Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0038861 Camellia sinensis var. sinensis HOM05D004656 ORTHO05D005404 2.7e-70 268.5 128 100.0
CSS0025603 Camellia sinensis var. sinensis HOM05D004656 ORTHO05D005404 1.2e-65 253.1 129 96.1
CSS0042439 Camellia sinensis var. sinensis HOM05D004656 ORTHO05D005404 4.2e-63 244.6 129 93.0
CSS0002071 Camellia sinensis var. sinensis HOM05D004656 ORTHO05D005404 6.9e-50 200.7 129 82.2
CSS0023832 Camellia sinensis var. sinensis HOM05D004656 ORTHO05D005404 3.8e-48 194.9 128 81.2
CSS0036547 Camellia sinensis var. sinensis HOM05D004656 ORTHO05D005404 6.9e-42 174.1 129 72.1
CSS0039613 Camellia sinensis var. sinensis HOM05D004656 ORTHO05D005404 1.1e-36 156.8 88 87.5
Dinv39815 Davidia involucrata HOM05D004656 ORTHO05D005404 2.6e-33 145.6 88 79.5
QL03p053091 Quercus lobata HOM05D004656 ORTHO05D005404 3.4e-33 145.2 85 81.2
QL05p081970 Quercus lobata HOM05D004656 ORTHO05D005404 3.4e-33 145.2 85 81.2
vmacro03819 Vaccinium macrocarpon HOM05D004656 ORTHO05D005404 1.7e-32 142.9 84 79.8
TAR626G0166 Trochodendron aralioides HOM05D004656 ORTHO05D005404 8.5e-32 140.6 89 74.2
Duzib160G0757 Durio zibethinus HOM05D004656 ORTHO05D005404 3.2e-31 138.7 89 75.3
Gohir.D10G021600 Gossypium hirsutum HOM05D004656 ORTHO05D005404 5.5e-31 137.9 88 75.0
Potri.004G034900 Populus trichocarpa HOM05D004656 ORTHO05D005404 5.5e-31 137.9 88 76.1
GSVIVG01003202001 Vitis vinifera HOM05D004656 ORTHO05D005404 5.5e-31 137.9 87 77.0
Gohir.A10G020800 Gossypium hirsutum HOM05D004656 ORTHO05D005404 7.2e-31 137.5 88 73.9
Thecc.06G198700 Theobroma cacao HOM05D004656 ORTHO05D005404 9.4e-31 137.1 88 76.1
Nn2g12691 Nelumbo nucifera HOM05D004656 ORTHO05D005404 1.2e-30 136.7 88 72.7
PSO063G3544 Papaver somniferum HOM05D004656 ORTHO05D005404 1.2e-30 136.7 90 72.2
GSVIVG01003206001 Vitis vinifera HOM05D004656 ORTHO05D005404 1.2e-30 136.7 87 75.9
Ciclev10014364m.g Citrus clementina HOM05D004656 ORTHO05D005404 2.1e-30 136.0 86 74.4
Gorai.011G022700 Gossypium raimondii HOM05D004656 ORTHO05D005404 2.1e-30 136.0 88 73.9
TWI38G2153 Tripterygium wilfordii HOM05D004656 ORTHO05D005404 6.1e-30 134.4 89 73.0
CAN.G1181.24 Capsicum annuum HOM05D004656 ORTHO05D005404 1.4e-29 133.3 83 74.7
COL.COLO4_31575 Corchorus olitorius HOM05D004656 ORTHO05D005404 1.4e-29 133.3 83 75.9
Solyc02g079050.3 Solanum lycopersicum HOM05D004656 ORTHO05D005404 2.3e-29 132.5 83 74.7
Atru.chr10.2003 Acer truncatum HOM05D004656 ORTHO05D005404 3.0e-29 132.1 82 76.8
Sopen02g023860 Solanum pennellii HOM05D004656 ORTHO05D005404 3.0e-29 132.1 83 73.5
