Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0038886 Camellia sinensis var. sinensis HOM05D007108 ORTHO05D009128 2.2e-154 548.9 272 100.0
CSS0020358 Camellia sinensis var. sinensis HOM05D007108 ORTHO05D009128 3.3e-142 508.4 253 99.2
Actinidia29517 Actinidia chinensis HOM05D007108 ORTHO05D009128 8.4e-114 414.1 248 82.7
Thecc.08G146100 Theobroma cacao HOM05D007108 ORTHO05D009128 1.3e-109 400.2 246 78.9
Gohir.A05G242100 Gossypium hirsutum HOM05D007108 ORTHO05D009128 3.7e-109 398.7 251 78.5
TAR628G0410 Trochodendron aralioides HOM05D007108 ORTHO05D009128 3.7e-109 398.7 246 80.5
Gohir.D05G243400 Gossypium hirsutum HOM05D007108 ORTHO05D009128 4.8e-109 398.3 251 78.5
Duzib116G0089 Durio zibethinus HOM05D007108 ORTHO05D009128 6.3e-109 397.9 247 78.9
GSVIVG01010051001 Vitis vinifera HOM05D007108 ORTHO05D009128 8.2e-109 397.5 246 79.7
Nn5g28655 Nelumbo nucifera HOM05D007108 ORTHO05D009128 1.8e-108 396.4 255 76.9
Gorai.009G252700 Gossypium raimondii HOM05D007108 ORTHO05D009128 5.3e-108 394.8 251 77.7
Prupe.8G021900 Prunus persica HOM05D007108 ORTHO05D009128 1.3e-106 390.2 215 84.7
Ciclev10002261m.g Citrus clementina HOM05D007108 ORTHO05D009128 2.9e-106 389.0 247 75.3
TWI34G1539 Tripterygium wilfordii HOM05D007108 ORTHO05D009128 8.5e-106 387.5 252 76.6
Haze_17721 Corylus avellana HOM05D007108 ORTHO05D009128 1.9e-105 386.3 256 76.2
MSTRG.1369 Avicennia marina HOM05D007108 ORTHO05D009128 7.2e-105 384.4 258 74.8
Migut.C01030 Erythranthe guttata HOM05D007108 ORTHO05D009128 4.6e-104 381.7 254 74.8
MD05G1017900 Malus domestica HOM05D007108 ORTHO05D009128 1.0e-103 380.6 258 73.3
Glyma.04G239800 Glycine max HOM05D007108 ORTHO05D009128 1.4e-103 380.2 233 77.7
Eucgr.F02729 Eucalyptus grandis HOM05D007108 ORTHO05D009128 1.8e-103 379.8 257 73.9
Manes.18G088801 Manihot esculenta HOM05D007108 ORTHO05D009128 2.3e-103 379.4 259 73.0
Potri.002G071000 Populus trichocarpa HOM05D007108 ORTHO05D009128 3.9e-103 378.6 264 72.3
Peaxi162Scf00263g00613 Petunia axillaris HOM05D007108 ORTHO05D009128 8.8e-103 377.5 251 74.9
CAN.G1564.2 Capsicum annuum HOM05D007108 ORTHO05D009128 1.1e-102 377.1 249 75.9
vmacro13384 Vaccinium macrocarpon HOM05D007108 ORTHO05D009128 1.5e-102 376.7 252 74.6
Rhsim07G0025600 Rhododendron simsii HOM05D007108 ORTHO05D009128 2.0e-102 376.3 250 74.8
Sopen04g026870 Solanum pennellii HOM05D007108 ORTHO05D009128 5.7e-102 374.8 248 76.2
Atru.chr13.2257 Acer truncatum HOM05D007108 ORTHO05D009128 7.4e-102 374.4 247 73.7
Glyma.06G124100 Glycine max HOM05D007108 ORTHO05D009128 7.4e-102 374.4 247 76.1
Oeu000778.2 Olea europaea HOM05D007108 ORTHO05D009128 7.4e-102 374.4 286 67.8
CANSAT25G1119 Cannabis sativa HOM05D007108 ORTHO05D009128 1.3e-101 373.6 260 73.1
QL02p024940 Quercus lobata HOM05D007108 ORTHO05D009128 1.3e-101 373.6 253 75.5
Hma1.2p1_0107F.1_g051540 Hydrangea macrophylla HOM05D007108 ORTHO05D009128 8.2e-101 370.9 219 80.4
Phvul.009G136100 Phaseolus vulgaris HOM05D007108 ORTHO05D009128 8.2e-101 370.9 233 76.4
Aqoxy5G02215 Aquilegia oxysepala HOM05D007108 ORTHO05D009128 1.1e-100 370.5 231 76.6
Cc10_g14220 Coffea canephora HOM05D007108 ORTHO05D009128 1.8e-100 369.8 253 70.8
Lj1g0003350 Lotus japonicus HOM05D007108 ORTHO05D009128 3.1e-100 369.0 255 71.8
