Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0038837 Camellia sinensis var. sinensis HOM05D000421 ORTHO05D013979 4.0e-29 130.6 59 100.0
CSS0040605 Camellia sinensis var. sinensis HOM05D000421 ORTHO05D000855 1.0e-11 72.8 39 87.2
CSS0031057 Camellia sinensis var. sinensis HOM05D000421 ORTHO05D000855 2.1e-09 65.1 39 79.5
Actinidia03721 Actinidia chinensis HOM05D000421 ORTHO05D000855 6.1e-09 63.5 39 74.4
Actinidia24110 Actinidia chinensis HOM05D000421 ORTHO05D000855 6.1e-09 63.5 39 76.9
TAR633G2505 Trochodendron aralioides HOM05D000421 ORTHO05D000855 6.1e-09 63.5 39 76.9
Dinv05956 Davidia involucrata HOM05D000421 ORTHO05D000855 7.9e-09 63.2 39 76.9
TAR369G1045 Trochodendron aralioides HOM05D000421 ORTHO05D000855 1.0e-08 62.8 39 76.9
Hma1.2p1_0058F.1_g032390 Hydrangea macrophylla HOM05D000421 ORTHO05D000855 3.0e-08 61.2 37 78.4
vmacro03206 Vaccinium macrocarpon HOM05D000421 ORTHO05D000855 8.8e-08 59.7 39 71.8
Cc01_g10970 Coffea canephora HOM05D000421 ORTHO05D000855 3.3e-07 57.8 39 66.7
Cc08_g04320 Coffea canephora HOM05D006937 ORTHO05D013979 7.4e-07 56.6 39 64.1
CsaV3_6G013980 Cucumis sativus L. HOM05D000421 ORTHO05D000855 7.4e-07 56.6 39 66.7
CiPaw.14G082400 Carya illinoinensis HOM05D000421 ORTHO05D000855 9.7e-07 56.2 37 70.3
Nitab4.5_0001939g0060 Nicotiana tabacum HOM05D000421 ORTHO05D000855 1.3e-06 55.8 37 70.3
Peaxi162Scf00270g00111 Petunia axillaris HOM05D000421 ORTHO05D000855 1.3e-06 55.8 37 70.3
Sed0020187 Sechium edule HOM05D000421 ORTHO05D000855 1.3e-06 55.8 39 66.7
EL10Ac9g22542 Beta vulgaris HOM05D000421 ORTHO05D000855 1.7e-06 55.5 39 64.1
Nitab4.5_0000106g0270 Nicotiana tabacum HOM05D000421 ORTHO05D000855 1.7e-06 55.5 37 70.3
Nitab4.5_0003910g0020 Nicotiana tabacum HOM05D000421 ORTHO05D000855 1.7e-06 55.5 37 70.3
Rhsim13G0095400 Rhododendron simsii HOM05D000421 ORTHO05D000855 1.7e-06 55.5 39 66.7
CAN.G631.38 Capsicum annuum HOM05D000421 ORTHO05D000855 2.2e-06 55.1 37 70.3
PGSC0003DMG400008086 Solanum tuberosum HOM05D000421 ORTHO05D000855 2.2e-06 55.1 37 70.3
ClCG02G021230 Citrullus lanatus HOM05D000421 ORTHO05D000855 2.8e-06 54.7 39 64.1
Cc00_g19610 Coffea canephora HOM05D000421 ORTHO05D013979 2.8e-06 54.7 39 64.1
MELO3C025779.2 Cucumis melo HOM05D000587 ORTHO05D001561 2.8e-06 54.7 39 64.1
ECA238G1762 Erigeron canadensis HOM05D000421 ORTHO05D000855 2.8e-06 54.7 39 64.1
FvH4_3g31900 Fragaria vesca HOM05D000421 ORTHO05D000855 2.8e-06 54.7 37 67.6
FAN11G3696 Fragaria x ananassa HOM05D000421 ORTHO05D000855 2.8e-06 54.7 37 67.6
HanXRQChr14g0452671 Helianthus annuus HOM05D000421 ORTHO05D000855 2.8e-06 54.7 39 64.1
QL01p021770 Quercus lobata HOM05D000421 ORTHO05D000855 2.8e-06 54.7 37 67.6
QL01p021834 Quercus lobata HOM05D000421 ORTHO05D000855 2.8e-06 54.7 37 67.6
Eucgr.B02511 Eucalyptus grandis HOM05D000421 ORTHO05D000855 3.7e-06 54.3 37 67.6
Gohir.A05G104200 Gossypium hirsutum HOM05D000421 ORTHO05D000855 3.7e-06 54.3 39 59.0
Nn2g10823 Nelumbo nucifera HOM05D000421 ORTHO05D000855 3.7e-06 54.3 39 66.7
Oeu004146.1 Olea europaea HOM05D000421 ORTHO05D013979 3.7e-06 54.3 39 61.5
Rhsim12G0109300 Rhododendron simsii HOM05D000421 ORTHO05D000855 3.7e-06 54.3 41 61.0
Dinv32731 Davidia involucrata HOM05D000421 ORTHO05D000855 4.8e-06 53.9 34 73.5
Gorai.009G108200 Gossypium raimondii HOM05D000421 ORTHO05D000855 4.8e-06 53.9 39 59.0
Ah.01g003020 Amaranthus hybridus HOM05D000421 ORTHO05D000855 6.3e-06 53.5 39 61.5
FAN21G3652 Fragaria x ananassa HOM05D000421 ORTHO05D000855 6.3e-06 53.5 37 64.9
FAN25G3381 Fragaria x ananassa HOM05D000421 ORTHO05D000855 6.3e-06 53.5 37 64.9
MSTRG.17787 Avicennia marina HOM05D000421 ORTHO05D000855 8.2e-06 53.1 39 64.1
CAN.G1966.4 Capsicum annuum HOM05D000421 ORTHO05D000855 8.2e-06 53.1 35 68.6
Haze_14761 Corylus avellana HOM05D000421 ORTHO05D000855 8.2e-06 53.1 35 71.4
Migut.N02588 Erythranthe guttata HOM05D000421 ORTHO05D000855 8.2e-06 53.1 35 68.6
Peaxi162Scf00029g01513 Petunia axillaris HOM05D000421 ORTHO05D000855 8.2e-06 53.1 37 64.9
SalBow8G0504 Salvia bowleyana HOM05D000421 ORTHO05D013979 8.2e-06 53.1 39 59.0
PGSC0003DMG400024317 Solanum tuberosum HOM05D000421 ORTHO05D000855 8.2e-06 53.1 37 64.9
SGA_v2.0_scaffold263G46028 Striga asiatica HOM05D000421 ORTHO05D000855 8.2e-06 53.1 39 56.4
unitig_736.g22409 Utricularia gibba HOM05D000421 ORTHO05D000855 8.2e-06 53.1 39 56.4
GSVIVG01025203001 Vitis vinifera HOM05D000421 ORTHO05D000855 8.2e-06 53.1 39 61.5


User provided reference genes

Program Settings