Cfa000358 Carpinus fangiana HOM05D004656 ORTHO05D005404 3.9e-29 131.7 84 73.8
Haze_06568 Corylus avellana HOM05D004656 ORTHO05D005404 5.1e-29 131.3 84 72.6
MD10G1303000 Malus domestica HOM05D004656 ORTHO05D005404 5.1e-29 131.3 82 75.6
Nitab4.5_0000190g0180 Nicotiana tabacum HOM05D004656 ORTHO05D005404 6.7e-29 131.0 83 73.5
PSO782G2217 Papaver somniferum HOM05D004656 ORTHO05D005404 6.7e-29 131.0 82 74.4
Peaxi162Scf00588g01013 Petunia axillaris HOM05D004656 ORTHO05D005404 6.7e-29 131.0 83 73.5
Glyma.07G190600 Glycine max HOM05D004656 ORTHO05D005404 1.1e-28 130.2 80 77.5
ClCG01G022700 Citrullus lanatus HOM05D004656 ORTHO05D005404 5.7e-28 127.9 84 72.6
Lj2A281G21 Lonicera japonica HOM05D004656 ORTHO05D005404 5.7e-28 127.9 80 75.0
RcHm_v2.0_Chr5g0006531 Rosa chinensis HOM05D004656 ORTHO05D005404 5.7e-28 127.9 82 74.4
VMungo0251G3002 Vigna mungo HOM05D004656 ORTHO05D005404 5.7e-28 127.9 80 76.2
Lalb_Chr05g0218181 Lupinus albus HOM05D004656 ORTHO05D005404 7.4e-28 127.5 80 72.5
Sabra04G0020600 Salix brachista HOM05D004656 ORTHO05D005404 9.7e-28 127.1 88 70.5
Phvul.002G222500 Phaseolus vulgaris HOM05D004656 ORTHO05D005404 2.8e-27 125.6 80 75.0
CiPaw.09G158300 Carya illinoinensis HOM05D004656 ORTHO05D005404 3.7e-27 125.2 87 69.0
Prupe.4G036500 Prunus persica HOM05D004656 ORTHO05D005404 3.7e-27 125.2 82 72.0
Sed0019970 Sechium edule HOM05D004656 ORTHO05D005404 3.7e-27 125.2 86 69.8
CANSAT56G3558 Cannabis sativa HOM05D004656 ORTHO05D005404 6.3e-27 124.4 88 68.2
Lj4g0008048 Lotus japonicus HOM05D004656 ORTHO05D005404 8.2e-27 124.0 80 75.0
FAN16G1451 Fragaria x ananassa HOM05D004656 ORTHO05D005404 1.4e-26 123.2 86 70.9
TPR.G32417 Trifolium pratense HOM05D004656 ORTHO05D005404 1.8e-26 122.9 79 72.2
Medtr4g090990 Medicago truncatula HOM05D004656 ORTHO05D005404 2.4e-26 122.5 79 70.9
MELO3C025319.2 Cucumis melo HOM05D004656 ORTHO05D005404 3.1e-26 122.1 80 71.2
CsaV3_1G030810 Cucumis sativus L. HOM05D004656 ORTHO05D005404 3.1e-26 122.1 80 71.2
FvH4_3g04050 Fragaria vesca HOM05D004656 ORTHO05D005404 3.1e-26 122.1 88 68.2
FAN11G0019 Fragaria x ananassa HOM05D004656 ORTHO05D005404 3.1e-26 122.1 88 68.2
MBI16_g41806_MAGBIO Magnolia biondii HOM05D004656 ORTHO05D005404 3.1e-26 122.1 87 67.8
Manes.15G100000 Manihot esculenta HOM05D004656 ORTHO05D005404 4.1e-26 121.7 90 64.4
Cc02_g12490 Coffea canephora HOM05D004656 ORTHO05D005404 5.3e-26 121.3 80 68.8
DCAR_004136 Daucus carota HOM05D004656 ORTHO05D005404 7.0e-26 120.9 97 63.9
Oeu053939.3 Olea europaea HOM05D004656 ORTHO05D005404 7.0e-26 120.9 80 67.5
Psat7g109640 Pisum sativum HOM05D004656 ORTHO05D005404 7.0e-26 120.9 79 70.9