Solyc04g064930.3 Solanum lycopersicum HOM05D007108 ORTHO05D009128 3.1e-100 369.0 248 75.0
Sed0009335 Sechium edule HOM05D007108 ORTHO05D009128 1.2e-99 367.1 252 71.8
CARHR021740 Cardamine hirsuta HOM05D007108 ORTHO05D009128 2.6e-99 365.9 229 75.5
COL.COLO4_06005 Corchorus olitorius HOM05D007108 ORTHO05D009128 2.6e-99 365.9 250 73.2
VMungo1309G2491 Vigna mungo HOM05D007108 ORTHO05D009128 5.9e-99 364.8 249 72.7
FvH4_2g14420 Fragaria vesca HOM05D007108 ORTHO05D009128 1.0e-98 364.0 247 72.9
Lalb_Chr11g0066481 Lupinus albus HOM05D007108 ORTHO05D009128 1.0e-98 364.0 216 79.2
ClCG09G009870 Citrullus lanatus HOM05D007108 ORTHO05D009128 2.2e-98 362.8 195 84.6
Lsat_1_v5_gn_9_77661 Lactuca sativa HOM05D007108 ORTHO05D009128 2.2e-98 362.8 237 75.1
Thhalv10008558m.g Eutrema salsugineum HOM05D007108 ORTHO05D009128 3.8e-98 362.1 255 71.8
Aa31LG7G5350 Aethionema arabicum HOM05D007108 ORTHO05D009128 6.5e-98 361.3 252 72.2
CsaV3_7G024840 Cucumis sativus L. HOM05D007108 ORTHO05D009128 1.4e-97 360.1 195 84.1
HanXRQChr16g0500661 Helianthus annuus HOM05D007108 ORTHO05D009128 1.4e-97 360.1 200 83.0
Ca_16662_v3 Cicer arietinum L. HOM05D007108 ORTHO05D009128 2.5e-97 359.4 247 73.7
RcHm_v2.0_Chr6g0276751 Rosa chinensis HOM05D007108 ORTHO05D009128 2.5e-97 359.4 249 71.9
ECA232G2155 Erigeron canadensis HOM05D007108 ORTHO05D009128 3.2e-97 359.0 196 83.2
AL1G34450 Arabidopsis lyrata HOM05D007108 ORTHO05D009128 4.2e-97 358.6 252 71.0
Sc02g0004350 Simmondsia chinensis HOM05D007108 ORTHO05D009128 4.2e-97 358.6 253 70.8
THA.LOC104812052 Tarenaya hassleriana HOM05D007108 ORTHO05D009128 4.2e-97 358.6 257 69.3
Carub.0001s2075 Capsella rubella HOM05D007108 ORTHO05D009128 5.5e-97 358.2 254 70.9
BcaB07g32123 Brassica carinata HOM05D007108 ORTHO05D009128 1.6e-96 356.7 252 70.6
BraA06t24837Z Brassica rapa HOM05D007108 ORTHO05D009128 3.6e-96 355.5 249 71.1
BcaC05g26041 Brassica carinata HOM05D007108 ORTHO05D009128 7.9e-96 354.4 229 74.7
A06p17400 Brassica napus HOM05D007108 ORTHO05D009128 1.0e-95 354.0 252 69.4
AT1G21350 Arabidopsis thaliana HOM05D007108 ORTHO05D009128 3.9e-95 352.1 250 69.6
BolC5t30716H Brassica oleracea HOM05D007108 ORTHO05D009128 5.1e-95 351.7 229 74.2
Cpa.g.sc49.50 Carica papaya HOM05D007108 ORTHO05D009128 8.8e-95 350.9 209 79.9
Nitab4.5_0000299g0220 Nicotiana tabacum HOM05D007108 ORTHO05D009128 8.8e-95 350.9 247 71.7
CDE08G0865 Ceratophyllum demersum HOM05D007108 ORTHO05D009128 1.5e-94 350.1 250 71.2
Medtr3g090490 Medicago truncatula HOM05D007108 ORTHO05D009128 1.5e-94 350.1 247 70.9
Sp1g18900 Schrenkiella parvula HOM05D007108 ORTHO05D009128 2.0e-94 349.7 253 69.2
TPR.G18750 Trifolium pratense HOM05D007108 ORTHO05D009128 2.6e-94 349.4 238 71.4
arahy.Tifrunner.gnm1.ann1.3M80B2 Arachis hypogaea HOM05D007108 ORTHO05D009128 4.8e-93 345.1 213 77.5
DCAR_010274 Daucus carota HOM05D007108 ORTHO05D009128 8.2e-93 344.4 239 69.9
Os07g0260300 Oryza sativa ssp. japonica HOM05D007108 ORTHO05D009128 4.1e-92 342.0 193 80.8
PSO063G1249 Papaver somniferum HOM05D007108 ORTHO05D009128 2.6e-91 339.3 239 69.9
PSO782G4411 Papaver somniferum HOM05D007108 ORTHO05D009128 1.7e-90 336.7 255 67.1
