO05D008367 1.2e-22 110.2 123 44.7
C04p64260 Brassica napus HOM05D006772 ORTHO05D008367 3.4e-22 108.6 123 45.5
A04p26870 Brassica napus HOM05D006772 ORTHO05D008367 5.8e-22 107.8 123 45.5
BraA04t18187Z Brassica rapa HOM05D006772 ORTHO05D008367 5.8e-22 107.8 123 45.5
CiPaw.11G092300 Carya illinoinensis HOM05D006772 ORTHO05D008367 9.9e-22 107.1 123 52.0
Carub.0004s1698 Capsella rubella HOM05D006772 ORTHO05D008367 1.3e-21 106.7 122 48.4
Aa31LG9G15310 Aethionema arabicum HOM05D006772 ORTHO05D008367 2.9e-21 105.5 125 48.0
PGR031G2239 Punica granatum HOM05D006772 ORTHO05D008367 3.8e-21 105.1 92 59.8
ATR0564G457 Amborella trichopoda HOM05D006772 ORTHO05D008367 1.1e-20 103.6 135 45.2
AL4G31320 Arabidopsis lyrata HOM05D006772 ORTHO05D008367 1.1e-20 103.6 104 51.9
BcaB06g28837 Brassica carinata HOM05D006772 ORTHO05D008367 1.1e-20 103.6 123 45.5
BcaC02g07718 Brassica carinata HOM05D006772 ORTHO05D008367 1.4e-20 103.2 123 43.9
BolC4t27910H Brassica oleracea HOM05D006772 ORTHO05D008367 1.4e-20 103.2 123 43.9
Os03g0170100 Oryza sativa ssp. japonica HOM05D006772 ORTHO05D008367 9.3e-20 100.5 110 55.5
Zm00001eb402290 Zea mays HOM05D006772 ORTHO05D008367 6.0e-19 97.8 109 51.4
HPP92_011259 Vanilla planifolia HOM05D006772 ORTHO05D008367 3.9e-18 95.1 122 45.1
Gohir.D11G028900 Gossypium hirsutum HOM05D006772 ORTHO05D008367 3.3e-17 92.0 103 48.5
Peaxi162Scf00102g00514 Petunia axillaris HOM05D006772 ORTHO05D008367 1.3e-16 90.1 121 44.6
SEGI_37864 Sequoiadendron giganteum HOM05D006772 ORTHO05D008367 3.6e-16 88.6 105 43.8
EL10Ac5g12135 Beta vulgaris HOM05D003523 ORTHO05D008367 9.9e-14 80.5 91 48.4
Gorai.007G031500 Gossypium raimondii HOM05D006772 ORTHO05D008367 6.4e-13 77.8 92 45.7
SEGI_18606 Sequoiadendron giganteum HOM05D006772 ORTHO05D008367 1.2e-11 73.6 106 40.6
MBI02_g18931_MAGBIO Magnolia biondii HOM05D006772 ORTHO05D008367 2.1e-11 72.8 104 49.0
Mapoly0047s0021 Marchantia polymorpha HOM05D001618 ORTHO05D001486 1.5e-06 56.6 105 32.4


User provided reference genes

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