arahy.Tifrunner.gnm1.ann1.9GFP5H Arachis hypogaea HOM05D004656 ORTHO05D005404 9.1e-26 120.6 81 69.1
FAN25G3623 Fragaria x ananassa HOM05D004656 ORTHO05D005404 9.1e-26 120.6 88 65.9
HanXRQChr17g0551051 Helianthus annuus HOM05D004656 ORTHO05D005404 9.1e-26 120.6 92 64.1
SalBow7G0840 Salvia bowleyana HOM05D004656 ORTHO05D005404 1.2e-25 120.2 97 63.9
Aqoxy7G03085 Aquilegia oxysepala HOM05D004656 ORTHO05D005404 2.0e-25 119.4 86 69.8
Migut.E00415 Erythranthe guttata HOM05D004656 ORTHO05D005404 3.5e-25 118.6 93 64.5
Lsat_1_v5_gn_4_57080 Lactuca sativa HOM05D004656 ORTHO05D005404 3.5e-25 118.6 89 64.0
arahy.Tifrunner.gnm1.ann1.N579TE Arachis hypogaea HOM05D004656 ORTHO05D005404 4.5e-25 118.2 81 67.9
SalBow7G0885 Salvia bowleyana HOM05D004656 ORTHO05D005404 5.9e-25 117.9 97 62.9
Cpa.g.sc27.117 Carica papaya HOM05D004656 ORTHO05D005404 7.7e-25 117.5 77 72.7
AT4G21530 Arabidopsis thaliana HOM05D004656 ORTHO05D005404 1.3e-24 116.7 87 63.2
Thhalv10024471m.g Eutrema salsugineum HOM05D004656 ORTHO05D005404 1.7e-24 116.3 87 62.1
AUR62014723 Chenopodium quinoa HOM05D004656 ORTHO05D005404 2.9e-24 115.5 81 65.4
A01p12840 Brassica napus HOM05D004656 ORTHO05D005404 5.0e-24 114.8 87 60.9
BraA01t01228Z Brassica rapa HOM05D004656 ORTHO05D005404 5.0e-24 114.8 87 60.9
THA.LOC104812734 Tarenaya hassleriana HOM05D004656 ORTHO05D005404 5.0e-24 114.8 81 66.7
AUR62016904 Chenopodium quinoa HOM05D004656 ORTHO05D005404 6.5e-24 114.4 81 65.4
Sc17g0006590 Simmondsia chinensis HOM05D004656 ORTHO05D005404 6.5e-24 114.4 80 66.2
AL7G32500 Arabidopsis lyrata HOM05D004656 ORTHO05D005404 8.5e-24 114.0 80 66.2
Eucgr.E03497 Eucalyptus grandis HOM05D004656 ORTHO05D005404 1.9e-23 112.8 82 64.6
Carub.0007s1989 Capsella rubella HOM05D004656 ORTHO05D005404 2.5e-23 112.5 80 66.2
CARHR228190 Cardamine hirsuta HOM05D004656 ORTHO05D005404 3.2e-23 112.1 83 63.9
Sp7g19640 Schrenkiella parvula HOM05D004656 ORTHO05D005404 4.2e-23 111.7 80 65.0
BcaNung02790 Brassica carinata HOM05D004656 ORTHO05D005404 5.5e-23 111.3 87 59.8
Ca_18485_v3 Cicer arietinum L. HOM05D004656 ORTHO05D005404 5.5e-23 111.3 71 71.8
BcaNung02789 Brassica carinata HOM05D004656 ORTHO05D005404 7.2e-23 110.9 87 59.8
C01p15460 Brassica napus HOM05D004656 ORTHO05D005404 7.2e-23 110.9 87 59.8
BolC1t01500H Brassica oleracea HOM05D004656 ORTHO05D005404 7.2e-23 110.9 87 59.8
ATR0580G317 Amborella trichopoda HOM05D004656 ORTHO05D005404 8.0e-22 107.5 99 56.6
Eucgr.E01958 Eucalyptus grandis HOM05D004656 ORTHO05D005404 8.0e-22 107.5 82 62.2
PGR042G3654 Punica granatum HOM05D004656 ORTHO05D005404 8.0e-22 107.5 83 61.4