arahy.Tifrunner.gnm1.ann1.QUZ9E8 Arachis hypogaea HOM05D007108 ORTHO05D009128 3.8e-90 335.5 237 70.5
C05p20230 Brassica napus HOM05D007108 ORTHO05D009128 9.4e-89 330.9 229 71.2
EL10Ac1g01484 Beta vulgaris HOM05D007108 ORTHO05D009128 1.2e-88 330.5 261 65.5
CiPaw.16G016700 Carya illinoinensis HOM05D007108 ORTHO05D009128 2.1e-88 329.7 214 74.8
Dinv41114 Davidia involucrata HOM05D007108 ORTHO05D009128 2.3e-87 326.2 210 78.1
SGA_v2.0_scaffold24G10368 Striga asiatica HOM05D007108 ORTHO05D009128 2.6e-86 322.8 242 70.7
ATR1136G010 Amborella trichopoda HOM05D007108 ORTHO05D009128 2.2e-85 319.7 181 81.2
SEGI_12340 Sequoiadendron giganteum HOM05D007108 ORTHO05D009128 3.7e-85 318.9 248 62.9
Actinidia01141 Actinidia chinensis HOM05D007108 ORTHO05D009128 4.5e-83 312.0 199 76.9
FAN20G1168 Fragaria x ananassa HOM05D007108 ORTHO05D009128 4.5e-83 312.0 243 65.8
SEGI_05187 Sequoiadendron giganteum HOM05D007108 ORTHO05D009128 4.2e-81 305.4 205 68.3
AUR62026764 Chenopodium quinoa HOM05D007108 ORTHO05D009128 1.8e-79 300.1 202 71.3
CBR_g41654 Chara braunii HOM05D007108 ORTHO05D009128 1.8e-76 290.0 200 66.5
Pp3c20_22500 Physcomitrium patens HOM05D007108 ORTHO05D009128 2.7e-75 286.2 191 68.1
Psat5g082320 Pisum sativum HOM05D007108 ORTHO05D009128 2.7e-75 286.2 224 65.6
Sabra02G0055700 Salix brachista HOM05D007108 ORTHO05D009128 2.1e-72 276.6 243 62.6
Pp3c23_490 Physcomitrium patens HOM05D007108 ORTHO05D009128 6.1e-72 275.0 175 68.0
AagrBONN_evm.TU.Sc2ySwM_117.292 Anthoceros agrestis HOM05D007108 ORTHO05D009128 3.0e-71 272.7 195 63.6
unitig_26.g9907 Utricularia gibba HOM05D007108 ORTHO05D009128 2.0e-70 270.0 228 62.3
AUR62013508 Chenopodium quinoa HOM05D007108 ORTHO05D009128 5.9e-67 258.5 234 59.8
MELO3C024103.2 Cucumis melo HOM05D007108 ORTHO05D009128 3.6e-64 249.2 136 83.8
SMO228G0194 Selaginella moellendorffii HOM05D007108 ORTHO05D009128 1.0e-63 247.7 148 75.7
SMO347G0599 Selaginella moellendorffii HOM05D007108 ORTHO05D009128 1.2e-56 224.2 176 59.7
FAN15G3050 Fragaria x ananassa HOM05D007108 ORTHO05D009128 2.8e-56 223.0 251 52.2
FAN24G1879 Fragaria x ananassa HOM05D007108 ORTHO05D009128 2.3e-55 219.9 242 52.9
Nitab4.5_0000427g0030 Nicotiana tabacum HOM05D007108 ORTHO05D009128 1.5e-54 217.2 137 75.9
PSO384G3614 Papaver somniferum HOM05D007108 ORTHO05D009128 2.2e-53 213.4 212 54.7
Cre17.g715500 Chlamydomonas reinhardtii HOM05D007108 ORTHO05D009128 9.2e-52 208.0 217 48.4
Lj7A366T74 Lonicera japonica HOM05D007108 ORTHO05D009128 5.6e-49 198.7 200 56.0
Zm00001eb097150 Zea mays HOM05D007108 ORTHO05D009128 8.9e-47 191.4 115 76.5
HanXRQChr03g0063741 Helianthus annuus HOM05D007108 ORTHO05D009128 2.4e-44 183.3 103 77.7
SMO228G0031 Selaginella moellendorffii HOM05D007108 ORTHO05D009128 1.3e-42 177.6 149 53.0
SEGI_19863 Sequoiadendron giganteum HOM05D007108 ORTHO05D009128 2.1e-40 170.2 105 74.3
Psat2g167120 Pisum sativum HOM05D007108 ORTHO05D003402 2.9e-29 133.3 71 87.3
Psat7g065200 Pisum sativum HOM05D007108 ORTHO05D009128 1.3e-26 124.4 70 78.6
Ca_16660_v3 Cicer arietinum L. HOM05D006773 ORTHO05D008775 3.3e-25 119.8 227 39.2
Dinv25820 Davidia involucrata HOM05D007108 ORTHO05D009128 9.6e-17 91.7 60 73.3


User provided reference genes

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