Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0038751 Camellia sinensis var. sinensis HOM05D014961 ORTHO05D010667 5.3e-133 477.6 233 100.0
CSS0040293 Camellia sinensis var. sinensis HOM05D014961 ORTHO05D010667 1.8e-96 356.3 258 71.7
CSS0022263 Camellia sinensis var. sinensis HOM05D014961 ORTHO05D010667 6.8e-96 354.4 257 72.0
CSS0037342 Camellia sinensis var. sinensis HOM05D014961 ORTHO05D010667 1.2e-60 237.3 261 54.0
Actinidia30913 Actinidia chinensis HOM05D014961 ORTHO05D010667 7.2e-37 158.3 290 38.3
Dinv03360 Davidia involucrata HOM05D002010 ORTHO05D001602 3.9e-27 125.9 272 39.3
Actinidia05752 Actinidia chinensis HOM05D014961 ORTHO05D010667 8.8e-27 124.8 345 32.2
Hma1.2p1_0083F.1_g042640 Hydrangea macrophylla HOM05D014961 ORTHO05D010667 1.5e-23 114.0 290 37.6
Dinv17748 Davidia involucrata HOM05D014961 ORTHO05D010667 5.9e-23 112.1 239 38.5
Atru.chr2.648 Acer truncatum HOM05D009433 ORTHO05D010667 6.7e-19 98.6 314 32.5
Potri.013G032900 Populus trichocarpa HOM05D009433 ORTHO05D010667 1.3e-17 94.4 281 31.7
GSVIVG01021903001 Vitis vinifera HOM05D009433 ORTHO05D010667 1.7e-17 94.0 246 33.3
CiPaw.07G009700 Carya illinoinensis HOM05D009433 ORTHO05D010667 3.1e-16 89.7 237 33.8
Rhsim10G0110300 Rhododendron simsii HOM05D000105 ORTHO05D010667 7.0e-16 88.6 103 48.5
Rhsim10G0109900 Rhododendron simsii HOM05D014961 ORTHO05D010667 2.2e-14 83.6 124 42.7
Cc02_g31110 Coffea canephora HOM05D014961 ORTHO05D010667 7.2e-13 78.6 220 30.5
Sabra13G0032700 Salix brachista HOM05D009433 ORTHO05D010667 7.2e-13 78.6 278 32.4
TAR362G0181 Trochodendron aralioides HOM05D009433 ORTHO05D010667 6.1e-12 75.5 247 30.8
Manes.08G126300 Manihot esculenta HOM05D009433 ORTHO05D010667 2.8e-09 66.6 300 26.0
Prupe.6G336600 Prunus persica HOM05D014796 ORTHO05D010667 2.4e-08 63.5 302 25.5
Potri.005G047000 Populus trichocarpa HOM05D009433 ORTHO05D010667 3.1e-08 63.2 210 30.0
Haze_04298 Corylus avellana HOM05D009433 ORTHO05D010667 2.0e-07 60.5 170 37.1
Thecc.05G291900 Theobroma cacao HOM05D009433 ORTHO05D010667 4.5e-07 59.3 343 26.8
Cpa.g.sc117.35 Carica papaya HOM05D009433 ORTHO05D010667 3.8e-06 56.2 115 37.4


User provided reference genes

Program Settings