Aa31LG6G3550 Aethionema arabicum HOM05D004656 ORTHO05D005404 1.0e-21 107.1 80 63.8
EL10Ac8g20612 Beta vulgaris HOM05D004656 ORTHO05D005404 1.4e-21 106.7 83 60.2
CDE02G2476 Ceratophyllum demersum HOM05D004656 ORTHO05D005404 1.8e-21 106.3 80 63.8
Nitab4.5_0003574g0090 Nicotiana tabacum HOM05D004656 ORTHO05D005404 2.3e-21 105.9 60 81.7
HPP92_015366 Vanilla planifolia HOM05D004656 ORTHO05D005404 3.0e-21 105.5 97 52.6
BcaC09g51334 Brassica carinata HOM05D004656 ORTHO05D005404 1.7e-19 99.8 80 57.5
BcaC09g51337 Brassica carinata HOM05D004656 ORTHO05D005404 1.7e-19 99.8 80 57.5
BcaC09g51339 Brassica carinata HOM05D004656 ORTHO05D005404 1.7e-19 99.8 80 57.5
SGA_v2.0_scaffold92G28242 Striga asiatica HOM05D004656 ORTHO05D005404 4.8e-19 98.2 69 66.7
CSS0033314 Camellia sinensis var. sinensis HOM05D003145 ORTHO05D003586 8.2e-19 97.4 63 79.4
CSS0037848 Camellia sinensis var. sinensis HOM05D003145 ORTHO05D003586 8.2e-19 97.4 63 79.4
Zm00001eb192820 Zea mays HOM05D004656 ORTHO05D005404 1.1e-18 97.1 93 48.4
SHI02118 Sapria himalayana HOM05D004656 ORTHO05D005404 4.1e-18 95.1 82 54.9
ECA234G0402 Erigeron canadensis HOM05D004656 ORTHO05D005404 9.1e-18 94.0 79 60.8
MELO3C008912.2 Cucumis melo HOM05D004656 ORTHO05D005404 1.2e-17 93.6 55 78.2
Zm00001eb125490 Zea mays HOM05D004656 ORTHO05D005404 2.2e-16 89.4 83 50.6
unitig_8.g3351 Utricularia gibba HOM05D004656 ORTHO05D005404 2.9e-16 89.0 109 46.8
Zm00001eb384090 Zea mays HOM05D004656 ORTHO05D005404 9.4e-15 84.0 82 50.0
Eucgr.D02667 Eucalyptus grandis HOM05D004656 ORTHO05D005404 3.6e-14 82.0 55 69.1
Eucgr.L00388 Eucalyptus grandis HOM05D004656 ORTHO05D005404 3.6e-14 82.0 60 63.3
Eucgr.E03552 Eucalyptus grandis HOM05D004656 ORTHO05D005404 6.8e-13 77.8 55 65.5
Eucgr.E03560 Eucalyptus grandis HOM05D004656 ORTHO05D005404 2.0e-12 76.3 55 63.6
Eucgr.C00011 Eucalyptus grandis HOM05D004656 ORTHO05D005404 2.6e-12 75.9 55 63.6
Eucgr.E03557 Eucalyptus grandis HOM05D004656 ORTHO05D005404 7.5e-12 74.3 61 55.7
Mapoly0038s0098 Marchantia polymorpha HOM05D004656 ORTHO05D005404 6.3e-11 71.2 87 42.5
Pp3c19_17530 Physcomitrium patens HOM05D004656 ORTHO05D005404 8.3e-11 70.9 100 40.0
CBR_g50890 Chara braunii HOM05D004656 ORTHO05D000048 7.7e-09 64.3 93 38.7
AagrBONN_evm.TU.Sc2ySwM_117.1500 Anthoceros agrestis HOM05D004656 ORTHO05D005404 1.0e-08 63.9 80 42.5
CSS0022791 Camellia sinensis var. sinensis HOM05D003145 ORTHO05D003586 1.0e-08 63.9 64 53.1
SMO119G0264 Selaginella moellendorffii HOM05D004656 ORTHO05D005404 4.2e-07 58.5 82 41.5


User provided reference genes

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